EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000003270 (Gene tree)
Gene ID: 109246264
Gene Symbol: HFM1
Alias: -
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 85484 bases
Position: chrKV860334.1:13069166-13154649
Accession: 109246264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000008434	ResIII	PF04851.15	7.8e-11	1	1
ENSPPRP00000008434	DEAD	PF00270.29	3.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000006270	HFM1-201	4323	XM_019414142	ENSPPRP00000008434	1440 (aa)	XP_019269687	-

Gene Model

Click here to download ENSPPRG00000003270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000003270's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000003270	HFM1	58	31.098	ENSPPRG00000004435	SNRNP200	75	31.098
ENSPPRG00000003270	HFM1	51	35.573	ENSPPRG00000011358	ASCC3	61	35.573

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000003270	HFM1	100	86.250	ENSG00000162669	HFM1	100	86.250	Homo_sapiens
ENSPPRG00000003270	HFM1	58	65.758	ENSAPOG00000005304	hfm1	95	65.758	Acanthochromis_polyacanthus
ENSPPRG00000003270	HFM1	100	92.153	ENSAMEG00000000432	HFM1	100	92.153	Ailuropoda_melanoleuca
ENSPPRG00000003270	HFM1	73	58.758	ENSACIG00000021553	hfm1	95	58.758	Amphilophus_citrinellus
ENSPPRG00000003270	HFM1	58	66.033	ENSAOCG00000022839	hfm1	96	68.852	Amphiprion_ocellaris
ENSPPRG00000003270	HFM1	55	69.027	ENSAPEG00000014316	hfm1	96	69.027	Amphiprion_percula
ENSPPRG00000003270	HFM1	66	64.153	ENSATEG00000019181	hfm1	80	63.607	Anabas_testudineus
ENSPPRG00000003270	HFM1	100	60.902	ENSAPLG00000013639	HFM1	100	60.902	Anas_platyrhynchos
ENSPPRG00000003270	HFM1	100	82.802	ENSANAG00000029513	HFM1	100	82.802	Aotus_nancymaae
ENSPPRG00000003270	HFM1	69	59.685	ENSACLG00000009033	hfm1	96	64.988	Astatotilapia_calliptera
ENSPPRG00000003270	HFM1	85	54.811	ENSAMXG00000006108	hfm1	83	54.811	Astyanax_mexicanus
ENSPPRG00000003270	HFM1	100	87.500	ENSBTAG00000020856	HFM1	100	87.500	Bos_taurus
ENSPPRG00000003270	HFM1	100	84.583	ENSCJAG00000001843	HFM1	100	84.583	Callithrix_jacchus
ENSPPRG00000003270	HFM1	100	91.528	ENSCAFG00000020187	HFM1	100	91.528	Canis_familiaris
ENSPPRG00000003270	HFM1	100	84.466	ENSTSYG00000014250	HFM1	100	84.466	Carlito_syrichta
ENSPPRG00000003270	HFM1	99	79.778	ENSCPOG00000007421	HFM1	99	79.778	Cavia_porcellus
ENSPPRG00000003270	HFM1	100	84.444	ENSCCAG00000033206	HFM1	100	84.444	Cebus_capucinus
ENSPPRG00000003270	HFM1	100	85.486	ENSCATG00000030987	HFM1	100	85.486	Cercocebus_atys
ENSPPRG00000003270	HFM1	100	80.795	ENSCLAG00000005173	HFM1	99	80.795	Chinchilla_lanigera
ENSPPRG00000003270	HFM1	68	94.737	ENSCHOG00000011824	-	77	94.737	Choloepus_hoffmanni
ENSPPRG00000003270	HFM1	100	73.430	ENSCGRG00001016995	Hfm1	100	73.430	Cricetulus_griseus_chok1gshd
ENSPPRG00000003270	HFM1	100	77.654	ENSCGRG00000017181	Hfm1	100	77.654	Cricetulus_griseus_crigri
ENSPPRG00000003270	HFM1	71	60.405	ENSCSEG00000017659	hfm1	94	60.405	Cynoglossus_semilaevis
ENSPPRG00000003270	HFM1	76	55.885	ENSDARG00000104288	hfm1	96	55.885	Danio_rerio
ENSPPRG00000003270	HFM1	100	80.863	ENSDNOG00000004776	HFM1	100	80.863	Dasypus_novemcinctus
ENSPPRG00000003270	HFM1	100	77.709	ENSDORG00000014661	Hfm1	100	77.709	Dipodomys_ordii
ENSPPRG00000003270	HFM1	71	86.791	ENSEASG00005015424	HFM1	98	86.791	Equus_asinus_asinus
ENSPPRG00000003270	HFM1	100	86.801	ENSECAG00000024039	HFM1	100	86.801	Equus_caballus
ENSPPRG00000003270	HFM1	63	67.728	ENSELUG00000018944	hfm1	98	67.728	Esox_lucius
ENSPPRG00000003270	HFM1	100	99.306	ENSFCAG00000029116	HFM1	100	99.306	Felis_catus
ENSPPRG00000003270	HFM1	100	60.068	ENSFALG00000001781	HFM1	100	60.780	Ficedula_albicollis
ENSPPRG00000003270	HFM1	100	79.343	ENSFDAG00000020816	HFM1	100	79.343	Fukomys_damarensis
ENSPPRG00000003270	HFM1	66	61.065	ENSGMOG00000017436	hfm1	99	61.065	Gadus_morhua
ENSPPRG00000003270	HFM1	71	62.173	ENSGAFG00000018093	hfm1	92	67.558	Gambusia_affinis
ENSPPRG00000003270	HFM1	66	61.411	ENSGACG00000015686	hfm1	100	61.411	Gasterosteus_aculeatus
ENSPPRG00000003270	HFM1	100	86.111	ENSGGOG00000038524	HFM1	100	86.111	Gorilla_gorilla
ENSPPRG00000003270	HFM1	64	64.592	ENSHBUG00000007309	hfm1	95	60.562	Haplochromis_burtoni
ENSPPRG00000003270	HFM1	56	64.461	ENSHCOG00000019632	hfm1	97	64.461	Hippocampus_comes
ENSPPRG00000003270	HFM1	65	65.129	ENSIPUG00000017020	hfm1	92	65.714	Ictalurus_punctatus
ENSPPRG00000003270	HFM1	100	77.639	ENSJJAG00000017198	Hfm1	100	77.639	Jaculus_jaculus
ENSPPRG00000003270	HFM1	62	62.708	ENSKMAG00000002282	hfm1	90	62.708	Kryptolebias_marmoratus
ENSPPRG00000003270	HFM1	71	60.098	ENSLBEG00000006759	hfm1	96	65.830	Labrus_bergylta
ENSPPRG00000003270	HFM1	68	69.688	ENSLACG00000010698	HFM1	100	67.105	Latimeria_chalumnae
ENSPPRG00000003270	HFM1	74	63.586	ENSLOCG00000004931	hfm1	99	63.678	Lepisosteus_oculatus
ENSPPRG00000003270	HFM1	52	90.040	ENSLAFG00000015903	-	99	90.040	Loxodonta_africana
ENSPPRG00000003270	HFM1	100	82.536	ENSMFAG00000003649	HFM1	100	82.536	Macaca_fascicularis
ENSPPRG00000003270	HFM1	100	85.000	ENSMMUG00000006819	HFM1	100	85.000	Macaca_mulatta
ENSPPRG00000003270	HFM1	54	69.448	ENSMAMG00000004623	hfm1	97	65.942	Mastacembelus_armatus
ENSPPRG00000003270	HFM1	69	59.685	ENSMZEG00005004679	hfm1	96	64.988	Maylandia_zebra
ENSPPRG00000003270	HFM1	54	78.344	ENSMGAG00000008437	HFM1	98	78.344	Meleagris_gallopavo
ENSPPRG00000003270	HFM1	100	77.393	ENSMAUG00000018858	Hfm1	100	77.393	Mesocricetus_auratus
ENSPPRG00000003270	HFM1	100	85.149	ENSMICG00000037935	HFM1	100	85.149	Microcebus_murinus
ENSPPRG00000003270	HFM1	100	76.250	ENSMOCG00000014812	Hfm1	100	76.250	Microtus_ochrogaster
ENSPPRG00000003270	HFM1	62	63.749	ENSMMOG00000006148	hfm1	96	63.921	Mola_mola
ENSPPRG00000003270	HFM1	69	60.555	ENSMALG00000002401	hfm1	94	66.546	Monopterus_albus
ENSPPRG00000003270	HFM1	95	73.077	MGP_CAROLIEiJ_G0027496	Hfm1	100	73.077	Mus_caroli
ENSPPRG00000003270	HFM1	100	76.806	ENSMUSG00000043410	Hfm1	100	76.806	Mus_musculus
ENSPPRG00000003270	HFM1	100	76.528	MGP_PahariEiJ_G0017268	Hfm1	100	76.528	Mus_pahari
ENSPPRG00000003270	HFM1	100	76.667	MGP_SPRETEiJ_G0028495	Hfm1	100	76.667	Mus_spretus
ENSPPRG00000003270	HFM1	100	88.013	ENSMPUG00000004594	HFM1	100	88.013	Mustela_putorius_furo
ENSPPRG00000003270	HFM1	100	84.605	ENSMLUG00000010200	HFM1	100	84.605	Myotis_lucifugus
ENSPPRG00000003270	HFM1	69	56.989	ENSNBRG00000002910	hfm1	97	65.212	Neolamprologus_brichardi
ENSPPRG00000003270	HFM1	100	82.108	ENSNLEG00000010285	HFM1	100	82.108	Nomascus_leucogenys
ENSPPRG00000003270	HFM1	84	68.103	ENSMEUG00000015788	HFM1	84	68.103	Notamacropus_eugenii
ENSPPRG00000003270	HFM1	84	76.525	ENSOPRG00000013916	HFM1	84	76.525	Ochotona_princeps
ENSPPRG00000003270	HFM1	71	61.620	ENSONIG00000010590	hfm1	100	61.582	Oreochromis_niloticus
ENSPPRG00000003270	HFM1	56	65.560	ENSORLG00000026844	hfm1	99	65.560	Oryzias_latipes
ENSPPRG00000003270	HFM1	68	55.488	ENSORLG00020002951	hfm1	77	55.657	Oryzias_latipes_hni
ENSPPRG00000003270	HFM1	72	58.592	ENSOMEG00000016474	hfm1	90	51.680	Oryzias_melastigma
ENSPPRG00000003270	HFM1	85	87.368	ENSOGAG00000032369	HFM1	99	87.368	Otolemur_garnettii
ENSPPRG00000003270	HFM1	100	87.300	ENSOARG00000015812	HFM1	100	87.300	Ovis_aries
ENSPPRG00000003270	HFM1	92	87.566	ENSPPAG00000024582	HFM1	99	87.566	Pan_paniscus
ENSPPRG00000003270	HFM1	100	99.722	ENSPTIG00000018881	HFM1	100	99.722	Panthera_tigris_altaica
ENSPPRG00000003270	HFM1	100	86.319	ENSPTRG00000000948	HFM1	100	86.319	Pan_troglodytes
ENSPPRG00000003270	HFM1	100	85.278	ENSPANG00000009838	HFM1	100	85.278	Papio_anubis
ENSPPRG00000003270	HFM1	73	60.911	ENSPKIG00000003810	hfm1	95	68.491	Paramormyrops_kingsleyae
ENSPPRG00000003270	HFM1	57	65.417	ENSPMGG00000011059	hfm1	100	65.417	Periophthalmus_magnuspinnatus
ENSPPRG00000003270	HFM1	100	78.681	ENSPEMG00000022852	Hfm1	100	78.681	Peromyscus_maniculatus_bairdii
ENSPPRG00000003270	HFM1	100	67.785	ENSPCIG00000014233	HFM1	100	67.785	Phascolarctos_cinereus
ENSPPRG00000003270	HFM1	71	62.797	ENSPFOG00000017194	hfm1	100	63.083	Poecilia_formosa
ENSPPRG00000003270	HFM1	71	63.549	ENSPLAG00000000571	hfm1	92	63.549	Poecilia_latipinna
ENSPPRG00000003270	HFM1	71	63.452	ENSPMEG00000019475	hfm1	93	63.452	Poecilia_mexicana
ENSPPRG00000003270	HFM1	71	63.503	ENSPREG00000007803	hfm1	92	67.153	Poecilia_reticulata
ENSPPRG00000003270	HFM1	100	85.972	ENSPPYG00000001163	HFM1	100	85.972	Pongo_abelii
ENSPPRG00000003270	HFM1	74	78.027	ENSPCAG00000004289	-	74	78.027	Procavia_capensis
ENSPPRG00000003270	HFM1	100	78.958	ENSPVAG00000009713	HFM1	100	78.958	Pteropus_vampyrus
ENSPPRG00000003270	HFM1	64	63.276	ENSPNYG00000001795	hfm1	96	64.988	Pundamilia_nyererei
ENSPPRG00000003270	HFM1	59	67.730	ENSPNAG00000010865	hfm1	84	67.730	Pygocentrus_nattereri
ENSPPRG00000003270	HFM1	100	75.417	ENSRNOG00000023299	Hfm1	100	75.417	Rattus_norvegicus
ENSPPRG00000003270	HFM1	100	85.278	ENSRROG00000045569	HFM1	100	85.278	Rhinopithecus_roxellana
ENSPPRG00000003270	HFM1	100	82.431	ENSSBOG00000027456	HFM1	100	82.431	Saimiri_boliviensis_boliviensis
ENSPPRG00000003270	HFM1	60	72.286	ENSSHAG00000014616	-	98	72.286	Sarcophilus_harrisii
ENSPPRG00000003270	HFM1	100	49.710	ENSSFOG00015020129	hfm1	100	49.645	Scleropages_formosus
ENSPPRG00000003270	HFM1	62	65.475	ENSSMAG00000006907	hfm1	88	64.661	Scophthalmus_maximus
ENSPPRG00000003270	HFM1	57	66.264	ENSSDUG00000011424	hfm1	93	66.264	Seriola_dumerili
ENSPPRG00000003270	HFM1	58	66.386	ENSSLDG00000016386	hfm1	92	66.386	Seriola_lalandi_dorsalis
ENSPPRG00000003270	HFM1	70	58.465	ENSSPAG00000001023	hfm1	96	65.930	Stegastes_partitus
ENSPPRG00000003270	HFM1	100	83.367	ENSSSCG00000006912	HFM1	99	84.889	Sus_scrofa
ENSPPRG00000003270	HFM1	66	76.698	ENSTGUG00000006172	HFM1	100	76.698	Taeniopygia_guttata
ENSPPRG00000003270	HFM1	100	83.414	ENSTTRG00000013933	HFM1	100	83.414	Tursiops_truncatus
ENSPPRG00000003270	HFM1	93	85.972	ENSVPAG00000011331	HFM1	93	85.972	Vicugna_pacos
ENSPPRG00000003270	HFM1	70	86.254	ENSVVUG00000020760	HFM1	99	86.254	Vulpes_vulpes
ENSPPRG00000003270	HFM1	58	66.627	ENSXMAG00000004178	hfm1	93	66.627	Xiphophorus_maculatus