EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000003424 (Gene tree)
Gene ID: 109271918
Gene Symbol: TRMT13
Alias: -
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 20031 bases
Position: chrKV860303.1:6440866-6460896
Accession: 109271918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000008720	TRM13	PF05206.14	1e-92	1	1
ENSPPRP00000008707	zf-U11-48K	PF05253.12	4.9e-10	1	1
ENSPPRP00000008695	zf-U11-48K	PF05253.12	5.1e-10	1	1
ENSPPRP00000008720	zf-U11-48K	PF05253.12	3e-09	1	1
ENSPPRP00000008707	zf-TRM13_CCCH	PF11722.8	1.9e-14	1	1
ENSPPRP00000008720	zf-TRM13_CCCH	PF11722.8	3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000006558	TRMT13-202	330	-	ENSPPRP00000008707	109 (aa)	-	UPI000DE7C548
ENSPPRT00000006539	TRMT13-201	393	-	ENSPPRP00000008695	130 (aa)	-	-
ENSPPRT00000006561	TRMT13-203	3176	XM_019457621	ENSPPRP00000008720	481 (aa)	XP_019313166	UPI00042BF165

Gene Model

Click here to download ENSPPRG00000003424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000003424's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000003424	TRMT13	100	96.154	ENSG00000122435	TRMT13	100	96.154	Homo_sapiens
ENSPPRG00000003424	TRMT13	86	62.766	ENSAPOG00000015131	trmt13	99	48.589	Acanthochromis_polyacanthus
ENSPPRG00000003424	TRMT13	100	97.248	ENSAMEG00000008917	TRMT13	100	93.971	Ailuropoda_melanoleuca
ENSPPRG00000003424	TRMT13	100	54.128	ENSACIG00000005804	trmt13	99	50.758	Amphilophus_citrinellus
ENSPPRG00000003424	TRMT13	94	55.147	ENSAOCG00000023585	trmt13	99	49.200	Amphiprion_ocellaris
ENSPPRG00000003424	TRMT13	94	55.147	ENSAPEG00000004025	trmt13	99	49.105	Amphiprion_percula
ENSPPRG00000003424	TRMT13	96	61.905	ENSATEG00000006597	trmt13	99	51.016	Anabas_testudineus
ENSPPRG00000003424	TRMT13	88	68.310	ENSAPLG00000014924	TRMT13	99	68.310	Anas_platyrhynchos
ENSPPRG00000003424	TRMT13	98	67.290	ENSACAG00000003498	TRMT13	100	63.732	Anolis_carolinensis
ENSPPRG00000003424	TRMT13	100	92.661	ENSANAG00000019525	TRMT13	100	92.661	Aotus_nancymaae
ENSPPRG00000003424	TRMT13	98	53.521	ENSACLG00000020018	trmt13	99	52.754	Astatotilapia_calliptera
ENSPPRG00000003424	TRMT13	96	53.957	ENSAMXG00000017963	trmt13	97	54.468	Astyanax_mexicanus
ENSPPRG00000003424	TRMT13	100	93.555	ENSBTAG00000015781	TRMT13	100	93.555	Bos_taurus
ENSPPRG00000003424	TRMT13	100	92.661	ENSCJAG00000000200	TRMT13	99	92.661	Callithrix_jacchus
ENSPPRG00000003424	TRMT13	65	96.178	ENSCAFG00000020021	TRMT13	99	96.178	Canis_familiaris
ENSPPRG00000003424	TRMT13	100	93.636	ENSCAFG00020011572	TRMT13	95	96.364	Canis_lupus_dingo
ENSPPRG00000003424	TRMT13	100	93.347	ENSCHIG00000015395	TRMT13	100	93.347	Capra_hircus
ENSPPRG00000003424	TRMT13	100	93.846	ENSTSYG00000010811	TRMT13	100	93.846	Carlito_syrichta
ENSPPRG00000003424	TRMT13	75	68.871	ENSCAPG00000009085	TRMT13	100	69.315	Cavia_aperea
ENSPPRG00000003424	TRMT13	100	91.743	ENSCPOG00000000694	TRMT13	100	88.981	Cavia_porcellus
ENSPPRG00000003424	TRMT13	100	91.743	ENSCCAG00000023772	TRMT13	100	91.743	Cebus_capucinus
ENSPPRG00000003424	TRMT13	100	92.661	ENSCATG00000033556	TRMT13	100	92.661	Cercocebus_atys
ENSPPRG00000003424	TRMT13	89	83.607	ENSCLAG00000008220	TRMT13	100	84.309	Chinchilla_lanigera
ENSPPRG00000003424	TRMT13	100	92.661	ENSCSAG00000001506	TRMT13	100	92.100	Chlorocebus_sabaeus
ENSPPRG00000003424	TRMT13	100	70.478	ENSCPBG00000026671	TRMT13	100	70.478	Chrysemys_picta_bellii
ENSPPRG00000003424	TRMT13	100	93.578	ENSCANG00000034659	TRMT13	100	93.578	Colobus_angolensis_palliatus
ENSPPRG00000003424	TRMT13	100	85.455	ENSCGRG00001021601	Trmt13	99	85.655	Cricetulus_griseus_chok1gshd
ENSPPRG00000003424	TRMT13	53	82.490	ENSCGRG00000000093	-	99	82.490	Cricetulus_griseus_crigri
ENSPPRG00000003424	TRMT13	98	48.148	ENSCSEG00000000591	trmt13	98	48.060	Cynoglossus_semilaevis
ENSPPRG00000003424	TRMT13	98	51.748	ENSCVAG00000017342	trmt13	93	49.476	Cyprinodon_variegatus
ENSPPRG00000003424	TRMT13	95	57.543	ENSDARG00000102846	trmt13	96	57.543	Danio_rerio
ENSPPRG00000003424	TRMT13	100	84.956	ENSDNOG00000001710	TRMT13	85	89.568	Dasypus_novemcinctus
ENSPPRG00000003424	TRMT13	100	88.073	ENSDORG00000015808	Trmt13	99	86.902	Dipodomys_ordii
ENSPPRG00000003424	TRMT13	95	31.866	FBgn0037435	CG18048	94	31.866	Drosophila_melanogaster
ENSPPRG00000003424	TRMT13	99	86.607	ENSETEG00000005819	TRMT13	99	76.618	Echinops_telfairi
ENSPPRG00000003424	TRMT13	94	46.104	ENSEBUG00000014444	trmt13	96	46.104	Eptatretus_burgeri
ENSPPRG00000003424	TRMT13	100	96.330	ENSEASG00005015918	TRMT13	100	94.387	Equus_asinus_asinus
ENSPPRG00000003424	TRMT13	100	96.330	ENSECAG00000022626	TRMT13	100	93.971	Equus_caballus
ENSPPRG00000003424	TRMT13	96	86.667	ENSEEUG00000000294	TRMT13	80	81.646	Erinaceus_europaeus
ENSPPRG00000003424	TRMT13	96	56.115	ENSELUG00000003803	trmt13	98	55.769	Esox_lucius
ENSPPRG00000003424	TRMT13	100	100.000	ENSFCAG00000030618	TRMT13	100	100.000	Felis_catus
ENSPPRG00000003424	TRMT13	100	66.972	ENSFALG00000002424	TRMT13	99	65.272	Ficedula_albicollis
ENSPPRG00000003424	TRMT13	100	94.495	ENSFDAG00000006342	TRMT13	99	90.966	Fukomys_damarensis
ENSPPRG00000003424	TRMT13	98	48.252	ENSFHEG00000022954	trmt13	97	50.873	Fundulus_heteroclitus
ENSPPRG00000003424	TRMT13	96	48.507	ENSGMOG00000013223	trmt13	100	49.011	Gadus_morhua
ENSPPRG00000003424	TRMT13	95	67.253	ENSGALG00000005290	TRMT13	98	65.745	Gallus_gallus
ENSPPRG00000003424	TRMT13	98	48.951	ENSGAFG00000001577	trmt13	81	50.538	Gambusia_affinis
ENSPPRG00000003424	TRMT13	98	50.000	ENSGACG00000013428	trmt13	100	50.209	Gasterosteus_aculeatus
ENSPPRG00000003424	TRMT13	100	70.747	ENSGAGG00000023303	TRMT13	99	74.909	Gopherus_agassizii
ENSPPRG00000003424	TRMT13	100	91.476	ENSGGOG00000005616	TRMT13	100	91.476	Gorilla_gorilla
ENSPPRG00000003424	TRMT13	98	53.521	ENSHBUG00000007754	trmt13	99	52.754	Haplochromis_burtoni
ENSPPRG00000003424	TRMT13	100	95.413	ENSHGLG00000002164	TRMT13	99	91.176	Heterocephalus_glaber_female
ENSPPRG00000003424	TRMT13	100	95.413	ENSHGLG00100001618	TRMT13	99	91.176	Heterocephalus_glaber_male
ENSPPRG00000003424	TRMT13	98	46.667	ENSHCOG00000020553	trmt13	98	48.283	Hippocampus_comes
ENSPPRG00000003424	TRMT13	98	54.873	ENSIPUG00000024787	trmt13	100	55.252	Ictalurus_punctatus
ENSPPRG00000003424	TRMT13	100	96.330	ENSSTOG00000013483	TRMT13	100	92.931	Ictidomys_tridecemlineatus
ENSPPRG00000003424	TRMT13	100	88.991	ENSJJAG00000018012	Trmt13	100	87.526	Jaculus_jaculus
ENSPPRG00000003424	TRMT13	64	49.524	ENSKMAG00000007639	trmt13	92	49.673	Kryptolebias_marmoratus
ENSPPRG00000003424	TRMT13	98	52.113	ENSLBEG00000020238	trmt13	99	50.104	Labrus_bergylta
ENSPPRG00000003424	TRMT13	98	60.888	ENSLACG00000013153	TRMT13	100	60.149	Latimeria_chalumnae
ENSPPRG00000003424	TRMT13	95	59.348	ENSLOCG00000000418	trmt13	97	59.783	Lepisosteus_oculatus
ENSPPRG00000003424	TRMT13	77	89.189	ENSLAFG00000002383	TRMT13	100	89.189	Loxodonta_africana
ENSPPRG00000003424	TRMT13	100	93.578	ENSMFAG00000034681	TRMT13	100	93.578	Macaca_fascicularis
ENSPPRG00000003424	TRMT13	100	93.578	ENSMMUG00000004243	TRMT13	100	93.578	Macaca_mulatta
ENSPPRG00000003424	TRMT13	100	93.578	ENSMNEG00000036102	TRMT13	100	93.578	Macaca_nemestrina
ENSPPRG00000003424	TRMT13	100	94.495	ENSMLEG00000034258	TRMT13	100	94.495	Mandrillus_leucophaeus
ENSPPRG00000003424	TRMT13	96	50.844	ENSMAMG00000016597	trmt13	98	50.844	Mastacembelus_armatus
ENSPPRG00000003424	TRMT13	98	52.817	ENSMZEG00005020959	trmt13	99	52.542	Maylandia_zebra
ENSPPRG00000003424	TRMT13	89	67.447	ENSMGAG00000006970	TRMT13	100	67.447	Meleagris_gallopavo
ENSPPRG00000003424	TRMT13	99	84.375	ENSMAUG00000010448	Trmt13	99	84.375	Mesocricetus_auratus
ENSPPRG00000003424	TRMT13	100	96.154	ENSMICG00000005283	TRMT13	100	96.154	Microcebus_murinus
ENSPPRG00000003424	TRMT13	100	87.156	ENSMOCG00000019914	Trmt13	99	83.125	Microtus_ochrogaster
ENSPPRG00000003424	TRMT13	98	39.437	ENSMMOG00000007762	trmt13	89	50.943	Mola_mola
ENSPPRG00000003424	TRMT13	100	77.876	ENSMODG00000003646	TRMT13	100	76.749	Monodelphis_domestica
ENSPPRG00000003424	TRMT13	94	56.311	ENSMALG00000020965	trmt13	99	49.378	Monopterus_albus
ENSPPRG00000003424	TRMT13	100	87.156	MGP_CAROLIEiJ_G0025568	Trmt13	94	92.857	Mus_caroli
ENSPPRG00000003424	TRMT13	100	86.239	ENSMUSG00000033439	Trmt13	94	92.857	Mus_musculus
ENSPPRG00000003424	TRMT13	100	87.156	MGP_PahariEiJ_G0027014	Trmt13	93	93.373	Mus_pahari
ENSPPRG00000003424	TRMT13	100	86.239	MGP_SPRETEiJ_G0026518	Trmt13	94	92.857	Mus_spretus
ENSPPRG00000003424	TRMT13	79	91.076	ENSMPUG00000002078	-	100	91.076	Mustela_putorius_furo
ENSPPRG00000003424	TRMT13	100	96.330	ENSMPUG00000012169	-	98	94.737	Mustela_putorius_furo
ENSPPRG00000003424	TRMT13	100	92.661	ENSMLUG00000002124	TRMT13	100	80.873	Myotis_lucifugus
ENSPPRG00000003424	TRMT13	98	50.704	ENSNBRG00000006783	trmt13	95	49.134	Neolamprologus_brichardi
ENSPPRG00000003424	TRMT13	100	91.268	ENSNLEG00000035917	TRMT13	100	91.268	Nomascus_leucogenys
ENSPPRG00000003424	TRMT13	96	63.571	ENSMEUG00000013346	-	100	74.194	Notamacropus_eugenii
ENSPPRG00000003424	TRMT13	100	88.991	ENSOPRG00000012048	TRMT13	67	90.809	Ochotona_princeps
ENSPPRG00000003424	TRMT13	100	92.661	ENSODEG00000006075	-	95	92.216	Octodon_degus
ENSPPRG00000003424	TRMT13	100	52.294	ENSONIG00000004574	trmt13	99	52.542	Oreochromis_niloticus
ENSPPRG00000003424	TRMT13	89	74.246	ENSOANG00000012057	TRMT13	99	74.246	Ornithorhynchus_anatinus
ENSPPRG00000003424	TRMT13	100	90.852	ENSOCUG00000023095	TRMT13	100	90.852	Oryctolagus_cuniculus
ENSPPRG00000003424	TRMT13	96	47.872	ENSORLG00000003320	trmt13	99	48.511	Oryzias_latipes
ENSPPRG00000003424	TRMT13	95	47.957	ENSORLG00020005972	trmt13	97	48.211	Oryzias_latipes_hni
ENSPPRG00000003424	TRMT13	98	54.545	ENSORLG00015002270	trmt13	99	51.702	Oryzias_latipes_hsok
ENSPPRG00000003424	TRMT13	98	55.245	ENSOMEG00000006724	trmt13	94	52.340	Oryzias_melastigma
ENSPPRG00000003424	TRMT13	100	94.495	ENSOGAG00000005618	TRMT13	97	92.931	Otolemur_garnettii
ENSPPRG00000003424	TRMT13	100	93.347	ENSOARG00000017983	TRMT13	100	93.347	Ovis_aries
ENSPPRG00000003424	TRMT13	100	91.060	ENSPPAG00000043736	TRMT13	100	91.060	Pan_paniscus
ENSPPRG00000003424	TRMT13	100	100.000	ENSPTIG00000018598	TRMT13	100	100.000	Panthera_tigris_altaica
ENSPPRG00000003424	TRMT13	100	91.060	ENSPTRG00000001001	TRMT13	100	91.060	Pan_troglodytes
ENSPPRG00000003424	TRMT13	100	93.578	ENSPANG00000007598	TRMT13	100	93.578	Papio_anubis
ENSPPRG00000003424	TRMT13	99	54.947	ENSPKIG00000001514	trmt13	99	54.947	Paramormyrops_kingsleyae
ENSPPRG00000003424	TRMT13	96	67.143	ENSPSIG00000012703	TRMT13	99	71.942	Pelodiscus_sinensis
ENSPPRG00000003424	TRMT13	94	59.804	ENSPMGG00000013298	trmt13	95	51.266	Periophthalmus_magnuspinnatus
ENSPPRG00000003424	TRMT13	100	87.156	ENSPEMG00000000275	Trmt13	99	83.750	Peromyscus_maniculatus_bairdii
ENSPPRG00000003424	TRMT13	100	48.366	ENSPMAG00000000823	trmt13	100	44.512	Petromyzon_marinus
ENSPPRG00000003424	TRMT13	99	76.507	ENSPCIG00000007699	TRMT13	99	77.131	Phascolarctos_cinereus
ENSPPRG00000003424	TRMT13	99	48.434	ENSPFOG00000008675	trmt13	99	48.434	Poecilia_formosa
ENSPPRG00000003424	TRMT13	98	48.951	ENSPLAG00000009709	trmt13	99	48.408	Poecilia_latipinna
ENSPPRG00000003424	TRMT13	98	48.252	ENSPMEG00000022954	trmt13	99	47.335	Poecilia_mexicana
ENSPPRG00000003424	TRMT13	98	48.485	ENSPREG00000005645	trmt13	91	48.921	Poecilia_reticulata
ENSPPRG00000003424	TRMT13	100	91.060	ENSPPYG00000001120	TRMT13	100	91.060	Pongo_abelii
ENSPPRG00000003424	TRMT13	100	89.189	ENSPCAG00000002340	TRMT13	100	89.189	Procavia_capensis
ENSPPRG00000003424	TRMT13	100	93.578	ENSPCOG00000017984	TRMT13	100	93.578	Propithecus_coquereli
ENSPPRG00000003424	TRMT13	100	92.931	ENSPVAG00000017430	TRMT13	100	92.931	Pteropus_vampyrus
ENSPPRG00000003424	TRMT13	98	52.113	ENSPNYG00000013690	trmt13	99	50.636	Pundamilia_nyererei
ENSPPRG00000003424	TRMT13	94	63.107	ENSPNAG00000022130	trmt13	99	54.219	Pygocentrus_nattereri
ENSPPRG00000003424	TRMT13	100	87.156	ENSRNOG00000015140	Trmt13	96	86.192	Rattus_norvegicus
ENSPPRG00000003424	TRMT13	100	93.578	ENSRBIG00000037686	TRMT13	100	93.578	Rhinopithecus_bieti
ENSPPRG00000003424	TRMT13	100	93.578	ENSRROG00000044057	TRMT13	100	93.578	Rhinopithecus_roxellana
ENSPPRG00000003424	TRMT13	100	92.661	ENSSBOG00000026541	TRMT13	100	92.661	Saimiri_boliviensis_boliviensis
ENSPPRG00000003424	TRMT13	91	77.574	ENSSHAG00000005213	TRMT13	97	77.574	Sarcophilus_harrisii
ENSPPRG00000003424	TRMT13	96	56.115	ENSSFOG00015017560	trmt13	98	54.526	Scleropages_formosus
ENSPPRG00000003424	TRMT13	94	56.863	ENSSMAG00000014592	trmt13	99	49.898	Scophthalmus_maximus
ENSPPRG00000003424	TRMT13	98	50.000	ENSSDUG00000015508	trmt13	99	49.091	Seriola_dumerili
ENSPPRG00000003424	TRMT13	98	50.000	ENSSLDG00000019060	trmt13	98	48.671	Seriola_lalandi_dorsalis
ENSPPRG00000003424	TRMT13	97	85.849	ENSSARG00000010344	TRMT13	99	77.684	Sorex_araneus
ENSPPRG00000003424	TRMT13	96	68.251	ENSSPUG00000016339	TRMT13	100	68.251	Sphenodon_punctatus
ENSPPRG00000003424	TRMT13	98	52.817	ENSSPAG00000011922	trmt13	98	52.878	Stegastes_partitus
ENSPPRG00000003424	TRMT13	100	96.330	ENSSSCG00000006869	TRMT13	100	93.763	Sus_scrofa
ENSPPRG00000003424	TRMT13	97	66.453	ENSTGUG00000005253	TRMT13	100	66.453	Taeniopygia_guttata
ENSPPRG00000003424	TRMT13	98	48.592	ENSTRUG00000008400	trmt13	99	49.269	Takifugu_rubripes
ENSPPRG00000003424	TRMT13	86	76.202	ENSTBEG00000008911	TRMT13	100	76.202	Tupaia_belangeri
ENSPPRG00000003424	TRMT13	69	98.667	ENSTTRG00000015302	-	60	98.667	Tursiops_truncatus
ENSPPRG00000003424	TRMT13	100	94.495	ENSUAMG00000017251	TRMT13	100	87.942	Ursus_americanus
ENSPPRG00000003424	TRMT13	100	96.330	ENSUMAG00000007901	TRMT13	100	93.763	Ursus_maritimus
ENSPPRG00000003424	TRMT13	90	75.231	ENSVPAG00000001034	TRMT13	100	75.231	Vicugna_pacos
ENSPPRG00000003424	TRMT13	99	95.842	ENSVVUG00000021996	TRMT13	99	95.842	Vulpes_vulpes
ENSPPRG00000003424	TRMT13	98	55.634	ENSXETG00000013204	trmt13	96	56.550	Xenopus_tropicalis
ENSPPRG00000003424	TRMT13	87	56.250	ENSXCOG00000008120	-	88	56.250	Xiphophorus_couchianus
ENSPPRG00000003424	TRMT13	98	48.951	ENSXMAG00000010765	trmt13	99	47.146	Xiphophorus_maculatus