EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPPRG00000003257 (Gene tree)
Gene ID
109258362
Gene Symbol
PUF60
Alias
-
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Panthera_pardus
Status
putative
Strand
Minus strand
Length
17595 bases
Position
chrKV860444.1:729413-747007
Accession
109258362
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPPRP00000008422RRM_1PF00076.221.6e-4312
ENSPPRP00000008422RRM_1PF00076.221.6e-4322
ENSPPRP00000008438RRM_1PF00076.221.9e-4312
ENSPPRP00000008438RRM_1PF00076.221.9e-4322
ENSPPRP00000008426RRM_1PF00076.222.1e-4312
ENSPPRP00000008426RRM_1PF00076.222.1e-4322
ENSPPRP00000008416RRM_1PF00076.222.3e-4312
ENSPPRP00000008416RRM_1PF00076.222.3e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPPRT00000006277PUF60-2042196XM_019435142ENSPPRP00000008438516 (aa)XP_019290687UPI0005AC0B7C
ENSPPRT00000006262PUF60-2031807XM_019435136ENSPPRP00000008426530 (aa)XP_019290681UPI0005AC0EA1
ENSPPRT00000006252PUF60-2022138XM_019435134ENSPPRP00000008422499 (aa)XP_019290679-
ENSPPRT00000006251PUF60-2011695XM_019435132ENSPPRP00000008416564 (aa)XP_019290677UPI0005ABDD62
Gene Model
Click here to download ENSPPRG00000003257's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000003257's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPPRG00000003257PUF606132.432ENSPPRG00000004600CELF37932.979
ENSPPRG00000003257PUF605435.294ENSPPRG00000013843U2AF26037.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPPRG00000003257PUF6010099.245ENSG00000179950PUF6010099.245Homo_sapiens
ENSPPRG00000003257PUF6010086.180ENSAPOG00000001713puf60b9985.417Acanthochromis_polyacanthus
ENSPPRG00000003257PUF6010097.481ENSAMEG00000006406PUF609996.092Ailuropoda_melanoleuca
ENSPPRG00000003257PUF6010077.351ENSACIG00000003263-9977.778Amphilophus_citrinellus
ENSPPRG00000003257PUF6010085.413ENSACIG00000021705puf60b10085.413Amphilophus_citrinellus
ENSPPRG00000003257PUF6010086.180ENSAOCG00000005395puf60b10086.180Amphiprion_ocellaris
ENSPPRG00000003257PUF6010082.115ENSAOCG00000015558-10081.461Amphiprion_ocellaris
ENSPPRG00000003257PUF6010083.333ENSAPEG00000011923puf60b9783.333Amphiprion_percula
ENSPPRG00000003257PUF6010075.397ENSAPEG00000001836-9976.667Amphiprion_percula
ENSPPRG00000003257PUF6010081.696ENSATEG00000006303-9981.524Anabas_testudineus
ENSPPRG00000003257PUF6010086.180ENSATEG00000001730puf60b9985.417Anabas_testudineus
ENSPPRG00000003257PUF6010098.256ENSAPLG00000010150PUF6010098.084Anas_platyrhynchos
ENSPPRG00000003257PUF6010096.724ENSACAG00000001645PUF609895.833Anolis_carolinensis
ENSPPRG00000003257PUF6010099.245ENSANAG00000018626PUF6010099.245Aotus_nancymaae
ENSPPRG00000003257PUF6010085.413ENSACLG00000004462puf60b10085.413Astatotilapia_calliptera
ENSPPRG00000003257PUF6010085.404ENSAMXG00000036570puf60a9785.207Astyanax_mexicanus
ENSPPRG00000003257PUF6010076.449ENSAMXG00000041030puf60b10074.719Astyanax_mexicanus
ENSPPRG00000003257PUF6010099.434ENSBTAG00000037493PUF6010099.434Bos_taurus
ENSPPRG00000003257PUF608052.650WBGene00004389rnp-68353.497Caenorhabditis_elegans
ENSPPRG00000003257PUF6010099.468ENSCJAG00000021485PUF6010099.468Callithrix_jacchus
ENSPPRG00000003257PUF6010099.599ENSCAFG00000001400PUF609997.513Canis_familiaris
ENSPPRG00000003257PUF6010099.623ENSCAFG00020018754PUF6010099.623Canis_lupus_dingo
ENSPPRG00000003257PUF6010099.419ENSCHIG00000001618PUF609298.381Capra_hircus
ENSPPRG00000003257PUF6010099.612ENSTSYG00000011912PUF6010099.612Carlito_syrichta
ENSPPRG00000003257PUF6010093.654ENSCPOG00000014613PUF609992.705Cavia_porcellus
ENSPPRG00000003257PUF6010099.245ENSCCAG00000007744PUF6010099.245Cebus_capucinus
ENSPPRG00000003257PUF6010099.245ENSCATG00000035405PUF6010099.245Cercocebus_atys
ENSPPRG00000003257PUF6010099.468ENSCLAG00000009154PUF6010099.468Chinchilla_lanigera
ENSPPRG00000003257PUF6010099.225ENSCSAG00000008878PUF6010099.225Chlorocebus_sabaeus
ENSPPRG00000003257PUF6010098.256ENSCPBG00000005595PUF609997.727Chrysemys_picta_bellii
ENSPPRG00000003257PUF6010047.993ENSCING00000008436-10047.970Ciona_intestinalis
ENSPPRG00000003257PUF606363.043ENSCING00000002156-8763.043Ciona_intestinalis
ENSPPRG00000003257PUF609854.857ENSCSAVG00000001385-9955.192Ciona_savignyi
ENSPPRG00000003257PUF609750.716ENSCSAVG00000004765-9750.308Ciona_savignyi
ENSPPRG00000003257PUF608199.041ENSCANG00000041843PUF6010099.041Colobus_angolensis_palliatus
ENSPPRG00000003257PUF6010099.031ENSCGRG00001017442Puf6010098.936Cricetulus_griseus_chok1gshd
ENSPPRG00000003257PUF6010099.031ENSCGRG00000003717Puf609997.842Cricetulus_griseus_crigri
ENSPPRG00000003257PUF6010085.413ENSCSEG00000019887puf60b9384.630Cynoglossus_semilaevis
ENSPPRG00000003257PUF6010074.901ENSCSEG00000014845-8977.075Cynoglossus_semilaevis
ENSPPRG00000003257PUF6010084.645ENSCVAG00000009386puf60b10085.797Cyprinodon_variegatus
ENSPPRG00000003257PUF609081.015ENSCVAG00000001560-9879.747Cyprinodon_variegatus
ENSPPRG00000003257PUF6010078.947ENSDARG00000001241puf60b9996.032Danio_rerio
ENSPPRG00000003257PUF6010086.553ENSDARG00000032175puf60a9993.191Danio_rerio
ENSPPRG00000003257PUF609884.221ENSDNOG00000043278PUF609881.250Dasypus_novemcinctus
ENSPPRG00000003257PUF6010099.419ENSDORG00000004585Puf6010098.561Dipodomys_ordii
ENSPPRG00000003257PUF609750.973FBgn0028577hfp9946.346Drosophila_melanogaster
ENSPPRG00000003257PUF609872.485ENSEBUG00000005470-8872.222Eptatretus_burgeri
ENSPPRG00000003257PUF6010063.351ENSEBUG00000014291puf60b8466.490Eptatretus_burgeri
ENSPPRG00000003257PUF6010099.623ENSEASG00005009695PUF6010099.623Equus_asinus_asinus
ENSPPRG00000003257PUF6010099.612ENSECAG00000024681PUF609999.101Equus_caballus
ENSPPRG00000003257PUF6010085.496ENSELUG00000018443-9985.404Esox_lucius
ENSPPRG00000003257PUF6010084.231ENSELUG00000006507puf60b10079.464Esox_lucius
ENSPPRG00000003257PUF60100100.000ENSFCAG00000001045PUF60100100.000Felis_catus
ENSPPRG00000003257PUF6010085.465ENSFALG00000001136PUF609986.667Ficedula_albicollis
ENSPPRG00000003257PUF6010099.225ENSFDAG00000017177PUF6010099.113Fukomys_damarensis
ENSPPRG00000003257PUF6010085.029ENSFHEG00000020046puf60b10086.180Fundulus_heteroclitus
ENSPPRG00000003257PUF609679.317ENSFHEG00000021687PUF6010080.164Fundulus_heteroclitus
ENSPPRG00000003257PUF6010072.053ENSGMOG00000006392puf60b10071.053Gadus_morhua
ENSPPRG00000003257PUF606797.965ENSGALG00000039901PUF609497.965Gallus_gallus
ENSPPRG00000003257PUF6010079.641ENSGAFG00000004334-9979.042Gambusia_affinis
ENSPPRG00000003257PUF6010084.453ENSGAFG00000021040puf60b10085.605Gambusia_affinis
ENSPPRG00000003257PUF6010073.996ENSGACG00000004717puf60b10072.710Gasterosteus_aculeatus
ENSPPRG00000003257PUF6010070.793ENSGACG00000001484-10069.423Gasterosteus_aculeatus
ENSPPRG00000003257PUF6010098.256ENSGAGG00000013289PUF609397.727Gopherus_agassizii
ENSPPRG00000003257PUF6010099.245ENSGGOG00000004646PUF6010099.245Gorilla_gorilla
ENSPPRG00000003257PUF6010085.413ENSHBUG00000015118puf60b10085.413Haplochromis_burtoni
ENSPPRG00000003257PUF6010082.738ENSHBUG00000009634-10082.738Haplochromis_burtoni
ENSPPRG00000003257PUF6010099.225ENSHGLG00000006111PUF6010099.113Heterocephalus_glaber_female
ENSPPRG00000003257PUF6010099.225ENSHGLG00100012362PUF6010099.113Heterocephalus_glaber_male
ENSPPRG00000003257PUF6010082.440ENSHCOG00000015541puf60b10081.734Hippocampus_comes
ENSPPRG00000003257PUF609866.798ENSHCOG00000000378-9965.226Hippocampus_comes
ENSPPRG00000003257PUF6010082.411ENSIPUG00000002453puf60a9982.806Ictalurus_punctatus
ENSPPRG00000003257PUF6010078.759ENSIPUG00000004660puf60b9978.531Ictalurus_punctatus
ENSPPRG00000003257PUF6010099.419ENSSTOG00000025037PUF6010098.404Ictidomys_tridecemlineatus
ENSPPRG00000003257PUF6010099.225ENSJJAG00000001076Puf6010098.759Jaculus_jaculus
ENSPPRG00000003257PUF6010085.029ENSKMAG00000016745puf60b10086.180Kryptolebias_marmoratus
ENSPPRG00000003257PUF6010078.450ENSKMAG00000010106-10075.933Kryptolebias_marmoratus
ENSPPRG00000003257PUF6010083.493ENSLBEG00000012505puf60b10083.493Labrus_bergylta
ENSPPRG00000003257PUF607390.710ENSLACG00000005456PUF6010090.437Latimeria_chalumnae
ENSPPRG00000003257PUF6010090.944ENSLOCG00000010106puf60b10088.368Lepisosteus_oculatus
ENSPPRG00000003257PUF6010098.062ENSLAFG00000022929PUF6010095.204Loxodonta_africana
ENSPPRG00000003257PUF6010099.245ENSMFAG00000043373PUF6010099.245Macaca_fascicularis
ENSPPRG00000003257PUF6010099.245ENSMMUG00000013558PUF6010099.245Macaca_mulatta
ENSPPRG00000003257PUF6010099.245ENSMNEG00000031099PUF6010099.245Macaca_nemestrina
ENSPPRG00000003257PUF6010099.225ENSMLEG00000040009PUF6010099.225Mandrillus_leucophaeus
ENSPPRG00000003257PUF6010085.797ENSMAMG00000010394puf60b10083.551Mastacembelus_armatus
ENSPPRG00000003257PUF6010083.301ENSMAMG00000019476-9982.163Mastacembelus_armatus
ENSPPRG00000003257PUF6010085.413ENSMZEG00005018515puf60b10085.413Maylandia_zebra
ENSPPRG00000003257PUF6010082.726ENSMZEG00005019425-9981.973Maylandia_zebra
ENSPPRG00000003257PUF6010098.256ENSMGAG00000013070PUF609997.714Meleagris_gallopavo
ENSPPRG00000003257PUF607299.020ENSMAUG00000014267-10099.020Mesocricetus_auratus
ENSPPRG00000003257PUF609683.195ENSMAUG00000018549-9583.195Mesocricetus_auratus
ENSPPRG00000003257PUF6010099.623ENSMICG00000012226PUF6010099.623Microcebus_murinus
ENSPPRG00000003257PUF6010099.225ENSMOCG00000018780Puf6010099.113Microtus_ochrogaster
ENSPPRG00000003257PUF6010085.797ENSMMOG00000004217puf60b10085.797Mola_mola
ENSPPRG00000003257PUF6010075.800ENSMMOG00000018059-9976.712Mola_mola
ENSPPRG00000003257PUF6010099.399ENSMODG00000009161PUF6010096.277Monodelphis_domestica
ENSPPRG00000003257PUF6010078.311ENSMALG00000006797puf60b9977.652Monopterus_albus
ENSPPRG00000003257PUF6010081.382ENSMALG00000000200-9979.245Monopterus_albus
ENSPPRG00000003257PUF6010099.031MGP_CAROLIEiJ_G0019910Puf6010098.936Mus_caroli
ENSPPRG00000003257PUF6010099.031ENSMUSG00000002524Puf6010098.936Mus_musculus
ENSPPRG00000003257PUF6010099.031MGP_PahariEiJ_G0019920Puf6010098.936Mus_pahari
ENSPPRG00000003257PUF6010099.031MGP_SPRETEiJ_G0020812Puf6010098.936Mus_spretus
ENSPPRG00000003257PUF6010099.225ENSMPUG00000008137PUF609798.022Mustela_putorius_furo
ENSPPRG00000003257PUF6010098.450ENSMLUG00000000238-9897.482Myotis_lucifugus
ENSPPRG00000003257PUF6010094.990ENSMLUG00000013032-9794.990Myotis_lucifugus
ENSPPRG00000003257PUF6010099.291ENSNGAG00000000712Puf6010099.291Nannospalax_galili
ENSPPRG00000003257PUF608382.805ENSNBRG00000013047puf60b9784.235Neolamprologus_brichardi
ENSPPRG00000003257PUF6010082.917ENSNBRG00000017223-9982.129Neolamprologus_brichardi
ENSPPRG00000003257PUF6010099.225ENSNLEG00000002156PUF6010098.404Nomascus_leucogenys
ENSPPRG00000003257PUF607599.659ENSOPRG00000002147PUF607599.659Ochotona_princeps
ENSPPRG00000003257PUF6074100.000ENSODEG00000014024-100100.000Octodon_degus
ENSPPRG00000003257PUF609874.162ENSODEG00000015513-9971.375Octodon_degus
ENSPPRG00000003257PUF6010085.413ENSONIG00000006247puf60b9984.659Oreochromis_niloticus
ENSPPRG00000003257PUF6010082.917ENSONIG00000014030-9982.197Oreochromis_niloticus
ENSPPRG00000003257PUF609778.020ENSOANG00000006962PUF609978.210Ornithorhynchus_anatinus
ENSPPRG00000003257PUF609978.977ENSORLG00000028655-9979.087Oryzias_latipes
ENSPPRG00000003257PUF6010085.413ENSORLG00000012279puf60b10085.029Oryzias_latipes
ENSPPRG00000003257PUF609979.580ENSORLG00020018144-9978.424Oryzias_latipes_hni
ENSPPRG00000003257PUF6010085.413ENSORLG00020007333puf6010085.029Oryzias_latipes_hni
ENSPPRG00000003257PUF609979.580ENSORLG00015016833-9978.545Oryzias_latipes_hsok
ENSPPRG00000003257PUF6010084.512ENSORLG00015007718puf60b10084.895Oryzias_latipes_hsok
ENSPPRG00000003257PUF609980.754ENSOMEG00000022185-9979.323Oryzias_melastigma
ENSPPRG00000003257PUF6010083.083ENSOMEG00000001643puf60b9983.232Oryzias_melastigma
ENSPPRG00000003257PUF6010099.419ENSOGAG00000006259PUF609997.513Otolemur_garnettii
ENSPPRG00000003257PUF6010096.899ENSOARG00000016235PUF609996.941Ovis_aries
ENSPPRG00000003257PUF6010099.245ENSPPAG00000029933PUF6010099.245Pan_paniscus
ENSPPRG00000003257PUF6010099.800ENSPTIG00000009795PUF609997.701Panthera_tigris_altaica
ENSPPRG00000003257PUF6010099.057ENSPTRG00000020670PUF6010099.057Pan_troglodytes
ENSPPRG00000003257PUF6010099.031ENSPTRG00000043963-9998.672Pan_troglodytes
ENSPPRG00000003257PUF6010099.245ENSPANG00000021936PUF6010099.245Papio_anubis
ENSPPRG00000003257PUF6010088.077ENSPKIG00000012204puf60b10088.077Paramormyrops_kingsleyae
ENSPPRG00000003257PUF6010086.561ENSPKIG00000004295puf60a9992.059Paramormyrops_kingsleyae
ENSPPRG00000003257PUF6010098.062ENSPSIG00000004679PUF609997.897Pelodiscus_sinensis
ENSPPRG00000003257PUF6010084.351ENSPMGG00000013444puf60b9984.351Periophthalmus_magnuspinnatus
ENSPPRG00000003257PUF6010099.225ENSPEMG00000008820Puf6010099.113Peromyscus_maniculatus_bairdii
ENSPPRG00000003257PUF6010099.419ENSPCIG00000020270PUF609999.232Phascolarctos_cinereus
ENSPPRG00000003257PUF6010080.925ENSPFOG00000011118-9979.962Poecilia_formosa
ENSPPRG00000003257PUF6010085.029ENSPFOG00000019217puf60b9885.714Poecilia_formosa
ENSPPRG00000003257PUF6010080.925ENSPLAG00000017025-9279.584Poecilia_latipinna
ENSPPRG00000003257PUF6010085.029ENSPLAG00000010754puf60b10086.180Poecilia_latipinna
ENSPPRG00000003257PUF6010080.925ENSPMEG00000009767-9279.962Poecilia_mexicana
ENSPPRG00000003257PUF6010085.029ENSPMEG00000000838puf60b10086.180Poecilia_mexicana
ENSPPRG00000003257PUF6010082.738ENSPREG00000005440puf60b10083.929Poecilia_reticulata
ENSPPRG00000003257PUF608197.362ENSPPYG00000018951-9597.362Pongo_abelii
ENSPPRG00000003257PUF608199.281ENSPCAG00000014837PUF6010099.281Procavia_capensis
ENSPPRG00000003257PUF6010099.434ENSPCOG00000027981PUF6010099.434Propithecus_coquereli
ENSPPRG00000003257PUF6010099.234ENSPVAG00000016167PUF608199.234Pteropus_vampyrus
ENSPPRG00000003257PUF6010085.413ENSPNYG00000002556puf60b10085.413Pundamilia_nyererei
ENSPPRG00000003257PUF6010082.726ENSPNYG00000004273-9981.973Pundamilia_nyererei
ENSPPRG00000003257PUF6010085.602ENSPNAG00000019909puf60a9985.404Pygocentrus_nattereri
ENSPPRG00000003257PUF6010080.556ENSPNAG00000019415puf60b8977.932Pygocentrus_nattereri
ENSPPRG00000003257PUF6010099.031ENSRNOG00000009960Puf6010098.759Rattus_norvegicus
ENSPPRG00000003257PUF6010099.245ENSRBIG00000035274PUF6010099.245Rhinopithecus_bieti
ENSPPRG00000003257PUF6010099.245ENSRROG00000029360PUF6010099.245Rhinopithecus_roxellana
ENSPPRG00000003257PUF6010098.062ENSSBOG00000027089PUF609997.543Saimiri_boliviensis_boliviensis
ENSPPRG00000003257PUF609098.707ENSSHAG00000006668PUF609695.898Sarcophilus_harrisii
ENSPPRG00000003257PUF609686.437ENSSFOG00015019619puf60b9986.437Scleropages_formosus
ENSPPRG00000003257PUF609586.922ENSSFOG00015019371puf60a9887.324Scleropages_formosus
ENSPPRG00000003257PUF607394.224ENSSMAG00000016381puf60b7294.224Scophthalmus_maximus
ENSPPRG00000003257PUF6010084.398ENSSDUG00000009935puf60b10083.488Seriola_dumerili
ENSPPRG00000003257PUF609981.081ENSSDUG00000007048-9979.962Seriola_dumerili
ENSPPRG00000003257PUF6010080.418ENSSLDG00000007366-9980.835Seriola_lalandi_dorsalis
ENSPPRG00000003257PUF6010086.180ENSSLDG00000024011puf60b10083.925Seriola_lalandi_dorsalis
ENSPPRG00000003257PUF606784.971ENSSPUG00000013518PUF609485.460Sphenodon_punctatus
ENSPPRG00000003257PUF6010083.364ENSSPAG00000012144puf60b10083.925Stegastes_partitus
ENSPPRG00000003257PUF6010082.061ENSSPAG00000020285-10082.634Stegastes_partitus
ENSPPRG00000003257PUF6010099.612ENSSSCG00000038800PUF609799.599Sus_scrofa
ENSPPRG00000003257PUF6010094.961ENSTGUG00000012797-10094.828Taeniopygia_guttata
ENSPPRG00000003257PUF6010085.029ENSTRUG00000005420puf60b10082.804Takifugu_rubripes
ENSPPRG00000003257PUF6010079.960ENSTRUG00000008843-10080.361Takifugu_rubripes
ENSPPRG00000003257PUF6010078.682ENSTNIG00000003069-10078.011Tetraodon_nigroviridis
ENSPPRG00000003257PUF6010085.029ENSTNIG00000013675puf60b10084.091Tetraodon_nigroviridis
ENSPPRG00000003257PUF606296.284ENSTBEG00000002751-9996.271Tupaia_belangeri
ENSPPRG00000003257PUF608181.503ENSTBEG00000001899-10081.792Tupaia_belangeri
ENSPPRG00000003257PUF6010098.643ENSTTRG00000017088PUF6010098.643Tursiops_truncatus
ENSPPRG00000003257PUF6010099.623ENSUAMG00000024917PUF6010099.623Ursus_americanus
ENSPPRG00000003257PUF6010094.380ENSUMAG00000000272PUF609993.345Ursus_maritimus
ENSPPRG00000003257PUF6010099.612ENSVVUG00000022527PUF6010099.612Vulpes_vulpes
ENSPPRG00000003257PUF6010094.589ENSXETG00000012469puf609994.084Xenopus_tropicalis
ENSPPRG00000003257PUF6010084.524ENSXCOG00000012355puf60b10085.714Xiphophorus_couchianus
ENSPPRG00000003257PUF6010085.029ENSXMAG00000001862puf60b10086.180Xiphophorus_maculatus
ENSPPRG00000003257PUF6010081.238ENSXMAG00000010507-9880.439Xiphophorus_maculatus

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