EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000003675 (Gene tree)
Gene ID: 109265578
Gene Symbol: -
Alias: -
Full Name: DNA dC->dU-editing enzyme APOBEC-3C-like
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 6012 bases
Position: chrKV860285.1:23978765-23984776
Accession: 109265578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000009123	APOBEC_N	PF08210.11	2.7e-47	1	1
ENSPPRP00000009123	APOBEC_C	PF05240.14	2.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000006987	-	944	XM_019446912	ENSPPRP00000009123	191 (aa)	XP_019302457	UPI00090470C0

Gene Model

Click here to download ENSPPRG00000003675's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000003675's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000003675	-	94	35.326	ENSPPRG00000003941	-	92	35.326
ENSPPRG00000003675	-	96	100.000	ENSPPRG00000003726	-	98	100.000
ENSPPRG00000003675	-	94	32.973	ENSPPRG00000008530	APOBEC2	80	35.135
ENSPPRG00000003675	-	92	40.223	ENSPPRG00000012985	AICDA	88	40.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000003675	-	88	34.682	ENSG00000100298	APOBEC3H	92	35.260	Homo_sapiens
ENSPPRG00000003675	-	99	65.789	ENSAMEG00000010818	-	85	65.789	Ailuropoda_melanoleuca
ENSPPRG00000003675	-	83	36.905	ENSANAG00000025410	APOBEC3H	71	36.905	Aotus_nancymaae
ENSPPRG00000003675	-	98	46.842	ENSBTAG00000007755	APOBEC3H	96	46.842	Bos_taurus
ENSPPRG00000003675	-	82	36.538	ENSCJAG00000012524	APOBEC3H	89	35.000	Callithrix_jacchus
ENSPPRG00000003675	-	94	33.514	ENSCAFG00000001361	APOBEC3Z3	93	33.514	Canis_familiaris
ENSPPRG00000003675	-	94	32.432	ENSCAFG00020002584	-	92	32.432	Canis_lupus_dingo
ENSPPRG00000003675	-	95	51.381	ENSCHIG00000026580	-	96	51.381	Capra_hircus
ENSPPRG00000003675	-	79	38.961	ENSTSYG00000032894	-	85	38.816	Carlito_syrichta
ENSPPRG00000003675	-	98	44.211	ENSCPOG00000009257	-	87	44.211	Cavia_porcellus
ENSPPRG00000003675	-	82	35.802	ENSCCAG00000008525	APOBEC3H	89	34.932	Cebus_capucinus
ENSPPRG00000003675	-	81	38.750	ENSCATG00000030302	APOBEC3H	89	37.671	Cercocebus_atys
ENSPPRG00000003675	-	93	35.714	ENSCLAG00000016615	-	87	35.714	Chinchilla_lanigera
ENSPPRG00000003675	-	81	39.241	ENSCSAG00000006371	APOBEC3H	72	39.241	Chlorocebus_sabaeus
ENSPPRG00000003675	-	99	45.641	ENSCGRG00001022976	Apobec3	89	45.641	Cricetulus_griseus_chok1gshd
ENSPPRG00000003675	-	96	50.781	ENSCGRG00000005621	Apobec3	89	45.641	Cricetulus_griseus_crigri
ENSPPRG00000003675	-	95	44.253	ENSDORG00000027271	-	100	45.918	Dipodomys_ordii
ENSPPRG00000003675	-	97	33.333	ENSECAG00000007726	APOBEC3H	79	33.333	Equus_caballus
ENSPPRG00000003675	-	83	37.107	ENSFCAG00000005251	APOBEC3Z3	79	37.107	Felis_catus
ENSPPRG00000003675	-	81	40.764	ENSSTOG00000007125	-	72	40.764	Ictidomys_tridecemlineatus
ENSPPRG00000003675	-	100	44.560	ENSJJAG00000016840	-	86	44.560	Jaculus_jaculus
ENSPPRG00000003675	-	96	43.243	ENSLAFG00000027404	-	97	43.243	Loxodonta_africana
ENSPPRG00000003675	-	81	38.608	ENSMFAG00000031827	APOBEC3H	89	37.500	Macaca_fascicularis
ENSPPRG00000003675	-	88	35.714	ENSMMUG00000001016	APOBEC3H	89	37.500	Macaca_mulatta
ENSPPRG00000003675	-	81	38.608	ENSMNEG00000039259	APOBEC3H	89	37.500	Macaca_nemestrina
ENSPPRG00000003675	-	81	37.975	ENSMLEG00000033417	APOBEC3H	89	36.806	Mandrillus_leucophaeus
ENSPPRG00000003675	-	98	45.556	ENSMAUG00000011683	Apobec3	88	45.556	Mesocricetus_auratus
ENSPPRG00000003675	-	96	45.810	ENSMOCG00000021576	Apobec3	80	45.810	Microtus_ochrogaster
ENSPPRG00000003675	-	100	40.845	MGP_CAROLIEiJ_G0020029	Apobec3	98	46.988	Mus_caroli
ENSPPRG00000003675	-	94	46.465	ENSMUSG00000009585	Apobec3	98	45.783	Mus_musculus
ENSPPRG00000003675	-	100	39.906	MGP_PahariEiJ_G0020031	-	91	39.623	Mus_pahari
ENSPPRG00000003675	-	100	40.376	MGP_SPRETEiJ_G0020927	Apobec3	98	45.783	Mus_spretus
ENSPPRG00000003675	-	99	65.263	ENSMPUG00000013239	-	96	65.263	Mustela_putorius_furo
ENSPPRG00000003675	-	99	38.756	ENSNGAG00000018998	Apobec3	87	44.444	Nannospalax_galili
ENSPPRG00000003675	-	88	35.057	ENSNLEG00000015218	-	79	35.057	Nomascus_leucogenys
ENSPPRG00000003675	-	94	45.355	ENSOCUG00000023913	-	74	45.355	Oryctolagus_cuniculus
ENSPPRG00000003675	-	95	51.381	ENSOARG00000016290	APOBEC3F	97	51.381	Ovis_aries
ENSPPRG00000003675	-	88	34.682	ENSPPAG00000036522	APOBEC3H	89	34.965	Pan_paniscus
ENSPPRG00000003675	-	94	35.326	ENSPTIG00000010283	-	92	35.326	Panthera_tigris_altaica
ENSPPRG00000003675	-	88	34.682	ENSPTRG00000014390	APOBEC3H	89	34.965	Pan_troglodytes
ENSPPRG00000003675	-	81	39.623	ENSPANG00000010774	APOBEC3H	89	38.194	Papio_anubis
ENSPPRG00000003675	-	100	41.038	ENSPEMG00000000456	Apobec3	88	41.038	Peromyscus_maniculatus_bairdii
ENSPPRG00000003675	-	81	37.736	ENSPPYG00000011834	-	72	37.736	Pongo_abelii
ENSPPRG00000003675	-	69	34.091	ENSPCAG00000015655	-	76	34.091	Procavia_capensis
ENSPPRG00000003675	-	93	34.615	ENSPVAG00000009462	-	99	34.615	Pteropus_vampyrus
ENSPPRG00000003675	-	65	52.000	ENSPVAG00000024267	-	95	52.000	Pteropus_vampyrus
ENSPPRG00000003675	-	66	51.969	ENSPVAG00000024161	-	96	51.969	Pteropus_vampyrus
ENSPPRG00000003675	-	98	42.784	ENSRNOG00000016852	Apobec3	89	42.784	Rattus_norvegicus
ENSPPRG00000003675	-	81	38.994	ENSRBIG00000029088	APOBEC3H	89	38.356	Rhinopithecus_bieti
ENSPPRG00000003675	-	82	39.130	ENSRROG00000024699	APOBEC3H	89	38.356	Rhinopithecus_roxellana
ENSPPRG00000003675	-	82	36.646	ENSSBOG00000030005	APOBEC3H	99	35.172	Saimiri_boliviensis_boliviensis
ENSPPRG00000003675	-	98	49.215	ENSSSCG00000000091	APOBEC3B	88	49.215	Sus_scrofa
ENSPPRG00000003675	-	73	37.143	ENSTBEG00000001532	-	81	37.143	Tupaia_belangeri
ENSPPRG00000003675	-	94	34.783	ENSTTRG00000001266	-	99	34.783	Tursiops_truncatus
ENSPPRG00000003675	-	95	34.392	ENSUAMG00000004427	-	85	34.392	Ursus_americanus
ENSPPRG00000003675	-	95	35.676	ENSUMAG00000014435	-	91	35.676	Ursus_maritimus
ENSPPRG00000003675	-	64	36.290	ENSVPAG00000011108	-	97	36.290	Vicugna_pacos