EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000003941 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC109265241
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 38549 bases
Position: chrKV860285.1:23961609-24000157
Accession: 109265241
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000009485	APOBEC_N	PF08210.11	2.2e-40	1	1
ENSPPRP00000009485	APOBEC_C	PF05240.14	5.7e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000007361	-	3005	XM_019446347	ENSPPRP00000009485	194 (aa)	XP_019301892	A9QA29

Gene Model

Click here to download ENSPPRG00000003941's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000003941's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000003941	-	87	36.571	ENSPPRG00000012985	AICDA	88	36.571
ENSPPRG00000003941	-	92	35.326	ENSPPRG00000003675	-	94	35.326
ENSPPRG00000003941	-	68	34.848	ENSPPRG00000012182	APOBEC1	56	34.848
ENSPPRG00000003941	-	92	35.326	ENSPPRG00000003726	-	96	35.326

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000003941	-	93	50.543	ENSG00000100298	APOBEC3H	99	51.381	Homo_sapiens
ENSPPRG00000003941	-	99	62.814	ENSAMEG00000010818	-	81	62.814	Ailuropoda_melanoleuca
ENSPPRG00000003941	-	99	51.980	ENSANAG00000025410	APOBEC3H	90	51.980	Aotus_nancymaae
ENSPPRG00000003941	-	95	62.778	ENSBTAG00000007755	APOBEC3H	94	62.778	Bos_taurus
ENSPPRG00000003941	-	91	51.934	ENSCJAG00000012524	APOBEC3H	91	51.064	Callithrix_jacchus
ENSPPRG00000003941	-	99	69.430	ENSCAFG00000001361	APOBEC3Z3	100	69.430	Canis_familiaris
ENSPPRG00000003941	-	95	65.761	ENSCAFG00020002584	-	92	67.416	Canis_lupus_dingo
ENSPPRG00000003941	-	95	63.128	ENSCHIG00000026580	-	96	63.128	Capra_hircus
ENSPPRG00000003941	-	90	54.023	ENSTSYG00000032894	-	99	54.023	Carlito_syrichta
ENSPPRG00000003941	-	99	51.562	ENSCPOG00000009257	-	89	51.562	Cavia_porcellus
ENSPPRG00000003941	-	99	50.500	ENSCCAG00000008525	APOBEC3H	94	51.000	Cebus_capucinus
ENSPPRG00000003941	-	93	52.717	ENSCATG00000030302	APOBEC3H	99	53.039	Cercocebus_atys
ENSPPRG00000003941	-	98	53.093	ENSCLAG00000016615	-	96	53.093	Chinchilla_lanigera
ENSPPRG00000003941	-	99	52.261	ENSCSAG00000006371	APOBEC3H	94	52.261	Chlorocebus_sabaeus
ENSPPRG00000003941	-	98	55.385	ENSCGRG00001022976	Apobec3	86	55.385	Cricetulus_griseus_chok1gshd
ENSPPRG00000003941	-	98	55.385	ENSCGRG00000005621	Apobec3	88	55.385	Cricetulus_griseus_crigri
ENSPPRG00000003941	-	90	54.494	ENSDORG00000027271	-	87	54.494	Dipodomys_ordii
ENSPPRG00000003941	-	98	59.585	ENSECAG00000007726	APOBEC3H	83	59.585	Equus_caballus
ENSPPRG00000003941	-	100	94.845	ENSFCAG00000005251	APOBEC3Z3	100	94.845	Felis_catus
ENSPPRG00000003941	-	94	53.226	ENSSTOG00000007125	-	88	53.226	Ictidomys_tridecemlineatus
ENSPPRG00000003941	-	83	51.852	ENSJJAG00000016840	-	74	51.852	Jaculus_jaculus
ENSPPRG00000003941	-	92	52.571	ENSLAFG00000027404	-	94	52.571	Loxodonta_africana
ENSPPRG00000003941	-	99	52.020	ENSMFAG00000031827	APOBEC3H	94	52.020	Macaca_fascicularis
ENSPPRG00000003941	-	99	52.525	ENSMMUG00000001016	APOBEC3H	94	52.525	Macaca_mulatta
ENSPPRG00000003941	-	99	52.020	ENSMNEG00000039259	APOBEC3H	94	52.020	Macaca_nemestrina
ENSPPRG00000003941	-	99	51.759	ENSMLEG00000033417	APOBEC3H	92	53.804	Mandrillus_leucophaeus
ENSPPRG00000003941	-	98	54.872	ENSMAUG00000011683	Apobec3	91	54.872	Mesocricetus_auratus
ENSPPRG00000003941	-	98	53.646	ENSMOCG00000021576	Apobec3	81	55.172	Microtus_ochrogaster
ENSPPRG00000003941	-	99	48.980	MGP_CAROLIEiJ_G0020029	Apobec3	98	48.980	Mus_caroli
ENSPPRG00000003941	-	99	51.020	ENSMUSG00000009585	Apobec3	100	50.000	Mus_musculus
ENSPPRG00000003941	-	99	51.000	MGP_PahariEiJ_G0020031	-	87	51.000	Mus_pahari
ENSPPRG00000003941	-	98	50.259	MGP_SPRETEiJ_G0020927	Apobec3	98	45.783	Mus_spretus
ENSPPRG00000003941	-	99	65.979	ENSMPUG00000013239	-	92	65.979	Mustela_putorius_furo
ENSPPRG00000003941	-	99	50.000	ENSNGAG00000018998	Apobec3	98	50.521	Nannospalax_galili
ENSPPRG00000003941	-	99	50.754	ENSNLEG00000015218	-	94	50.754	Nomascus_leucogenys
ENSPPRG00000003941	-	93	41.530	ENSOCUG00000023913	-	90	41.530	Oryctolagus_cuniculus
ENSPPRG00000003941	-	95	63.687	ENSOARG00000016290	APOBEC3F	97	63.687	Ovis_aries
ENSPPRG00000003941	-	93	50.543	ENSPPAG00000036522	APOBEC3H	98	51.381	Pan_paniscus
ENSPPRG00000003941	-	100	99.485	ENSPTIG00000010283	-	100	99.485	Panthera_tigris_altaica
ENSPPRG00000003941	-	93	50.543	ENSPTRG00000014390	APOBEC3H	98	51.381	Pan_troglodytes
ENSPPRG00000003941	-	99	51.515	ENSPANG00000010774	APOBEC3H	94	51.515	Papio_anubis
ENSPPRG00000003941	-	99	51.777	ENSPEMG00000000456	Apobec3	82	51.777	Peromyscus_maniculatus_bairdii
ENSPPRG00000003941	-	99	49.246	ENSPPYG00000011834	-	94	49.246	Pongo_abelii
ENSPPRG00000003941	-	89	47.674	ENSPCAG00000015655	-	96	47.674	Procavia_capensis
ENSPPRG00000003941	-	91	61.017	ENSPVAG00000009462	-	99	61.017	Pteropus_vampyrus
ENSPPRG00000003941	-	64	35.484	ENSPVAG00000024161	-	94	35.484	Pteropus_vampyrus
ENSPPRG00000003941	-	64	32.258	ENSPVAG00000024267	-	94	32.258	Pteropus_vampyrus
ENSPPRG00000003941	-	96	54.144	ENSRNOG00000016852	Apobec3	91	54.144	Rattus_norvegicus
ENSPPRG00000003941	-	99	50.251	ENSRBIG00000029088	APOBEC3H	94	50.251	Rhinopithecus_bieti
ENSPPRG00000003941	-	99	49.749	ENSRROG00000024699	APOBEC3H	94	49.749	Rhinopithecus_roxellana
ENSPPRG00000003941	-	91	52.198	ENSSBOG00000030005	APOBEC3H	100	52.482	Saimiri_boliviensis_boliviensis
ENSPPRG00000003941	-	99	58.462	ENSSSCG00000000091	APOBEC3B	80	58.462	Sus_scrofa
ENSPPRG00000003941	-	88	53.801	ENSTBEG00000001532	-	99	53.801	Tupaia_belangeri
ENSPPRG00000003941	-	92	60.335	ENSTTRG00000001266	-	100	60.335	Tursiops_truncatus
ENSPPRG00000003941	-	94	62.105	ENSUAMG00000004427	-	86	62.105	Ursus_americanus
ENSPPRG00000003941	-	99	66.495	ENSUMAG00000014435	-	99	66.495	Ursus_maritimus
ENSPPRG00000003941	-	65	58.268	ENSVPAG00000011108	-	99	58.268	Vicugna_pacos
ENSPPRG00000003941	-	96	71.739	ENSVVUG00000014624	-	60	71.739	Vulpes_vulpes