EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000003449 (Gene tree)
Gene ID: 109278409
Gene Symbol: SRBD1
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 194663 bases
Position: chrKV860272.1:6611272-6805934
Accession: 109278409
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000008739	S1	PF00575.23	2.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000006586	SRBD1-201	3588	XM_019468785	ENSPPRP00000008739	995 (aa)	XP_019324330	UPI000904DAC0

Gene Model

Click here to download ENSPPRG00000003449's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000003449's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000003449	SRBD1	100	90.955	ENSG00000068784	SRBD1	100	90.955	Homo_sapiens
ENSPPRG00000003449	SRBD1	100	51.445	ENSAPOG00000005103	si:ch211-117n7.8	94	53.272	Acanthochromis_polyacanthus
ENSPPRG00000003449	SRBD1	100	96.181	ENSAMEG00000005993	SRBD1	100	96.181	Ailuropoda_melanoleuca
ENSPPRG00000003449	SRBD1	83	58.026	ENSACIG00000009875	si:ch211-117n7.8	85	57.981	Amphilophus_citrinellus
ENSPPRG00000003449	SRBD1	99	51.758	ENSAOCG00000024718	si:ch211-117n7.8	83	58.195	Amphiprion_ocellaris
ENSPPRG00000003449	SRBD1	83	58.314	ENSAPEG00000002645	si:ch211-117n7.8	86	58.314	Amphiprion_percula
ENSPPRG00000003449	SRBD1	99	51.973	ENSATEG00000010844	si:ch211-117n7.8	86	57.290	Anabas_testudineus
ENSPPRG00000003449	SRBD1	100	70.929	ENSAPLG00000006313	SRBD1	100	70.788	Anas_platyrhynchos
ENSPPRG00000003449	SRBD1	100	90.754	ENSANAG00000025573	SRBD1	100	90.754	Aotus_nancymaae
ENSPPRG00000003449	SRBD1	84	57.043	ENSACLG00000024219	si:ch211-117n7.8	83	57.159	Astatotilapia_calliptera
ENSPPRG00000003449	SRBD1	85	60.303	ENSAMXG00000004294	SRBD1	93	56.695	Astyanax_mexicanus
ENSPPRG00000003449	SRBD1	100	91.566	ENSBTAG00000007508	SRBD1	97	92.269	Bos_taurus
ENSPPRG00000003449	SRBD1	100	90.251	ENSCJAG00000000727	SRBD1	100	90.251	Callithrix_jacchus
ENSPPRG00000003449	SRBD1	100	95.085	ENSCAFG00000002554	SRBD1	100	95.085	Canis_familiaris
ENSPPRG00000003449	SRBD1	100	92.169	ENSCAFG00020026284	SRBD1	99	93.961	Canis_lupus_dingo
ENSPPRG00000003449	SRBD1	100	91.867	ENSCHIG00000016535	SRBD1	98	92.570	Capra_hircus
ENSPPRG00000003449	SRBD1	100	92.184	ENSTSYG00000012797	SRBD1	100	92.184	Carlito_syrichta
ENSPPRG00000003449	SRBD1	100	89.859	ENSCPOG00000004773	SRBD1	100	89.859	Cavia_porcellus
ENSPPRG00000003449	SRBD1	100	91.256	ENSCCAG00000025589	SRBD1	100	91.256	Cebus_capucinus
ENSPPRG00000003449	SRBD1	100	91.960	ENSCATG00000039530	SRBD1	100	91.960	Cercocebus_atys
ENSPPRG00000003449	SRBD1	100	90.882	ENSCLAG00000008623	SRBD1	100	90.882	Chinchilla_lanigera
ENSPPRG00000003449	SRBD1	100	92.161	ENSCSAG00000013350	SRBD1	100	92.161	Chlorocebus_sabaeus
ENSPPRG00000003449	SRBD1	93	78.015	ENSCHOG00000003805	SRBD1	93	78.015	Choloepus_hoffmanni
ENSPPRG00000003449	SRBD1	100	74.048	ENSCPBG00000005677	SRBD1	100	73.821	Chrysemys_picta_bellii
ENSPPRG00000003449	SRBD1	79	42.621	ENSCING00000005950	-	99	42.621	Ciona_intestinalis
ENSPPRG00000003449	SRBD1	79	42.947	ENSCSAVG00000000861	-	99	42.947	Ciona_savignyi
ENSPPRG00000003449	SRBD1	99	91.541	ENSCANG00000016307	SRBD1	99	91.541	Colobus_angolensis_palliatus
ENSPPRG00000003449	SRBD1	100	85.944	ENSCGRG00001000513	Srbd1	100	85.944	Cricetulus_griseus_chok1gshd
ENSPPRG00000003449	SRBD1	100	85.944	ENSCGRG00000002283	Srbd1	100	85.944	Cricetulus_griseus_crigri
ENSPPRG00000003449	SRBD1	85	55.950	ENSCSEG00000000856	si:ch211-117n7.8	86	56.064	Cynoglossus_semilaevis
ENSPPRG00000003449	SRBD1	83	57.075	ENSCVAG00000020212	si:ch211-117n7.8	89	57.075	Cyprinodon_variegatus
ENSPPRG00000003449	SRBD1	100	92.092	ENSDNOG00000018686	SRBD1	100	92.092	Dasypus_novemcinctus
ENSPPRG00000003449	SRBD1	100	88.442	ENSDORG00000010468	Srbd1	100	88.442	Dipodomys_ordii
ENSPPRG00000003449	SRBD1	94	34.434	FBgn0051156	CG31156	98	34.635	Drosophila_melanogaster
ENSPPRG00000003449	SRBD1	89	83.393	ENSETEG00000000739	SRBD1	91	83.393	Echinops_telfairi
ENSPPRG00000003449	SRBD1	73	48.435	ENSEBUG00000008902	si:ch211-117n7.8	96	48.435	Eptatretus_burgeri
ENSPPRG00000003449	SRBD1	100	91.265	ENSEASG00005003132	SRBD1	97	95.541	Equus_asinus_asinus
ENSPPRG00000003449	SRBD1	100	94.679	ENSECAG00000013865	SRBD1	98	94.679	Equus_caballus
ENSPPRG00000003449	SRBD1	96	55.193	ENSELUG00000012592	si:ch211-117n7.8	91	55.193	Esox_lucius
ENSPPRG00000003449	SRBD1	100	99.197	ENSFCAG00000005101	SRBD1	100	99.197	Felis_catus
ENSPPRG00000003449	SRBD1	100	68.831	ENSFALG00000012966	SRBD1	100	68.332	Ficedula_albicollis
ENSPPRG00000003449	SRBD1	98	88.181	ENSFDAG00000016670	SRBD1	98	88.462	Fukomys_damarensis
ENSPPRG00000003449	SRBD1	96	52.911	ENSFHEG00000019480	si:ch211-117n7.8	93	52.911	Fundulus_heteroclitus
ENSPPRG00000003449	SRBD1	50	52.252	ENSGMOG00000018010	-	100	52.252	Gadus_morhua
ENSPPRG00000003449	SRBD1	100	70.289	ENSGALG00000009990	SRBD1	100	69.595	Gallus_gallus
ENSPPRG00000003449	SRBD1	98	51.292	ENSGAFG00000019664	si:ch211-117n7.8	97	51.616	Gambusia_affinis
ENSPPRG00000003449	SRBD1	62	60.960	ENSGACG00000010794	si:ch211-117n7.8	100	61.120	Gasterosteus_aculeatus
ENSPPRG00000003449	SRBD1	84	81.437	ENSGAGG00000006166	SRBD1	99	81.437	Gopherus_agassizii
ENSPPRG00000003449	SRBD1	97	91.331	ENSGGOG00000005910	SRBD1	99	91.268	Gorilla_gorilla
ENSPPRG00000003449	SRBD1	90	48.835	ENSHBUG00000013207	si:ch211-117n7.8	86	50.948	Haplochromis_burtoni
ENSPPRG00000003449	SRBD1	99	89.728	ENSHGLG00000018153	-	99	89.728	Heterocephalus_glaber_female
ENSPPRG00000003449	SRBD1	99	89.527	ENSHGLG00100015183	-	99	89.527	Heterocephalus_glaber_male
ENSPPRG00000003449	SRBD1	85	61.268	ENSIPUG00000009661	srbd1	94	56.477	Ictalurus_punctatus
ENSPPRG00000003449	SRBD1	100	91.859	ENSSTOG00000005898	SRBD1	100	91.859	Ictidomys_tridecemlineatus
ENSPPRG00000003449	SRBD1	100	81.645	ENSJJAG00000022244	Srbd1	100	81.645	Jaculus_jaculus
ENSPPRG00000003449	SRBD1	99	51.707	ENSKMAG00000003473	si:ch211-117n7.8	93	53.026	Kryptolebias_marmoratus
ENSPPRG00000003449	SRBD1	98	51.518	ENSLBEG00000027518	si:ch211-117n7.8	93	52.826	Labrus_bergylta
ENSPPRG00000003449	SRBD1	85	71.277	ENSLACG00000009790	SRBD1	100	71.277	Latimeria_chalumnae
ENSPPRG00000003449	SRBD1	100	57.480	ENSLOCG00000016360	si:ch211-117n7.8	99	57.480	Lepisosteus_oculatus
ENSPPRG00000003449	SRBD1	100	92.261	ENSMFAG00000042026	SRBD1	100	92.261	Macaca_fascicularis
ENSPPRG00000003449	SRBD1	100	91.960	ENSMMUG00000003490	SRBD1	100	91.960	Macaca_mulatta
ENSPPRG00000003449	SRBD1	100	89.648	ENSMNEG00000034701	SRBD1	100	89.648	Macaca_nemestrina
ENSPPRG00000003449	SRBD1	100	91.859	ENSMLEG00000000745	SRBD1	100	91.859	Mandrillus_leucophaeus
ENSPPRG00000003449	SRBD1	86	55.632	ENSMAMG00000021921	si:ch211-117n7.8	86	55.632	Mastacembelus_armatus
ENSPPRG00000003449	SRBD1	84	57.043	ENSMZEG00005027369	si:ch211-117n7.8	83	57.159	Maylandia_zebra
ENSPPRG00000003449	SRBD1	80	75.754	ENSMGAG00000010273	SRBD1	99	75.754	Meleagris_gallopavo
ENSPPRG00000003449	SRBD1	79	87.331	ENSMAUG00000013916	Srbd1	99	84.834	Mesocricetus_auratus
ENSPPRG00000003449	SRBD1	100	93.273	ENSMICG00000007835	SRBD1	100	93.273	Microcebus_murinus
ENSPPRG00000003449	SRBD1	100	84.839	ENSMOCG00000018716	Srbd1	100	84.839	Microtus_ochrogaster
ENSPPRG00000003449	SRBD1	84	56.353	ENSMMOG00000007507	si:ch211-117n7.8	87	56.353	Mola_mola
ENSPPRG00000003449	SRBD1	99	51.317	ENSMALG00000001562	si:ch211-117n7.8	87	54.950	Monopterus_albus
ENSPPRG00000003449	SRBD1	100	82.412	MGP_CAROLIEiJ_G0021934	Srbd1	99	83.706	Mus_caroli
ENSPPRG00000003449	SRBD1	100	82.513	ENSMUSG00000024135	Srbd1	100	82.513	Mus_musculus
ENSPPRG00000003449	SRBD1	100	81.508	MGP_PahariEiJ_G0020924	Srbd1	100	81.508	Mus_pahari
ENSPPRG00000003449	SRBD1	100	82.814	MGP_SPRETEiJ_G0022850	Srbd1	100	82.814	Mus_spretus
ENSPPRG00000003449	SRBD1	100	89.458	ENSMLUG00000007039	SRBD1	100	89.458	Myotis_lucifugus
ENSPPRG00000003449	SRBD1	100	85.044	ENSNGAG00000011893	Srbd1	100	84.653	Nannospalax_galili
ENSPPRG00000003449	SRBD1	84	56.465	ENSNBRG00000012873	si:ch211-117n7.8	85	56.584	Neolamprologus_brichardi
ENSPPRG00000003449	SRBD1	100	91.256	ENSNLEG00000016877	SRBD1	100	91.256	Nomascus_leucogenys
ENSPPRG00000003449	SRBD1	100	87.035	ENSODEG00000012095	SRBD1	100	87.035	Octodon_degus
ENSPPRG00000003449	SRBD1	96	52.749	ENSONIG00000000945	si:ch211-117n7.8	99	58.293	Oreochromis_niloticus
ENSPPRG00000003449	SRBD1	100	93.072	ENSOCUG00000015385	SRBD1	100	93.072	Oryctolagus_cuniculus
ENSPPRG00000003449	SRBD1	85	53.502	ENSORLG00000004427	si:ch211-117n7.8	84	53.502	Oryzias_latipes
ENSPPRG00000003449	SRBD1	99	50.771	ENSORLG00020012792	si:ch211-117n7.8	84	56.307	Oryzias_latipes_hni
ENSPPRG00000003449	SRBD1	85	56.207	ENSORLG00015018598	si:ch211-117n7.8	84	56.207	Oryzias_latipes_hsok
ENSPPRG00000003449	SRBD1	96	51.537	ENSOMEG00000012229	si:ch211-117n7.8	93	51.689	Oryzias_melastigma
ENSPPRG00000003449	SRBD1	100	86.446	ENSOGAG00000001076	SRBD1	100	86.446	Otolemur_garnettii
ENSPPRG00000003449	SRBD1	100	87.100	ENSOARG00000005958	SRBD1	100	87.779	Ovis_aries
ENSPPRG00000003449	SRBD1	100	91.357	ENSPPAG00000038442	SRBD1	100	91.357	Pan_paniscus
ENSPPRG00000003449	SRBD1	100	99.799	ENSPTIG00000012495	SRBD1	100	99.799	Panthera_tigris_altaica
ENSPPRG00000003449	SRBD1	100	91.357	ENSPTRG00000011889	SRBD1	100	91.357	Pan_troglodytes
ENSPPRG00000003449	SRBD1	100	91.859	ENSPANG00000008063	SRBD1	100	91.859	Papio_anubis
ENSPPRG00000003449	SRBD1	83	60.337	ENSPKIG00000021973	si:ch211-117n7.8	85	60.337	Paramormyrops_kingsleyae
ENSPPRG00000003449	SRBD1	100	73.821	ENSPSIG00000008992	SRBD1	100	74.022	Pelodiscus_sinensis
ENSPPRG00000003449	SRBD1	90	53.166	ENSPMGG00000013348	si:ch211-117n7.8	98	51.487	Periophthalmus_magnuspinnatus
ENSPPRG00000003449	SRBD1	100	83.137	ENSPEMG00000020684	Srbd1	100	83.137	Peromyscus_maniculatus_bairdii
ENSPPRG00000003449	SRBD1	98	52.012	ENSPFOG00000010650	si:ch211-117n7.8	93	53.679	Poecilia_formosa
ENSPPRG00000003449	SRBD1	98	51.434	ENSPLAG00000002141	si:ch211-117n7.8	83	56.958	Poecilia_latipinna
ENSPPRG00000003449	SRBD1	98	52.208	ENSPMEG00000018537	si:ch211-117n7.8	93	53.886	Poecilia_mexicana
ENSPPRG00000003449	SRBD1	88	54.906	ENSPREG00000003258	si:ch211-117n7.8	91	54.906	Poecilia_reticulata
ENSPPRG00000003449	SRBD1	100	83.791	ENSPPYG00000012444	SRBD1	99	83.791	Pongo_abelii
ENSPPRG00000003449	SRBD1	82	83.024	ENSPCAG00000005629	SRBD1	85	83.024	Procavia_capensis
ENSPPRG00000003449	SRBD1	100	80.480	ENSPCOG00000017669	SRBD1	100	80.480	Propithecus_coquereli
ENSPPRG00000003449	SRBD1	100	83.819	ENSPVAG00000001782	SRBD1	100	83.819	Pteropus_vampyrus
ENSPPRG00000003449	SRBD1	84	54.363	ENSPNYG00000000508	si:ch211-117n7.8	86	54.481	Pundamilia_nyererei
ENSPPRG00000003449	SRBD1	96	57.601	ENSPNAG00000013492	SRBD1	95	57.601	Pygocentrus_nattereri
ENSPPRG00000003449	SRBD1	100	81.426	ENSRNOG00000014720	Srbd1	99	82.129	Rattus_norvegicus
ENSPPRG00000003449	SRBD1	99	91.440	ENSRBIG00000033486	SRBD1	99	91.440	Rhinopithecus_bieti
ENSPPRG00000003449	SRBD1	99	91.440	ENSRROG00000041599	SRBD1	99	91.440	Rhinopithecus_roxellana
ENSPPRG00000003449	SRBD1	100	90.854	ENSSBOG00000024982	SRBD1	100	90.854	Saimiri_boliviensis_boliviensis
ENSPPRG00000003449	SRBD1	83	60.024	ENSSFOG00015001128	si:ch211-117n7.8	90	59.882	Scleropages_formosus
ENSPPRG00000003449	SRBD1	89	55.214	ENSSMAG00000018256	si:ch211-117n7.8	89	54.811	Scophthalmus_maximus
ENSPPRG00000003449	SRBD1	86	56.372	ENSSLDG00000023189	si:ch211-117n7.8	85	56.357	Seriola_lalandi_dorsalis
ENSPPRG00000003449	SRBD1	100	80.000	ENSSARG00000009740	SRBD1	100	80.000	Sorex_araneus
ENSPPRG00000003449	SRBD1	85	79.384	ENSSPUG00000010475	SRBD1	98	76.828	Sphenodon_punctatus
ENSPPRG00000003449	SRBD1	84	55.112	ENSSPAG00000008092	-	84	55.582	Stegastes_partitus
ENSPPRG00000003449	SRBD1	100	92.972	ENSSSCG00000008445	SRBD1	98	93.574	Sus_scrofa
ENSPPRG00000003449	SRBD1	83	77.590	ENSTGUG00000003878	SRBD1	100	77.590	Taeniopygia_guttata
ENSPPRG00000003449	SRBD1	99	51.154	ENSTRUG00000007080	si:ch211-117n7.8	93	57.176	Takifugu_rubripes
ENSPPRG00000003449	SRBD1	99	50.244	ENSTNIG00000007464	si:ch211-117n7.8	97	50.706	Tetraodon_nigroviridis
ENSPPRG00000003449	SRBD1	83	98.936	ENSTBEG00000004556	SRBD1	82	98.936	Tupaia_belangeri
ENSPPRG00000003449	SRBD1	94	94.470	ENSTTRG00000011871	SRBD1	94	94.470	Tursiops_truncatus
ENSPPRG00000003449	SRBD1	100	95.783	ENSUAMG00000008126	SRBD1	97	99.275	Ursus_americanus
ENSPPRG00000003449	SRBD1	100	95.783	ENSUMAG00000012902	SRBD1	98	95.783	Ursus_maritimus
ENSPPRG00000003449	SRBD1	91	93.826	ENSVPAG00000006825	SRBD1	100	93.826	Vicugna_pacos
ENSPPRG00000003449	SRBD1	100	94.679	ENSVVUG00000005389	SRBD1	100	95.281	Vulpes_vulpes
ENSPPRG00000003449	SRBD1	100	52.273	ENSXETG00000002760	srbd1	100	52.367	Xenopus_tropicalis
ENSPPRG00000003449	SRBD1	98	51.186	ENSXMAG00000016861	si:ch211-117n7.8	88	54.746	Xiphophorus_maculatus