EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000002743 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 45343 bases
Position: chrKV860275.1:28771248-28816590
Accession: 109249084
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000007689	La	PF05383.17	3.4e-22	1	1
ENSPPRP00000007678	La	PF05383.17	7.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000005465	-	2864	XM_019419380	ENSPPRP00000007689	335 (aa)	XP_019274925	UPI000298DF75
ENSPPRT00000005470	-	1560	XM_019419360	ENSPPRP00000007678	520 (aa)	XP_019274905	-

Gene Model

Click here to download ENSPPRG00000002743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000002743's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000002743	-	98	53.519	ENSPPRG00000009780	LARP1	53	53.519

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000002743	-	100	91.642	ENSG00000138709	LARP1B	100	92.000	Homo_sapiens
ENSPPRG00000002743	-	99	49.642	ENSAPOG00000020101	larp1b	51	48.772	Acanthochromis_polyacanthus
ENSPPRG00000002743	-	100	96.119	ENSAMEG00000002748	LARP1B	100	96.119	Ailuropoda_melanoleuca
ENSPPRG00000002743	-	99	49.408	ENSAOCG00000014268	larp1b	52	51.556	Amphiprion_ocellaris
ENSPPRG00000002743	-	99	51.277	ENSAPEG00000004126	larp1b	50	50.802	Amphiprion_percula
ENSPPRG00000002743	-	99	49.455	ENSATEG00000017849	larp1b	51	49.821	Anabas_testudineus
ENSPPRG00000002743	-	98	64.126	ENSAPLG00000010129	LARP1B	58	64.246	Anas_platyrhynchos
ENSPPRG00000002743	-	98	75.922	ENSACAG00000011338	LARP1B	53	75.922	Anolis_carolinensis
ENSPPRG00000002743	-	98	80.350	ENSANAG00000034618	LARP1B	96	79.456	Aotus_nancymaae
ENSPPRG00000002743	-	100	90.595	ENSBTAG00000012135	LARP1B	99	90.595	Bos_taurus
ENSPPRG00000002743	-	100	92.239	ENSCJAG00000003338	LARP1B	100	92.239	Callithrix_jacchus
ENSPPRG00000002743	-	98	96.657	ENSCAFG00000003831	LARP1B	56	95.312	Canis_familiaris
ENSPPRG00000002743	-	100	96.716	ENSCAFG00020018899	LARP1B	100	96.716	Canis_lupus_dingo
ENSPPRG00000002743	-	100	91.667	ENSCHIG00000023144	LARP1B	100	91.667	Capra_hircus
ENSPPRG00000002743	-	98	86.322	ENSTSYG00000002037	-	93	86.322	Carlito_syrichta
ENSPPRG00000002743	-	76	96.429	ENSCPOG00000034668	-	93	96.429	Cavia_porcellus
ENSPPRG00000002743	-	99	92.216	ENSCCAG00000021948	LARP1B	99	92.216	Cebus_capucinus
ENSPPRG00000002743	-	100	88.955	ENSCATG00000013541	LARP1B	100	88.955	Cercocebus_atys
ENSPPRG00000002743	-	100	87.463	ENSCLAG00000006448	-	100	87.463	Chinchilla_lanigera
ENSPPRG00000002743	-	98	91.541	ENSCSAG00000003582	LARP1B	56	89.300	Chlorocebus_sabaeus
ENSPPRG00000002743	-	98	79.492	ENSCHOG00000005354	LARP1B	58	80.507	Choloepus_hoffmanni
ENSPPRG00000002743	-	99	81.310	ENSCANG00000026958	LARP1B	100	81.310	Colobus_angolensis_palliatus
ENSPPRG00000002743	-	100	91.045	ENSCGRG00001004660	-	100	91.045	Cricetulus_griseus_chok1gshd
ENSPPRG00000002743	-	100	90.746	ENSCGRG00000001914	-	100	90.746	Cricetulus_griseus_crigri
ENSPPRG00000002743	-	97	45.273	ENSCSEG00000013519	larp1b	50	49.091	Cynoglossus_semilaevis
ENSPPRG00000002743	-	99	50.276	ENSCVAG00000005046	larp1b	50	50.441	Cyprinodon_variegatus
ENSPPRG00000002743	-	98	90.881	ENSDNOG00000018765	-	100	89.628	Dasypus_novemcinctus
ENSPPRG00000002743	-	98	43.130	ENSEBUG00000003668	larp1b	55	43.576	Eptatretus_burgeri
ENSPPRG00000002743	-	99	95.509	ENSEASG00005018106	LARP1B	99	95.509	Equus_asinus_asinus
ENSPPRG00000002743	-	63	57.471	ENSELUG00000023774	larp1b	64	47.048	Esox_lucius
ENSPPRG00000002743	-	100	100.000	ENSFCAG00000014650	-	100	100.000	Felis_catus
ENSPPRG00000002743	-	97	68.701	ENSFALG00000008098	LARP1B	55	68.701	Ficedula_albicollis
ENSPPRG00000002743	-	98	68.482	ENSGALG00000010207	LARP1B	50	68.677	Gallus_gallus
ENSPPRG00000002743	-	86	55.626	ENSGAFG00000012012	larp1b	53	55.626	Gambusia_affinis
ENSPPRG00000002743	-	100	91.642	ENSGGOG00000015900	LARP1B	100	91.642	Gorilla_gorilla
ENSPPRG00000002743	-	100	85.546	ENSHGLG00000006728	-	99	85.841	Heterocephalus_glaber_female
ENSPPRG00000002743	-	98	74.468	ENSHGLG00000013922	-	97	74.545	Heterocephalus_glaber_female
ENSPPRG00000002743	-	100	86.269	ENSHGLG00100014041	-	96	86.269	Heterocephalus_glaber_male
ENSPPRG00000002743	-	98	74.468	ENSHGLG00100016491	-	97	74.545	Heterocephalus_glaber_male
ENSPPRG00000002743	-	96	73.520	ENSSTOG00000034510	-	87	73.520	Ictidomys_tridecemlineatus
ENSPPRG00000002743	-	99	81.873	ENSSTOG00000021917	-	94	82.175	Ictidomys_tridecemlineatus
ENSPPRG00000002743	-	91	66.667	ENSSTOG00000033183	-	100	66.667	Ictidomys_tridecemlineatus
ENSPPRG00000002743	-	100	89.583	ENSSTOG00000008596	-	100	89.583	Ictidomys_tridecemlineatus
ENSPPRG00000002743	-	99	86.826	ENSJJAG00000022360	Larp1b	99	86.826	Jaculus_jaculus
ENSPPRG00000002743	-	97	47.761	ENSKMAG00000011589	larp1b	50	50.279	Kryptolebias_marmoratus
ENSPPRG00000002743	-	98	71.456	ENSLACG00000015247	LARP1B	100	70.229	Latimeria_chalumnae
ENSPPRG00000002743	-	98	57.554	ENSLOCG00000010684	larp1b	54	60.436	Lepisosteus_oculatus
ENSPPRG00000002743	-	99	92.857	ENSLAFG00000008473	-	99	92.857	Loxodonta_africana
ENSPPRG00000002743	-	100	92.537	ENSMFAG00000002218	LARP1B	100	92.537	Macaca_fascicularis
ENSPPRG00000002743	-	69	90.345	ENSMFAG00000003306	-	93	90.345	Macaca_fascicularis
ENSPPRG00000002743	-	100	92.537	ENSMMUG00000021347	LARP1B	100	92.537	Macaca_mulatta
ENSPPRG00000002743	-	65	90.909	ENSMNEG00000027747	-	89	90.909	Macaca_nemestrina
ENSPPRG00000002743	-	83	85.833	ENSMNEG00000030406	LARP1B	52	85.833	Macaca_nemestrina
ENSPPRG00000002743	-	98	82.617	ENSMLEG00000009306	LARP1B	55	82.617	Mandrillus_leucophaeus
ENSPPRG00000002743	-	99	50.376	ENSMAMG00000000081	larp1b	52	51.434	Mastacembelus_armatus
ENSPPRG00000002743	-	83	54.525	ENSMZEG00005002545	larp1b	90	54.746	Maylandia_zebra
ENSPPRG00000002743	-	98	56.000	ENSMGAG00000004809	LARP1B	60	56.752	Meleagris_gallopavo
ENSPPRG00000002743	-	100	90.149	ENSMAUG00000007879	-	100	90.149	Mesocricetus_auratus
ENSPPRG00000002743	-	100	94.925	ENSMICG00000036111	LARP1B	100	94.925	Microcebus_murinus
ENSPPRG00000002743	-	98	78.852	ENSMICG00000037883	-	90	78.852	Microcebus_murinus
ENSPPRG00000002743	-	98	68.824	ENSMICG00000028052	-	99	68.824	Microcebus_murinus
ENSPPRG00000002743	-	79	93.916	ENSMOCG00000001490	Larp1b	95	93.916	Microtus_ochrogaster
ENSPPRG00000002743	-	99	50.995	ENSMALG00000003638	larp1b	52	51.449	Monopterus_albus
ENSPPRG00000002743	-	100	89.254	MGP_CAROLIEiJ_G0024962	Larp1b	100	89.254	Mus_caroli
ENSPPRG00000002743	-	100	90.448	ENSMUSG00000025762	Larp1b	100	90.448	Mus_musculus
ENSPPRG00000002743	-	100	89.851	MGP_PahariEiJ_G0026403	Larp1b	100	89.851	Mus_pahari
ENSPPRG00000002743	-	100	90.448	MGP_SPRETEiJ_G0025897	Larp1b	100	90.448	Mus_spretus
ENSPPRG00000002743	-	98	82.070	ENSMLUG00000010229	LARP1B	59	82.070	Myotis_lucifugus
ENSPPRG00000002743	-	100	91.642	ENSNLEG00000013819	LARP1B	100	91.642	Nomascus_leucogenys
ENSPPRG00000002743	-	98	75.380	ENSOPRG00000005478	LARP1B	56	69.261	Ochotona_princeps
ENSPPRG00000002743	-	100	88.060	ENSODEG00000001292	-	100	88.060	Octodon_degus
ENSPPRG00000002743	-	97	51.603	ENSONIG00000012386	larp1b	55	51.107	Oreochromis_niloticus
ENSPPRG00000002743	-	98	93.617	ENSOCUG00000013330	LARP1B	56	91.211	Oryctolagus_cuniculus
ENSPPRG00000002743	-	98	90.606	ENSOGAG00000005771	LARP1B	59	89.669	Otolemur_garnettii
ENSPPRG00000002743	-	98	92.121	ENSOARG00000015300	LARP1B	56	90.058	Ovis_aries
ENSPPRG00000002743	-	100	91.343	ENSPPAG00000030439	LARP1B	100	91.343	Pan_paniscus
ENSPPRG00000002743	-	100	99.808	ENSPTIG00000011225	LARP1B	100	99.808	Panthera_tigris_altaica
ENSPPRG00000002743	-	100	91.045	ENSPTRG00000016437	LARP1B	100	91.045	Pan_troglodytes
ENSPPRG00000002743	-	100	92.239	ENSPANG00000012488	LARP1B	100	92.239	Papio_anubis
ENSPPRG00000002743	-	98	76.789	ENSPSIG00000012885	LARP1B	55	76.983	Pelodiscus_sinensis
ENSPPRG00000002743	-	99	44.086	ENSPMAG00000002700	larp1b	58	47.227	Petromyzon_marinus
ENSPPRG00000002743	-	99	84.776	ENSPCIG00000026516	LARP1B	87	85.455	Phascolarctos_cinereus
ENSPPRG00000002743	-	99	50.138	ENSPFOG00000019519	larp1b	50	51.779	Poecilia_formosa
ENSPPRG00000002743	-	97	52.897	ENSPFOG00000022837	-	77	53.271	Poecilia_formosa
ENSPPRG00000002743	-	80	56.690	ENSPREG00000005955	-	89	56.338	Poecilia_reticulata
ENSPPRG00000002743	-	98	87.538	ENSPCAG00000007546	LARP1B	56	85.742	Procavia_capensis
ENSPPRG00000002743	-	100	94.030	ENSPCOG00000021874	LARP1B	100	94.030	Propithecus_coquereli
ENSPPRG00000002743	-	98	87.500	ENSPVAG00000005373	LARP1B	57	87.500	Pteropus_vampyrus
ENSPPRG00000002743	-	100	91.642	ENSRNOG00000038366	Larp1b	100	91.642	Rattus_norvegicus
ENSPPRG00000002743	-	100	90.448	ENSRBIG00000039982	-	100	90.448	Rhinopithecus_bieti
ENSPPRG00000002743	-	100	82.985	ENSRBIG00000038568	-	92	82.985	Rhinopithecus_bieti
ENSPPRG00000002743	-	100	74.328	ENSRROG00000038525	-	96	74.328	Rhinopithecus_roxellana
ENSPPRG00000002743	-	100	92.537	ENSRROG00000030771	LARP1B	100	92.537	Rhinopithecus_roxellana
ENSPPRG00000002743	-	98	88.182	ENSSHAG00000014474	LARP1B	77	87.549	Sarcophilus_harrisii
ENSPPRG00000002743	-	98	50.279	ENSSMAG00000006347	larp1b	54	50.730	Scophthalmus_maximus
ENSPPRG00000002743	-	99	49.548	ENSSDUG00000004182	larp1b	50	49.729	Seriola_dumerili
ENSPPRG00000002743	-	98	75.922	ENSSPUG00000011837	LARP1B	73	76.117	Sphenodon_punctatus
ENSPPRG00000002743	-	99	50.268	ENSSPAG00000017772	larp1b	51	50.626	Stegastes_partitus
ENSPPRG00000002743	-	98	93.009	ENSSSCG00000034280	LARP1B	99	89.423	Sus_scrofa
ENSPPRG00000002743	-	73	56.790	ENSSSCG00000040491	-	99	73.529	Sus_scrofa
ENSPPRG00000002743	-	73	72.539	ENSTGUG00000002098	-	54	63.360	Taeniopygia_guttata
ENSPPRG00000002743	-	98	47.163	ENSTNIG00000012398	larp1b	57	48.485	Tetraodon_nigroviridis
ENSPPRG00000002743	-	98	81.871	ENSTTRG00000012984	LARP1B	56	81.871	Tursiops_truncatus
ENSPPRG00000002743	-	100	85.373	ENSUAMG00000016938	-	91	98.225	Ursus_americanus
ENSPPRG00000002743	-	98	95.745	ENSUMAG00000007373	LARP1B	56	94.727	Ursus_maritimus
ENSPPRG00000002743	-	98	82.227	ENSVPAG00000007223	LARP1B	56	82.227	Vicugna_pacos
ENSPPRG00000002743	-	98	96.657	ENSVVUG00000011307	LARP1B	100	95.490	Vulpes_vulpes
ENSPPRG00000002743	-	98	55.577	ENSXETG00000022512	larp1b	51	55.577	Xenopus_tropicalis
ENSPPRG00000002743	-	97	52.222	ENSXMAG00000008150	larp1b	50	50.794	Xiphophorus_maculatus