EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000003618 (Gene tree)
Gene ID: 109270973
Gene Symbol: RIF1
Alias: -
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 71084 bases
Position: chrKV860273.1:19773139-19844222
Accession: 109270973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000009003	Rif1_N	PF12231.8	2.4e-75	1	1
ENSPPRP00000009015	Rif1_N	PF12231.8	2.5e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000006870	RIF1-202	8424	XM_019456022	ENSPPRP00000009015	2480 (aa)	XP_019311567	UPI000904894D
ENSPPRT00000006862	RIF1-201	8346	XM_019456050	ENSPPRP00000009003	2454 (aa)	XP_019311595	UPI0009045F19

Gene Model

Click here to download ENSPPRG00000003618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000003618's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000003618	RIF1	100	79.445	ENSG00000080345	RIF1	97	89.781	Homo_sapiens
ENSPPRG00000003618	RIF1	99	88.437	ENSAMEG00000008461	RIF1	100	88.437	Ailuropoda_melanoleuca
ENSPPRG00000003618	RIF1	66	49.268	ENSACIG00000017765	rif1	73	49.268	Amphilophus_citrinellus
ENSPPRG00000003618	RIF1	65	47.802	ENSAOCG00000017231	rif1	66	47.731	Amphiprion_ocellaris
ENSPPRG00000003618	RIF1	61	55.627	ENSAPEG00000013228	rif1	65	55.627	Amphiprion_percula
ENSPPRG00000003618	RIF1	67	47.788	ENSATEG00000022887	rif1	69	47.476	Anabas_testudineus
ENSPPRG00000003618	RIF1	86	65.689	ENSAPLG00000007092	RIF1	95	65.689	Anas_platyrhynchos
ENSPPRG00000003618	RIF1	83	56.447	ENSACAG00000003714	RIF1	99	48.678	Anolis_carolinensis
ENSPPRG00000003618	RIF1	100	78.359	ENSANAG00000024840	RIF1	100	78.198	Aotus_nancymaae
ENSPPRG00000003618	RIF1	51	51.456	ENSAMXG00000010910	rif1	52	51.368	Astyanax_mexicanus
ENSPPRG00000003618	RIF1	94	81.717	ENSBTAG00000021020	RIF1	99	82.511	Bos_taurus
ENSPPRG00000003618	RIF1	100	77.755	ENSCJAG00000003138	RIF1	100	77.554	Callithrix_jacchus
ENSPPRG00000003618	RIF1	100	86.605	ENSCAFG00000005670	RIF1	97	86.645	Canis_familiaris
ENSPPRG00000003618	RIF1	100	85.548	ENSCAFG00020016401	RIF1	100	85.588	Canis_lupus_dingo
ENSPPRG00000003618	RIF1	100	81.562	ENSCHIG00000020327	RIF1	100	81.562	Capra_hircus
ENSPPRG00000003618	RIF1	99	76.982	ENSTSYG00000008861	RIF1	100	76.982	Carlito_syrichta
ENSPPRG00000003618	RIF1	79	73.843	ENSCAPG00000008957	RIF1	95	73.843	Cavia_aperea
ENSPPRG00000003618	RIF1	99	69.731	ENSCPOG00000037898	RIF1	99	69.892	Cavia_porcellus
ENSPPRG00000003618	RIF1	100	77.233	ENSCCAG00000024760	RIF1	100	77.072	Cebus_capucinus
ENSPPRG00000003618	RIF1	100	79.566	ENSCATG00000033353	RIF1	100	79.445	Cercocebus_atys
ENSPPRG00000003618	RIF1	96	73.247	ENSCLAG00000001517	RIF1	99	73.205	Chinchilla_lanigera
ENSPPRG00000003618	RIF1	100	79.686	ENSCSAG00000016089	RIF1	100	79.566	Chlorocebus_sabaeus
ENSPPRG00000003618	RIF1	97	74.348	ENSCHOG00000007187	RIF1	97	74.348	Choloepus_hoffmanni
ENSPPRG00000003618	RIF1	88	72.107	ENSCPBG00000025885	RIF1	96	72.700	Chrysemys_picta_bellii
ENSPPRG00000003618	RIF1	100	78.528	ENSCANG00000028962	RIF1	100	79.025	Colobus_angolensis_palliatus
ENSPPRG00000003618	RIF1	99	69.194	ENSCGRG00001024589	Rif1	100	69.073	Cricetulus_griseus_chok1gshd
ENSPPRG00000003618	RIF1	99	70.382	ENSCGRG00000010713	Rif1	100	70.260	Cricetulus_griseus_crigri
ENSPPRG00000003618	RIF1	62	54.086	ENSCSEG00000003945	rif1	67	54.086	Cynoglossus_semilaevis
ENSPPRG00000003618	RIF1	64	48.125	ENSCVAG00000022479	rif1	68	47.819	Cyprinodon_variegatus
ENSPPRG00000003618	RIF1	64	50.596	ENSDARG00000062650	rif1	67	50.712	Danio_rerio
ENSPPRG00000003618	RIF1	99	76.506	ENSDNOG00000011194	RIF1	97	76.506	Dasypus_novemcinctus
ENSPPRG00000003618	RIF1	94	72.858	ENSETEG00000012421	RIF1	92	72.403	Echinops_telfairi
ENSPPRG00000003618	RIF1	95	95.302	ENSEASG00005023434	RIF1	99	95.302	Equus_asinus_asinus
ENSPPRG00000003618	RIF1	97	93.051	ENSECAG00000012679	RIF1	100	93.051	Equus_caballus
ENSPPRG00000003618	RIF1	62	50.439	ENSELUG00000006826	rif1	56	50.394	Esox_lucius
ENSPPRG00000003618	RIF1	100	98.831	ENSFCAG00000029742	RIF1	100	98.831	Felis_catus
ENSPPRG00000003618	RIF1	76	64.401	ENSFALG00000013874	RIF1	89	64.725	Ficedula_albicollis
ENSPPRG00000003618	RIF1	99	73.873	ENSFDAG00000006538	RIF1	99	73.833	Fukomys_damarensis
ENSPPRG00000003618	RIF1	62	50.243	ENSFHEG00000013721	rif1	66	49.329	Fundulus_heteroclitus
ENSPPRG00000003618	RIF1	52	55.714	ENSGMOG00000003517	rif1	79	55.714	Gadus_morhua
ENSPPRG00000003618	RIF1	78	64.217	ENSGALG00000012484	RIF1	94	59.398	Gallus_gallus
ENSPPRG00000003618	RIF1	62	54.352	ENSGAFG00000017196	rif1	69	54.389	Gambusia_affinis
ENSPPRG00000003618	RIF1	59	55.102	ENSGACG00000008579	rif1	66	54.618	Gasterosteus_aculeatus
ENSPPRG00000003618	RIF1	88	71.772	ENSGAGG00000012595	RIF1	97	72.372	Gopherus_agassizii
ENSPPRG00000003618	RIF1	90	89.700	ENSGGOG00000040178	RIF1	96	89.700	Gorilla_gorilla
ENSPPRG00000003618	RIF1	60	56.067	ENSHBUG00000007125	rif1	66	56.067	Haplochromis_burtoni
ENSPPRG00000003618	RIF1	95	73.704	ENSHGLG00100009807	RIF1	99	73.780	Heterocephalus_glaber_male
ENSPPRG00000003618	RIF1	65	49.232	ENSHCOG00000015943	rif1	62	49.151	Hippocampus_comes
ENSPPRG00000003618	RIF1	50	51.822	ENSIPUG00000021703	rif1	53	50.572	Ictalurus_punctatus
ENSPPRG00000003618	RIF1	100	77.351	ENSSTOG00000020712	RIF1	100	77.502	Ictidomys_tridecemlineatus
ENSPPRG00000003618	RIF1	99	68.690	ENSJJAG00000023000	Rif1	100	68.730	Jaculus_jaculus
ENSPPRG00000003618	RIF1	64	49.451	ENSKMAG00000002852	rif1	67	49.451	Kryptolebias_marmoratus
ENSPPRG00000003618	RIF1	63	50.591	ENSLBEG00000023196	rif1	60	50.591	Labrus_bergylta
ENSPPRG00000003618	RIF1	85	63.018	ENSLACG00000005425	RIF1	89	63.018	Latimeria_chalumnae
ENSPPRG00000003618	RIF1	62	54.712	ENSLOCG00000002657	rif1	82	52.769	Lepisosteus_oculatus
ENSPPRG00000003618	RIF1	99	76.973	ENSLAFG00000009796	RIF1	100	76.973	Loxodonta_africana
ENSPPRG00000003618	RIF1	100	79.525	ENSMFAG00000032233	RIF1	100	79.405	Macaca_fascicularis
ENSPPRG00000003618	RIF1	100	79.566	ENSMMUG00000008611	RIF1	100	79.445	Macaca_mulatta
ENSPPRG00000003618	RIF1	100	79.606	ENSMNEG00000031616	RIF1	100	79.485	Macaca_nemestrina
ENSPPRG00000003618	RIF1	100	79.606	ENSMLEG00000042945	RIF1	100	79.485	Mandrillus_leucophaeus
ENSPPRG00000003618	RIF1	75	48.758	ENSMAMG00000001745	rif1	65	48.821	Mastacembelus_armatus
ENSPPRG00000003618	RIF1	64	50.624	ENSMZEG00005020920	rif1	70	50.546	Maylandia_zebra
ENSPPRG00000003618	RIF1	83	61.648	ENSMGAG00000012732	RIF1	91	61.756	Meleagris_gallopavo
ENSPPRG00000003618	RIF1	95	86.351	ENSMAUG00000013158	Rif1	99	86.351	Mesocricetus_auratus
ENSPPRG00000003618	RIF1	100	81.449	ENSMICG00000046127	RIF1	100	81.449	Microcebus_murinus
ENSPPRG00000003618	RIF1	99	68.770	ENSMOCG00000009381	Rif1	100	68.347	Microtus_ochrogaster
ENSPPRG00000003618	RIF1	65	49.719	ENSMMOG00000006519	rif1	67	49.078	Mola_mola
ENSPPRG00000003618	RIF1	100	59.476	ENSMODG00000003703	RIF1	100	59.476	Monodelphis_domestica
ENSPPRG00000003618	RIF1	58	52.269	ENSMALG00000016759	rif1	66	52.936	Monopterus_albus
ENSPPRG00000003618	RIF1	99	67.605	MGP_CAROLIEiJ_G0023555	Rif1	100	67.524	Mus_caroli
ENSPPRG00000003618	RIF1	99	68.297	ENSMUSG00000036202	Rif1	100	68.189	Mus_musculus
ENSPPRG00000003618	RIF1	99	67.564	MGP_PahariEiJ_G0025006	Rif1	100	67.363	Mus_pahari
ENSPPRG00000003618	RIF1	99	68.034	MGP_SPRETEiJ_G0024476	Rif1	100	67.926	Mus_spretus
ENSPPRG00000003618	RIF1	100	86.433	ENSMPUG00000000371	RIF1	100	86.433	Mustela_putorius_furo
ENSPPRG00000003618	RIF1	90	79.695	ENSMLUG00000003376	RIF1	100	79.695	Myotis_lucifugus
ENSPPRG00000003618	RIF1	100	72.072	ENSNGAG00000009268	Rif1	100	71.578	Nannospalax_galili
ENSPPRG00000003618	RIF1	64	49.079	ENSNBRG00000014257	rif1	69	49.653	Neolamprologus_brichardi
ENSPPRG00000003618	RIF1	100	78.794	ENSNLEG00000010955	RIF1	100	78.713	Nomascus_leucogenys
ENSPPRG00000003618	RIF1	78	79.464	ENSMEUG00000007601	-	85	79.464	Notamacropus_eugenii
ENSPPRG00000003618	RIF1	99	70.522	ENSODEG00000003950	RIF1	99	70.884	Octodon_degus
ENSPPRG00000003618	RIF1	66	50.313	ENSONIG00000013657	rif1	63	50.232	Oreochromis_niloticus
ENSPPRG00000003618	RIF1	79	75.235	ENSOANG00000006078	-	83	75.235	Ornithorhynchus_anatinus
ENSPPRG00000003618	RIF1	100	76.883	ENSOCUG00000017435	RIF1	100	76.762	Oryctolagus_cuniculus
ENSPPRG00000003618	RIF1	62	48.166	ENSORLG00020001302	rif1	67	47.975	Oryzias_latipes_hni
ENSPPRG00000003618	RIF1	62	47.895	ENSORLG00015000009	rif1	67	48.292	Oryzias_latipes_hsok
ENSPPRG00000003618	RIF1	61	49.157	ENSOMEG00000021513	rif1	67	48.685	Oryzias_melastigma
ENSPPRG00000003618	RIF1	99	77.827	ENSOGAG00000006141	RIF1	99	77.827	Otolemur_garnettii
ENSPPRG00000003618	RIF1	100	81.771	ENSOARG00000008930	RIF1	100	81.771	Ovis_aries
ENSPPRG00000003618	RIF1	100	79.445	ENSPPAG00000023754	RIF1	100	79.324	Pan_paniscus
ENSPPRG00000003618	RIF1	100	99.718	ENSPTIG00000020652	RIF1	100	99.718	Panthera_tigris_altaica
ENSPPRG00000003618	RIF1	100	79.405	ENSPTRG00000012534	RIF1	100	79.284	Pan_troglodytes
ENSPPRG00000003618	RIF1	100	79.445	ENSPANG00000008525	RIF1	100	79.324	Papio_anubis
ENSPPRG00000003618	RIF1	74	47.553	ENSPKIG00000004267	rif1	72	52.251	Paramormyrops_kingsleyae
ENSPPRG00000003618	RIF1	65	46.221	ENSPMGG00000016141	rif1	79	45.103	Periophthalmus_magnuspinnatus
ENSPPRG00000003618	RIF1	99	69.947	ENSPEMG00000000446	Rif1	99	69.460	Peromyscus_maniculatus_bairdii
ENSPPRG00000003618	RIF1	99	58.835	ENSPCIG00000009185	RIF1	99	61.649	Phascolarctos_cinereus
ENSPPRG00000003618	RIF1	65	51.479	ENSPFOG00000017804	rif1	69	51.677	Poecilia_formosa
ENSPPRG00000003618	RIF1	58	51.941	ENSPFOG00000000554	-	67	52.078	Poecilia_formosa
ENSPPRG00000003618	RIF1	66	51.028	ENSPLAG00000017945	rif1	72	50.870	Poecilia_latipinna
ENSPPRG00000003618	RIF1	55	50.343	ENSPMEG00000006897	-	65	50.490	Poecilia_mexicana
ENSPPRG00000003618	RIF1	66	50.156	ENSPREG00000018052	rif1	68	54.356	Poecilia_reticulata
ENSPPRG00000003618	RIF1	100	79.445	ENSPPYG00000012846	RIF1	100	79.324	Pongo_abelii
ENSPPRG00000003618	RIF1	83	83.495	ENSPCAG00000009032	RIF1	83	83.495	Procavia_capensis
ENSPPRG00000003618	RIF1	100	81.087	ENSPCOG00000027888	RIF1	100	81.087	Propithecus_coquereli
ENSPPRG00000003618	RIF1	93	90.061	ENSPVAG00000014276	RIF1	95	90.061	Pteropus_vampyrus
ENSPPRG00000003618	RIF1	64	48.782	ENSPNYG00000012940	rif1	69	48.704	Pundamilia_nyererei
ENSPPRG00000003618	RIF1	62	52.516	ENSPNAG00000016685	rif1	64	52.516	Pygocentrus_nattereri
ENSPPRG00000003618	RIF1	99	67.482	ENSRNOG00000054901	Rif1	100	67.415	Rattus_norvegicus
ENSPPRG00000003618	RIF1	100	78.560	ENSRBIG00000003704	RIF1	100	78.479	Rhinopithecus_bieti
ENSPPRG00000003618	RIF1	100	79.566	ENSRROG00000028206	RIF1	100	79.485	Rhinopithecus_roxellana
ENSPPRG00000003618	RIF1	100	74.347	ENSSBOG00000029530	RIF1	100	74.226	Saimiri_boliviensis_boliviensis
ENSPPRG00000003618	RIF1	99	58.802	ENSSHAG00000018552	RIF1	100	58.005	Sarcophilus_harrisii
ENSPPRG00000003618	RIF1	65	52.535	ENSSFOG00015021539	rif1	73	51.504	Scleropages_formosus
ENSPPRG00000003618	RIF1	70	49.341	ENSSMAG00000011704	rif1	67	48.905	Scophthalmus_maximus
ENSPPRG00000003618	RIF1	64	50.725	ENSSDUG00000015632	rif1	70	49.922	Seriola_dumerili
ENSPPRG00000003618	RIF1	61	86.486	ENSSARG00000007161	-	62	81.695	Sorex_araneus
ENSPPRG00000003618	RIF1	85	62.530	ENSSPUG00000003062	RIF1	93	62.530	Sphenodon_punctatus
ENSPPRG00000003618	RIF1	50	57.260	ENSSPAG00000018359	rif1	76	57.260	Stegastes_partitus
ENSPPRG00000003618	RIF1	100	82.367	ENSSSCG00000016395	RIF1	100	82.367	Sus_scrofa
ENSPPRG00000003618	RIF1	64	49.449	ENSTRUG00000015808	rif1	70	49.449	Takifugu_rubripes
ENSPPRG00000003618	RIF1	66	47.939	ENSTNIG00000011538	rif1	72	47.786	Tetraodon_nigroviridis
ENSPPRG00000003618	RIF1	83	89.241	ENSTBEG00000016082	RIF1	82	89.241	Tupaia_belangeri
ENSPPRG00000003618	RIF1	100	83.977	ENSTTRG00000011190	RIF1	100	83.977	Tursiops_truncatus
ENSPPRG00000003618	RIF1	86	94.344	ENSUAMG00000026385	RIF1	97	94.344	Ursus_americanus
ENSPPRG00000003618	RIF1	96	94.341	ENSUMAG00000000337	RIF1	99	94.341	Ursus_maritimus
ENSPPRG00000003618	RIF1	100	80.830	ENSVPAG00000002162	RIF1	100	80.749	Vicugna_pacos
ENSPPRG00000003618	RIF1	100	85.956	ENSVVUG00000011293	RIF1	100	85.875	Vulpes_vulpes
ENSPPRG00000003618	RIF1	83	61.329	ENSXETG00000004530	rif1	84	61.329	Xenopus_tropicalis
ENSPPRG00000003618	RIF1	66	47.853	ENSXMAG00000000506	rif1	67	47.853	Xiphophorus_maculatus