EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000003478 (Gene tree)
Gene ID: 109251232
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat-containing protein 1%2C mitochondrial-like
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 14825 bases
Position: chrKV860363.1:7441082-7455906
Accession: 109251232
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000008798	PPR	PF01535.20	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000006660	-	2100	XM_019422624	ENSPPRP00000008798	699 (aa)	XP_019278169	-

Gene Model

Click here to download ENSPPRG00000003478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000003478's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000003478	-	100	76.738	ENSG00000248919	ATP5MF-PTCD1	93	76.879	Homo_sapiens
ENSPPRG00000003478	-	100	76.738	ENSG00000106246	PTCD1	100	76.879	Homo_sapiens
ENSPPRG00000003478	-	85	46.179	ENSAPOG00000010679	ptcd1	89	46.179	Acanthochromis_polyacanthus
ENSPPRG00000003478	-	100	88.936	ENSAMEG00000006224	-	93	88.936	Ailuropoda_melanoleuca
ENSPPRG00000003478	-	86	49.259	ENSACIG00000017861	ptcd1	86	49.259	Amphilophus_citrinellus
ENSPPRG00000003478	-	86	47.282	ENSAOCG00000022617	ptcd1	88	47.282	Amphiprion_ocellaris
ENSPPRG00000003478	-	90	48.031	ENSAOCG00000020741	-	87	48.031	Amphiprion_ocellaris
ENSPPRG00000003478	-	90	47.559	ENSAPEG00000022632	ptcd1	87	47.559	Amphiprion_percula
ENSPPRG00000003478	-	87	50.575	ENSATEG00000007016	ptcd1	83	51.064	Anabas_testudineus
ENSPPRG00000003478	-	85	61.642	ENSAPLG00000006862	-	94	61.194	Anas_platyrhynchos
ENSPPRG00000003478	-	100	55.587	ENSACAG00000012871	-	93	55.587	Anolis_carolinensis
ENSPPRG00000003478	-	97	77.762	ENSANAG00000035790	-	99	77.907	Aotus_nancymaae
ENSPPRG00000003478	-	84	50.592	ENSACLG00000002824	ptcd1	80	50.592	Astatotilapia_calliptera
ENSPPRG00000003478	-	87	49.842	ENSAMXG00000037292	ptcd1	91	49.005	Astyanax_mexicanus
ENSPPRG00000003478	-	100	82.102	ENSBTAG00000020440	-	87	82.102	Bos_taurus
ENSPPRG00000003478	-	100	77.305	ENSCJAG00000015815	-	100	77.447	Callithrix_jacchus
ENSPPRG00000003478	-	100	88.511	ENSCAFG00000015055	-	93	88.511	Canis_familiaris
ENSPPRG00000003478	-	100	88.511	ENSCAFG00020014480	-	93	88.511	Canis_lupus_dingo
ENSPPRG00000003478	-	100	81.960	ENSCHIG00000027000	-	99	81.960	Capra_hircus
ENSPPRG00000003478	-	100	81.135	ENSTSYG00000029495	-	100	81.135	Carlito_syrichta
ENSPPRG00000003478	-	94	79.179	ENSCAPG00000014660	-	100	79.179	Cavia_aperea
ENSPPRG00000003478	-	100	78.865	ENSCPOG00000001780	-	100	78.865	Cavia_porcellus
ENSPPRG00000003478	-	100	75.779	ENSCCAG00000034025	-	100	76.771	Cebus_capucinus
ENSPPRG00000003478	-	100	76.204	ENSCATG00000040859	-	100	76.487	Cercocebus_atys
ENSPPRG00000003478	-	98	80.087	ENSCLAG00000006354	-	100	79.320	Chinchilla_lanigera
ENSPPRG00000003478	-	91	75.697	ENSCSAG00000017794	-	95	76.006	Chlorocebus_sabaeus
ENSPPRG00000003478	-	97	57.692	ENSCPBG00000020866	-	97	57.692	Chrysemys_picta_bellii
ENSPPRG00000003478	-	83	31.500	ENSCING00000007717	-	97	31.667	Ciona_intestinalis
ENSPPRG00000003478	-	100	75.994	ENSCANG00000023441	-	100	76.278	Colobus_angolensis_palliatus
ENSPPRG00000003478	-	100	76.454	ENSCGRG00001023686	Ptcd1	100	76.454	Cricetulus_griseus_chok1gshd
ENSPPRG00000003478	-	99	76.023	ENSCGRG00000015031	Ptcd1	100	76.023	Cricetulus_griseus_crigri
ENSPPRG00000003478	-	87	46.318	ENSCSEG00000002378	ptcd1	83	46.318	Cynoglossus_semilaevis
ENSPPRG00000003478	-	86	46.972	ENSCVAG00000003621	ptcd1	88	46.972	Cyprinodon_variegatus
ENSPPRG00000003478	-	84	47.993	ENSCVAG00000015826	ptcd1	81	47.993	Cyprinodon_variegatus
ENSPPRG00000003478	-	90	49.685	ENSDARG00000076176	ptcd1	90	49.685	Danio_rerio
ENSPPRG00000003478	-	100	77.997	ENSDNOG00000009957	-	100	79.437	Dasypus_novemcinctus
ENSPPRG00000003478	-	98	76.890	ENSDORG00000000740	Ptcd1	99	76.890	Dipodomys_ordii
ENSPPRG00000003478	-	88	41.805	ENSEBUG00000014515	ptcd1	97	43.031	Eptatretus_burgeri
ENSPPRG00000003478	-	100	85.493	ENSEASG00005002480	-	100	85.493	Equus_asinus_asinus
ENSPPRG00000003478	-	100	86.197	ENSECAG00000016617	-	100	86.197	Equus_caballus
ENSPPRG00000003478	-	86	46.614	ENSELUG00000016517	ptcd1	84	46.614	Esox_lucius
ENSPPRG00000003478	-	100	97.589	ENSFCAG00000015069	-	100	97.589	Felis_catus
ENSPPRG00000003478	-	88	61.129	ENSFALG00000013803	-	91	59.172	Ficedula_albicollis
ENSPPRG00000003478	-	100	77.447	ENSFDAG00000006393	-	100	77.447	Fukomys_damarensis
ENSPPRG00000003478	-	74	48.582	ENSFHEG00000012491	ptcd1	87	48.582	Fundulus_heteroclitus
ENSPPRG00000003478	-	83	47.521	ENSGMOG00000007639	ptcd1	91	47.521	Gadus_morhua
ENSPPRG00000003478	-	87	59.206	ENSGALG00000004711	-	88	58.411	Gallus_gallus
ENSPPRG00000003478	-	84	49.164	ENSGAFG00000013175	ptcd1	83	49.164	Gambusia_affinis
ENSPPRG00000003478	-	88	48.341	ENSGACG00000016607	ptcd1	91	48.796	Gasterosteus_aculeatus
ENSPPRG00000003478	-	83	61.395	ENSGAGG00000021832	-	88	60.396	Gopherus_agassizii
ENSPPRG00000003478	-	99	76.420	ENSGGOG00000015123	-	99	76.562	Gorilla_gorilla
ENSPPRG00000003478	-	84	50.423	ENSHBUG00000018275	ptcd1	80	50.423	Haplochromis_burtoni
ENSPPRG00000003478	-	100	78.470	ENSHGLG00000017621	-	100	78.470	Heterocephalus_glaber_female
ENSPPRG00000003478	-	100	78.470	ENSHGLG00100007218	-	100	78.470	Heterocephalus_glaber_male
ENSPPRG00000003478	-	84	47.700	ENSHCOG00000010784	ptcd1	82	47.708	Hippocampus_comes
ENSPPRG00000003478	-	100	78.090	ENSSTOG00000001682	-	100	78.090	Ictidomys_tridecemlineatus
ENSPPRG00000003478	-	100	75.857	ENSJJAG00000000319	Ptcd1	100	75.857	Jaculus_jaculus
ENSPPRG00000003478	-	89	47.528	ENSKMAG00000008708	ptcd1	85	47.544	Kryptolebias_marmoratus
ENSPPRG00000003478	-	83	48.061	ENSLBEG00000008061	ptcd1	80	48.061	Labrus_bergylta
ENSPPRG00000003478	-	91	56.049	ENSLACG00000011172	ptcd1	90	56.355	Latimeria_chalumnae
ENSPPRG00000003478	-	89	52.752	ENSLOCG00000004833	ptcd1	97	53.418	Lepisosteus_oculatus
ENSPPRG00000003478	-	100	73.521	ENSLAFG00000002588	-	100	74.225	Loxodonta_africana
ENSPPRG00000003478	-	100	76.062	ENSMFAG00000041324	-	100	76.346	Macaca_fascicularis
ENSPPRG00000003478	-	100	75.921	ENSMMUG00000030408	-	100	76.204	Macaca_mulatta
ENSPPRG00000003478	-	100	76.204	ENSMNEG00000043786	-	100	76.487	Macaca_nemestrina
ENSPPRG00000003478	-	100	56.700	ENSMLEG00000031179	-	100	59.406	Mandrillus_leucophaeus
ENSPPRG00000003478	-	85	50.842	ENSMAMG00000007623	ptcd1	80	50.842	Mastacembelus_armatus
ENSPPRG00000003478	-	84	49.327	ENSMZEG00005012722	ptcd1	80	49.327	Maylandia_zebra
ENSPPRG00000003478	-	99	56.286	ENSMGAG00000004211	-	92	56.286	Meleagris_gallopavo
ENSPPRG00000003478	-	100	79.574	ENSMICG00000017428	-	100	79.574	Microcebus_murinus
ENSPPRG00000003478	-	89	46.761	ENSMMOG00000020243	ptcd1	92	47.720	Mola_mola
ENSPPRG00000003478	-	99	61.277	ENSMODG00000001350	-	99	61.277	Monodelphis_domestica
ENSPPRG00000003478	-	89	49.603	ENSMALG00000018442	ptcd1	85	49.603	Monopterus_albus
ENSPPRG00000003478	-	99	77.810	MGP_CAROLIEiJ_G0028011	Ptcd1	99	77.954	Mus_caroli
ENSPPRG00000003478	-	99	77.666	ENSMUSG00000029624	Ptcd1	99	77.810	Mus_musculus
ENSPPRG00000003478	-	99	78.179	MGP_PahariEiJ_G0024580	Ptcd1	99	78.324	Mus_pahari
ENSPPRG00000003478	-	99	77.954	MGP_SPRETEiJ_G0029012	Ptcd1	99	78.098	Mus_spretus
ENSPPRG00000003478	-	100	88.227	ENSMPUG00000016518	-	100	88.936	Mustela_putorius_furo
ENSPPRG00000003478	-	100	83.685	ENSMLUG00000010994	-	94	85.070	Myotis_lucifugus
ENSPPRG00000003478	-	87	49.837	ENSNBRG00000010079	ptcd1	86	49.837	Neolamprologus_brichardi
ENSPPRG00000003478	-	100	80.399	ENSNLEG00000011060	-	100	80.399	Nomascus_leucogenys
ENSPPRG00000003478	-	98	61.844	ENSMEUG00000006930	-	99	61.844	Notamacropus_eugenii
ENSPPRG00000003478	-	90	77.674	ENSOPRG00000013647	-	90	77.674	Ochotona_princeps
ENSPPRG00000003478	-	84	49.069	ENSONIG00000003168	ptcd1	95	49.069	Oreochromis_niloticus
ENSPPRG00000003478	-	82	56.923	ENSOANG00000007728	-	75	56.923	Ornithorhynchus_anatinus
ENSPPRG00000003478	-	99	76.869	ENSOCUG00000010584	-	98	76.869	Oryctolagus_cuniculus
ENSPPRG00000003478	-	90	48.044	ENSORLG00000009275	ptcd1	89	48.044	Oryzias_latipes
ENSPPRG00000003478	-	90	47.500	ENSORLG00020000988	ptcd1	89	47.500	Oryzias_latipes_hni
ENSPPRG00000003478	-	90	47.161	ENSORLG00015010557	ptcd1	89	47.161	Oryzias_latipes_hsok
ENSPPRG00000003478	-	86	49.503	ENSOMEG00000020627	ptcd1	87	49.503	Oryzias_melastigma
ENSPPRG00000003478	-	99	76.681	ENSOGAG00000010877	-	100	76.681	Otolemur_garnettii
ENSPPRG00000003478	-	100	75.524	ENSOARG00000018676	-	100	75.524	Ovis_aries
ENSPPRG00000003478	-	100	76.312	ENSPPAG00000036024	-	100	76.312	Pan_paniscus
ENSPPRG00000003478	-	100	76.312	ENSPTRG00000019452	-	100	76.312	Pan_troglodytes
ENSPPRG00000003478	-	100	76.204	ENSPANG00000016730	-	100	76.487	Papio_anubis
ENSPPRG00000003478	-	95	49.852	ENSPKIG00000014215	ptcd1	95	49.852	Paramormyrops_kingsleyae
ENSPPRG00000003478	-	85	61.258	ENSPSIG00000011184	-	100	61.424	Pelodiscus_sinensis
ENSPPRG00000003478	-	74	41.874	ENSPMAG00000009667	ptcd1	100	41.874	Petromyzon_marinus
ENSPPRG00000003478	-	99	60.027	ENSPCIG00000024778	-	99	60.163	Phascolarctos_cinereus
ENSPPRG00000003478	-	84	49.164	ENSPFOG00000004458	ptcd1	82	49.164	Poecilia_formosa
ENSPPRG00000003478	-	84	49.581	ENSPLAG00000011051	ptcd1	82	49.581	Poecilia_latipinna
ENSPPRG00000003478	-	84	48.997	ENSPMEG00000020547	ptcd1	82	48.997	Poecilia_mexicana
ENSPPRG00000003478	-	83	49.404	ENSPREG00000000059	ptcd1	88	47.444	Poecilia_reticulata
ENSPPRG00000003478	-	95	77.225	ENSPPYG00000017377	-	99	77.225	Pongo_abelii
ENSPPRG00000003478	-	82	78.169	ENSPCAG00000001852	-	89	78.169	Procavia_capensis
ENSPPRG00000003478	-	100	79.716	ENSPCOG00000018596	-	100	79.716	Propithecus_coquereli
ENSPPRG00000003478	-	67	88.000	ENSPVAG00000007529	-	72	88.000	Pteropus_vampyrus
ENSPPRG00000003478	-	84	50.254	ENSPNYG00000019993	ptcd1	80	50.254	Pundamilia_nyererei
ENSPPRG00000003478	-	89	51.030	ENSPNAG00000014931	ptcd1	92	50.923	Pygocentrus_nattereri
ENSPPRG00000003478	-	99	77.858	ENSRNOG00000000987	Ptcd1	99	77.826	Rattus_norvegicus
ENSPPRG00000003478	-	100	76.136	ENSRBIG00000043393	-	100	76.420	Rhinopithecus_bieti
ENSPPRG00000003478	-	100	75.994	ENSRROG00000036420	-	100	76.278	Rhinopithecus_roxellana
ENSPPRG00000003478	-	100	77.589	ENSSBOG00000024114	-	100	77.730	Saimiri_boliviensis_boliviensis
ENSPPRG00000003478	-	99	57.604	ENSSHAG00000011376	-	99	61.991	Sarcophilus_harrisii
ENSPPRG00000003478	-	91	53.374	ENSSFOG00015007909	ptcd1	87	53.282	Scleropages_formosus
ENSPPRG00000003478	-	87	45.295	ENSSMAG00000000218	ptcd1	95	45.614	Scophthalmus_maximus
ENSPPRG00000003478	-	97	45.693	ENSSDUG00000015671	ptcd1	95	45.693	Seriola_dumerili
ENSPPRG00000003478	-	96	45.815	ENSSLDG00000014261	ptcd1	94	45.815	Seriola_lalandi_dorsalis
ENSPPRG00000003478	-	88	58.898	ENSSPUG00000003540	-	85	59.055	Sphenodon_punctatus
ENSPPRG00000003478	-	89	48.571	ENSSPAG00000011049	ptcd1	84	48.571	Stegastes_partitus
ENSPPRG00000003478	-	93	84.639	ENSSSCG00000007622	-	99	84.347	Sus_scrofa
ENSPPRG00000003478	-	88	60.940	ENSTGUG00000007563	-	99	61.912	Taeniopygia_guttata
ENSPPRG00000003478	-	84	48.649	ENSTRUG00000013471	ptcd1	79	48.649	Takifugu_rubripes
ENSPPRG00000003478	-	91	46.615	ENSTNIG00000008271	ptcd1	92	46.615	Tetraodon_nigroviridis
ENSPPRG00000003478	-	100	79.232	ENSTBEG00000011021	-	100	79.232	Tupaia_belangeri
ENSPPRG00000003478	-	100	81.909	ENSTTRG00000003006	-	100	81.909	Tursiops_truncatus
ENSPPRG00000003478	-	100	89.220	ENSUAMG00000008049	-	100	89.220	Ursus_americanus
ENSPPRG00000003478	-	99	89.174	ENSVVUG00000008836	-	100	89.174	Vulpes_vulpes
ENSPPRG00000003478	-	92	53.077	ENSXETG00000009891	ptcd1	93	52.719	Xenopus_tropicalis
ENSPPRG00000003478	-	84	49.412	ENSXMAG00000015540	ptcd1	82	49.412	Xiphophorus_maculatus