EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000003436 (Gene tree)
Gene ID: 109272306
Gene Symbol: STAU1
Alias: -
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 59353 bases
Position: chrKV860304.1:7170245-7229597
Accession: 109272306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000008580	dsrm	PF00035.26	1.5e-34	1	3
ENSPPRP00000008580	dsrm	PF00035.26	1.5e-34	2	3
ENSPPRP00000008580	dsrm	PF00035.26	1.5e-34	3	3
ENSPPRP00000008612	dsrm	PF00035.26	2e-34	1	3
ENSPPRP00000008612	dsrm	PF00035.26	2e-34	2	3
ENSPPRP00000008612	dsrm	PF00035.26	2e-34	3	3
ENSPPRP00000008606	dsrm	PF00035.26	1.7e-33	1	3
ENSPPRP00000008606	dsrm	PF00035.26	1.7e-33	2	3
ENSPPRP00000008606	dsrm	PF00035.26	1.7e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000006461	STAU1-203	3658	XM_019458190	ENSPPRP00000008606	577 (aa)	XP_019313735	UPI0009055C78
ENSPPRT00000006413	STAU1-201	1425	-	ENSPPRP00000008580	474 (aa)	-	UPI000DE7C68A
ENSPPRT00000006456	STAU1-202	3988	XM_019458201	ENSPPRP00000008612	496 (aa)	XP_019313746	UPI000298C8C6

Gene Model

Click here to download ENSPPRG00000003436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000003436's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000003436	STAU1	95	50.844	ENSPPRG00000024814	STAU2	96	53.207
ENSPPRG00000003436	STAU1	57	31.176	ENSPPRG00000011982	-	50	31.176

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000003436	STAU1	100	96.774	ENSG00000124214	STAU1	100	96.774	Homo_sapiens
ENSPPRG00000003436	STAU1	99	74.251	ENSAPOG00000017260	stau1	93	72.015	Acanthochromis_polyacanthus
ENSPPRG00000003436	STAU1	99	97.154	ENSAMEG00000013681	STAU1	95	93.396	Ailuropoda_melanoleuca
ENSPPRG00000003436	STAU1	99	75.202	ENSACIG00000015918	stau1	96	74.612	Amphilophus_citrinellus
ENSPPRG00000003436	STAU1	99	75.250	ENSAOCG00000012224	stau1	96	72.948	Amphiprion_ocellaris
ENSPPRG00000003436	STAU1	99	75.449	ENSAPEG00000012308	stau1	96	73.134	Amphiprion_percula
ENSPPRG00000003436	STAU1	99	75.855	ENSATEG00000024600	stau1	99	72.948	Anabas_testudineus
ENSPPRG00000003436	STAU1	99	88.755	ENSAPLG00000010527	STAU1	94	85.075	Anas_platyrhynchos
ENSPPRG00000003436	STAU1	99	88.176	ENSACAG00000015909	STAU1	95	84.544	Anolis_carolinensis
ENSPPRG00000003436	STAU1	100	95.883	ENSANAG00000032714	STAU1	100	95.883	Aotus_nancymaae
ENSPPRG00000003436	STAU1	99	74.052	ENSACLG00000012270	stau1	96	71.296	Astatotilapia_calliptera
ENSPPRG00000003436	STAU1	100	73.948	ENSAMXG00000016812	stau1	99	70.711	Astyanax_mexicanus
ENSPPRG00000003436	STAU1	100	95.841	ENSBTAG00000000241	STAU1	100	95.841	Bos_taurus
ENSPPRG00000003436	STAU1	100	96.976	ENSCJAG00000016233	STAU1	100	96.880	Callithrix_jacchus
ENSPPRG00000003436	STAU1	100	98.387	ENSCAFG00000011347	STAU1	100	97.093	Canis_familiaris
ENSPPRG00000003436	STAU1	100	97.093	ENSCAFG00020017123	STAU1	100	97.093	Canis_lupus_dingo
ENSPPRG00000003436	STAU1	100	95.841	ENSCHIG00000001799	-	100	95.841	Capra_hircus
ENSPPRG00000003436	STAU1	100	93.750	ENSTSYG00000036179	-	100	93.414	Carlito_syrichta
ENSPPRG00000003436	STAU1	100	92.742	ENSCAPG00000017041	STAU1	100	92.742	Cavia_aperea
ENSPPRG00000003436	STAU1	99	91.111	ENSCPOG00000005566	STAU1	100	91.111	Cavia_porcellus
ENSPPRG00000003436	STAU1	100	96.055	ENSCCAG00000034339	STAU1	100	96.055	Cebus_capucinus
ENSPPRG00000003436	STAU1	100	96.976	ENSCATG00000028474	STAU1	100	96.880	Cercocebus_atys
ENSPPRG00000003436	STAU1	100	78.514	ENSCLAG00000002784	-	100	78.514	Chinchilla_lanigera
ENSPPRG00000003436	STAU1	99	95.354	ENSCLAG00000006516	-	100	95.354	Chinchilla_lanigera
ENSPPRG00000003436	STAU1	100	96.774	ENSCSAG00000014986	STAU1	100	96.774	Chlorocebus_sabaeus
ENSPPRG00000003436	STAU1	100	96.194	ENSCHOG00000001511	STAU1	100	96.194	Choloepus_hoffmanni
ENSPPRG00000003436	STAU1	99	88.377	ENSCPBG00000026741	STAU1	96	84.730	Chrysemys_picta_bellii
ENSPPRG00000003436	STAU1	100	96.774	ENSCANG00000039220	STAU1	100	96.707	Colobus_angolensis_palliatus
ENSPPRG00000003436	STAU1	99	90.101	ENSCGRG00001013453	Stau1	100	90.101	Cricetulus_griseus_chok1gshd
ENSPPRG00000003436	STAU1	99	90.101	ENSCGRG00000007216	Stau1	100	90.101	Cricetulus_griseus_crigri
ENSPPRG00000003436	STAU1	99	67.677	ENSCSEG00000000792	stau1	95	66.292	Cynoglossus_semilaevis
ENSPPRG00000003436	STAU1	99	72.211	ENSCVAG00000005906	stau1	99	69.043	Cyprinodon_variegatus
ENSPPRG00000003436	STAU1	99	73.346	ENSDARG00000044182	stau1	96	73.346	Danio_rerio
ENSPPRG00000003436	STAU1	100	96.579	ENSDNOG00000014933	STAU1	98	96.540	Dasypus_novemcinctus
ENSPPRG00000003436	STAU1	99	91.207	ENSDORG00000030220	Stau1	100	91.207	Dipodomys_ordii
ENSPPRG00000003436	STAU1	88	94.089	ENSETEG00000018235	STAU1	88	94.089	Echinops_telfairi
ENSPPRG00000003436	STAU1	100	97.581	ENSEASG00005023343	STAU1	100	97.076	Equus_asinus_asinus
ENSPPRG00000003436	STAU1	100	97.782	ENSECAG00000012894	STAU1	100	97.574	Equus_caballus
ENSPPRG00000003436	STAU1	91	96.456	ENSEEUG00000014344	STAU1	80	96.456	Erinaceus_europaeus
ENSPPRG00000003436	STAU1	99	73.084	ENSELUG00000002529	stau1	93	71.910	Esox_lucius
ENSPPRG00000003436	STAU1	100	100.000	ENSFCAG00000001447	STAU1	100	100.000	Felis_catus
ENSPPRG00000003436	STAU1	99	87.627	ENSFALG00000012940	STAU1	96	83.992	Ficedula_albicollis
ENSPPRG00000003436	STAU1	99	93.939	ENSFDAG00000014119	-	100	93.939	Fukomys_damarensis
ENSPPRG00000003436	STAU1	100	74.214	ENSFDAG00000020837	-	100	74.214	Fukomys_damarensis
ENSPPRG00000003436	STAU1	99	73.653	ENSFHEG00000013517	stau1	96	73.581	Fundulus_heteroclitus
ENSPPRG00000003436	STAU1	99	63.250	ENSGMOG00000016850	stau1	96	63.842	Gadus_morhua
ENSPPRG00000003436	STAU1	99	90.264	ENSGALG00000004736	STAU1	96	86.441	Gallus_gallus
ENSPPRG00000003436	STAU1	99	73.852	ENSGAFG00000010437	stau1	96	73.973	Gambusia_affinis
ENSPPRG00000003436	STAU1	99	74.104	ENSGACG00000001352	stau1	96	71.508	Gasterosteus_aculeatus
ENSPPRG00000003436	STAU1	99	89.047	ENSGAGG00000009825	STAU1	96	85.311	Gopherus_agassizii
ENSPPRG00000003436	STAU1	100	95.817	ENSGGOG00000025351	STAU1	100	96.712	Gorilla_gorilla
ENSPPRG00000003436	STAU1	99	74.251	ENSHBUG00000023668	stau1	96	71.481	Haplochromis_burtoni
ENSPPRG00000003436	STAU1	99	96.115	ENSHGLG00000008730	STAU1	100	96.115	Heterocephalus_glaber_female
ENSPPRG00000003436	STAU1	99	96.115	ENSHGLG00100000098	STAU1	100	96.115	Heterocephalus_glaber_male
ENSPPRG00000003436	STAU1	99	71.630	ENSHCOG00000018461	stau1	92	70.703	Hippocampus_comes
ENSPPRG00000003436	STAU1	94	74.327	ENSIPUG00000023725	stau1	95	74.327	Ictalurus_punctatus
ENSPPRG00000003436	STAU1	99	95.501	ENSSTOG00000003634	STAU1	100	95.501	Ictidomys_tridecemlineatus
ENSPPRG00000003436	STAU1	99	93.661	ENSJJAG00000020032	Stau1	100	93.661	Jaculus_jaculus
ENSPPRG00000003436	STAU1	99	71.976	ENSKMAG00000007135	stau1	93	70.544	Kryptolebias_marmoratus
ENSPPRG00000003436	STAU1	99	72.727	ENSLBEG00000020172	stau1	96	70.425	Labrus_bergylta
ENSPPRG00000003436	STAU1	99	83.922	ENSLACG00000016157	STAU1	96	83.922	Latimeria_chalumnae
ENSPPRG00000003436	STAU1	99	80.080	ENSLOCG00000003134	stau1	96	77.383	Lepisosteus_oculatus
ENSPPRG00000003436	STAU1	100	94.758	ENSLAFG00000003238	STAU1	100	94.892	Loxodonta_africana
ENSPPRG00000003436	STAU1	100	96.976	ENSMFAG00000040931	STAU1	100	98.897	Macaca_fascicularis
ENSPPRG00000003436	STAU1	100	95.817	ENSMMUG00000002302	STAU1	100	98.897	Macaca_mulatta
ENSPPRG00000003436	STAU1	100	96.976	ENSMNEG00000033821	STAU1	100	96.880	Macaca_nemestrina
ENSPPRG00000003436	STAU1	100	96.976	ENSMLEG00000031383	STAU1	100	96.707	Mandrillus_leucophaeus
ENSPPRG00000003436	STAU1	99	76.056	ENSMAMG00000017586	stau1	99	74.053	Mastacembelus_armatus
ENSPPRG00000003436	STAU1	99	74.052	ENSMZEG00005015605	stau1	96	71.243	Maylandia_zebra
ENSPPRG00000003436	STAU1	99	88.956	ENSMGAG00000004719	STAU1	94	85.261	Meleagris_gallopavo
ENSPPRG00000003436	STAU1	99	90.505	ENSMAUG00000013846	Stau1	100	90.505	Mesocricetus_auratus
ENSPPRG00000003436	STAU1	100	94.168	ENSMICG00000001995	STAU1	100	94.168	Microcebus_murinus
ENSPPRG00000003436	STAU1	99	91.616	ENSMOCG00000018743	Stau1	100	91.515	Microtus_ochrogaster
ENSPPRG00000003436	STAU1	100	73.441	ENSMMOG00000015455	stau1	99	73.896	Mola_mola
ENSPPRG00000003436	STAU1	100	93.145	ENSMODG00000016276	STAU1	99	89.139	Monodelphis_domestica
ENSPPRG00000003436	STAU1	99	75.250	ENSMALG00000000045	stau1	96	72.948	Monopterus_albus
ENSPPRG00000003436	STAU1	99	92.025	MGP_CAROLIEiJ_G0024699	Stau1	100	92.025	Mus_caroli
ENSPPRG00000003436	STAU1	99	91.411	ENSMUSG00000039536	Stau1	100	91.411	Mus_musculus
ENSPPRG00000003436	STAU1	99	91.616	MGP_PahariEiJ_G0026141	Stau1	100	91.616	Mus_pahari
ENSPPRG00000003436	STAU1	99	91.002	MGP_SPRETEiJ_G0025619	Stau1	100	91.002	Mus_spretus
ENSPPRG00000003436	STAU1	99	98.577	ENSMPUG00000017581	STAU1	99	94.717	Mustela_putorius_furo
ENSPPRG00000003436	STAU1	100	96.371	ENSMLUG00000008407	STAU1	98	96.187	Myotis_lucifugus
ENSPPRG00000003436	STAU1	99	92.929	ENSNGAG00000007108	Stau1	100	92.929	Nannospalax_galili
ENSPPRG00000003436	STAU1	99	74.251	ENSNBRG00000017596	stau1	96	71.481	Neolamprologus_brichardi
ENSPPRG00000003436	STAU1	100	96.371	ENSNLEG00000006955	STAU1	100	96.360	Nomascus_leucogenys
ENSPPRG00000003436	STAU1	93	92.641	ENSMEUG00000003263	STAU1	99	84.991	Notamacropus_eugenii
ENSPPRG00000003436	STAU1	100	92.958	ENSOPRG00000014569	STAU1	100	88.986	Ochotona_princeps
ENSPPRG00000003436	STAU1	100	95.161	ENSODEG00000006523	STAU1	100	95.161	Octodon_degus
ENSPPRG00000003436	STAU1	99	74.451	ENSONIG00000004152	stau1	95	71.667	Oreochromis_niloticus
ENSPPRG00000003436	STAU1	99	87.776	ENSOANG00000006394	STAU1	96	84.358	Ornithorhynchus_anatinus
ENSPPRG00000003436	STAU1	100	94.758	ENSOCUG00000006214	STAU1	100	94.107	Oryctolagus_cuniculus
ENSPPRG00000003436	STAU1	99	72.745	ENSOMEG00000002388	stau1	96	70.225	Oryzias_melastigma
ENSPPRG00000003436	STAU1	99	65.726	ENSOGAG00000028222	-	99	65.726	Otolemur_garnettii
ENSPPRG00000003436	STAU1	100	95.968	ENSOGAG00000002127	STAU1	98	95.321	Otolemur_garnettii
ENSPPRG00000003436	STAU1	100	95.841	ENSOARG00000012204	STAU1	98	95.841	Ovis_aries
ENSPPRG00000003436	STAU1	100	95.817	ENSPPAG00000032023	STAU1	100	96.712	Pan_paniscus
ENSPPRG00000003436	STAU1	100	99.827	ENSPTIG00000011768	STAU1	100	99.827	Panthera_tigris_altaica
ENSPPRG00000003436	STAU1	100	95.817	ENSPTRG00000023130	STAU1	100	96.712	Pan_troglodytes
ENSPPRG00000003436	STAU1	100	96.774	ENSPANG00000020560	STAU1	100	96.707	Papio_anubis
ENSPPRG00000003436	STAU1	99	74.251	ENSPKIG00000024588	stau1	93	74.514	Paramormyrops_kingsleyae
ENSPPRG00000003436	STAU1	99	88.844	ENSPSIG00000010731	STAU1	95	85.122	Pelodiscus_sinensis
ENSPPRG00000003436	STAU1	99	75.351	ENSPMGG00000018553	stau1	99	73.517	Periophthalmus_magnuspinnatus
ENSPPRG00000003436	STAU1	99	90.707	ENSPEMG00000022045	Stau1	100	90.707	Peromyscus_maniculatus_bairdii
ENSPPRG00000003436	STAU1	100	93.145	ENSPCIG00000023269	STAU1	100	92.398	Phascolarctos_cinereus
ENSPPRG00000003436	STAU1	99	74.023	ENSPFOG00000017253	stau1	96	74.023	Poecilia_formosa
ENSPPRG00000003436	STAU1	63	68.671	ENSPLAG00000014829	stau1	81	70.552	Poecilia_latipinna
ENSPPRG00000003436	STAU1	94	73.333	ENSPMEG00000007495	stau1	94	73.333	Poecilia_mexicana
ENSPPRG00000003436	STAU1	99	73.438	ENSPREG00000003477	stau1	96	73.438	Poecilia_reticulata
ENSPPRG00000003436	STAU1	100	96.573	ENSPPYG00000011111	STAU1	100	96.360	Pongo_abelii
ENSPPRG00000003436	STAU1	94	87.868	ENSPCAG00000002459	STAU1	100	87.868	Procavia_capensis
ENSPPRG00000003436	STAU1	100	95.766	ENSPCOG00000027746	STAU1	100	95.667	Propithecus_coquereli
ENSPPRG00000003436	STAU1	86	96.370	ENSPVAG00000015019	STAU1	86	96.370	Pteropus_vampyrus
ENSPPRG00000003436	STAU1	99	74.251	ENSPNYG00000014436	stau1	96	71.481	Pundamilia_nyererei
ENSPPRG00000003436	STAU1	99	73.114	ENSPNAG00000011323	stau1	96	73.308	Pygocentrus_nattereri
ENSPPRG00000003436	STAU1	99	90.707	ENSRNOG00000007781	Stau1	100	90.707	Rattus_norvegicus
ENSPPRG00000003436	STAU1	100	95.817	ENSRBIG00000037345	STAU1	100	96.169	Rhinopithecus_bieti
ENSPPRG00000003436	STAU1	100	96.976	ENSRROG00000039008	STAU1	100	96.880	Rhinopithecus_roxellana
ENSPPRG00000003436	STAU1	100	97.177	ENSSBOG00000034448	STAU1	100	96.055	Saimiri_boliviensis_boliviensis
ENSPPRG00000003436	STAU1	100	93.145	ENSSHAG00000009492	STAU1	97	92.845	Sarcophilus_harrisii
ENSPPRG00000003436	STAU1	99	76.660	ENSSFOG00015021497	stau1	93	76.667	Scleropages_formosus
ENSPPRG00000003436	STAU1	99	75.250	ENSSMAG00000017410	stau1	96	72.761	Scophthalmus_maximus
ENSPPRG00000003436	STAU1	99	76.048	ENSSDUG00000019439	stau1	96	73.507	Seriola_dumerili
ENSPPRG00000003436	STAU1	99	76.048	ENSSLDG00000025040	stau1	93	73.507	Seriola_lalandi_dorsalis
ENSPPRG00000003436	STAU1	64	94.118	ENSSARG00000010389	-	64	94.118	Sorex_araneus
ENSPPRG00000003436	STAU1	99	87.776	ENSSPUG00000017983	STAU1	100	84.142	Sphenodon_punctatus
ENSPPRG00000003436	STAU1	99	75.449	ENSSPAG00000019275	stau1	93	73.134	Stegastes_partitus
ENSPPRG00000003436	STAU1	100	97.379	ENSSSCG00000027444	STAU1	100	97.379	Sus_scrofa
ENSPPRG00000003436	STAU1	99	87.375	ENSTGUG00000008784	STAU1	93	83.799	Taeniopygia_guttata
ENSPPRG00000003436	STAU1	99	75.453	ENSTRUG00000005837	stau1	93	75.734	Takifugu_rubripes
ENSPPRG00000003436	STAU1	99	73.852	ENSTNIG00000014732	stau1	95	73.025	Tetraodon_nigroviridis
ENSPPRG00000003436	STAU1	91	94.040	ENSTBEG00000009404	STAU1	100	82.353	Tupaia_belangeri
ENSPPRG00000003436	STAU1	93	93.074	ENSTTRG00000004285	STAU1	100	85.789	Tursiops_truncatus
ENSPPRG00000003436	STAU1	100	95.825	ENSUAMG00000025449	STAU1	100	95.825	Ursus_americanus
ENSPPRG00000003436	STAU1	75	94.709	ENSUMAG00000024475	STAU1	89	94.709	Ursus_maritimus
ENSPPRG00000003436	STAU1	100	97.177	ENSVPAG00000001313	STAU1	100	97.054	Vicugna_pacos
ENSPPRG00000003436	STAU1	100	97.287	ENSVVUG00000022325	STAU1	100	97.287	Vulpes_vulpes
ENSPPRG00000003436	STAU1	99	82.249	ENSXETG00000001783	stau1	96	79.323	Xenopus_tropicalis
ENSPPRG00000003436	STAU1	58	69.928	ENSXCOG00000008804	stau1	83	66.667	Xiphophorus_couchianus
ENSPPRG00000003436	STAU1	99	73.973	ENSXMAG00000016175	stau1	96	73.973	Xiphophorus_maculatus