EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000004157 (Gene tree)
Gene ID: 109249256
Gene Symbol: -
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 2278 bases
Position: chrKV860349.1:10509236-10511513
Accession: 109249256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000009828	zf-U11-48K	PF05253.12	4.8e-20	1	2
ENSPPRP00000009828	zf-U11-48K	PF05253.12	4.8e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000007724	-	387	XM_019419631	ENSPPRP00000009828	128 (aa)	XP_019275176	-

Gene Model

Click here to download ENSPPRG00000004157's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000004157's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000004157	-	68	63.636	ENSPPRG00000023086	GTSF1L	88	63.636
ENSPPRG00000004157	-	84	32.110	ENSPPRG00000004344	-	65	32.110

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000004157	-	99	94.488	ENSAMEG00000000958	-	83	94.488	Ailuropoda_melanoleuca
ENSPPRG00000004157	-	99	90.551	ENSCAFG00000006463	-	82	90.551	Canis_familiaris
ENSPPRG00000004157	-	99	90.551	ENSCAFG00020020371	-	80	90.551	Canis_lupus_dingo
ENSPPRG00000004157	-	99	75.591	ENSCPOG00000023851	-	84	75.591	Cavia_porcellus
ENSPPRG00000004157	-	99	75.591	ENSCLAG00000008579	-	86	75.591	Chinchilla_lanigera
ENSPPRG00000004157	-	99	74.016	ENSCGRG00001016136	Gtsf2	82	74.016	Cricetulus_griseus_chok1gshd
ENSPPRG00000004157	-	99	74.016	ENSCGRG00000012950	Gtsf2	82	74.016	Cricetulus_griseus_crigri
ENSPPRG00000004157	-	99	84.252	ENSDORG00000026087	Gtsf2	83	84.252	Dipodomys_ordii
ENSPPRG00000004157	-	83	76.636	ENSEASG00005010262	-	98	76.636	Equus_asinus_asinus
ENSPPRG00000004157	-	83	85.849	ENSECAG00000014413	-	98	85.849	Equus_caballus
ENSPPRG00000004157	-	83	98.113	ENSFCAG00000031316	-	91	98.113	Felis_catus
ENSPPRG00000004157	-	99	77.165	ENSFDAG00000019555	-	85	77.165	Fukomys_damarensis
ENSPPRG00000004157	-	99	77.953	ENSHGLG00000002798	-	82	77.953	Heterocephalus_glaber_female
ENSPPRG00000004157	-	99	77.953	ENSHGLG00100012359	-	82	77.953	Heterocephalus_glaber_male
ENSPPRG00000004157	-	99	79.528	ENSSTOG00000030158	-	85	79.528	Ictidomys_tridecemlineatus
ENSPPRG00000004157	-	99	77.165	ENSJJAG00000016320	Gtsf2	82	77.165	Jaculus_jaculus
ENSPPRG00000004157	-	62	79.747	ENSMAUG00000014687	-	87	79.747	Mesocricetus_auratus
ENSPPRG00000004157	-	99	78.740	ENSMAUG00000017189	-	78	78.740	Mesocricetus_auratus
ENSPPRG00000004157	-	99	77.953	ENSMOCG00000014770	Gtsf2	83	77.953	Microtus_ochrogaster
ENSPPRG00000004157	-	99	73.228	MGP_CAROLIEiJ_G0020380	Gtsf2	82	73.228	Mus_caroli
ENSPPRG00000004157	-	99	74.016	ENSMUSG00000053508	Gtsf2	82	74.016	Mus_musculus
ENSPPRG00000004157	-	99	75.591	MGP_PahariEiJ_G0020379	Gtsf2	82	75.591	Mus_pahari
ENSPPRG00000004157	-	99	74.016	MGP_SPRETEiJ_G0021273	Gtsf2	82	74.016	Mus_spretus
ENSPPRG00000004157	-	99	94.488	ENSMPUG00000005664	-	82	94.488	Mustela_putorius_furo
ENSPPRG00000004157	-	52	74.242	ENSMLUG00000024563	-	100	74.242	Myotis_lucifugus
ENSPPRG00000004157	-	99	68.504	ENSNGAG00000008752	Gtsf2	82	68.504	Nannospalax_galili
ENSPPRG00000004157	-	99	73.228	ENSODEG00000013228	-	85	73.228	Octodon_degus
ENSPPRG00000004157	-	100	100.000	ENSPTIG00000020670	-	100	100.000	Panthera_tigris_altaica
ENSPPRG00000004157	-	99	74.803	ENSPEMG00000014641	-	94	74.528	Peromyscus_maniculatus_bairdii
ENSPPRG00000004157	-	99	78.740	ENSPEMG00000010828	-	82	78.740	Peromyscus_maniculatus_bairdii
ENSPPRG00000004157	-	99	74.803	ENSRNOG00000036830	RGD1563200	82	74.803	Rattus_norvegicus
ENSPPRG00000004157	-	82	81.905	ENSSSCG00000000296	-	69	81.905	Sus_scrofa
ENSPPRG00000004157	-	83	94.340	ENSUAMG00000021668	-	97	94.340	Ursus_americanus
ENSPPRG00000004157	-	83	94.340	ENSUMAG00000011281	-	97	94.340	Ursus_maritimus
ENSPPRG00000004157	-	83	89.623	ENSVVUG00000023684	-	97	89.623	Vulpes_vulpes