EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000004283 (Gene tree)
Gene ID: 109249422
Gene Symbol: SNRNP48
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 21026 bases
Position: chrKV860351.1:1513680-1534705
Accession: 109249422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000010013	zf-U11-48K	PF05253.12	1.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000007927	SNRNP48-201	2323	XM_019419795	ENSPPRP00000010013	339 (aa)	XP_019275340	UPI000904AEF9

Gene Model

Click here to download ENSPPRG00000004283's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000004283's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000004283	SNRNP48	100	93.805	ENSG00000168566	SNRNP48	100	93.805	Homo_sapiens
ENSPPRG00000004283	SNRNP48	81	47.887	ENSAPOG00000021430	snrnp48	83	47.586	Acanthochromis_polyacanthus
ENSPPRG00000004283	SNRNP48	99	92.795	ENSAMEG00000017349	SNRNP48	100	92.795	Ailuropoda_melanoleuca
ENSPPRG00000004283	SNRNP48	83	47.018	ENSACIG00000002032	snrnp48	82	47.018	Amphilophus_citrinellus
ENSPPRG00000004283	SNRNP48	81	47.203	ENSAOCG00000010562	snrnp48	83	46.918	Amphiprion_ocellaris
ENSPPRG00000004283	SNRNP48	81	47.872	ENSAPEG00000003231	snrnp48	83	47.569	Amphiprion_percula
ENSPPRG00000004283	SNRNP48	77	49.265	ENSATEG00000020210	snrnp48	81	48.929	Anabas_testudineus
ENSPPRG00000004283	SNRNP48	83	64.726	ENSACAG00000002811	SNRNP48	90	64.726	Anolis_carolinensis
ENSPPRG00000004283	SNRNP48	100	93.510	ENSANAG00000033538	SNRNP48	100	93.510	Aotus_nancymaae
ENSPPRG00000004283	SNRNP48	94	44.923	ENSAMXG00000015309	snrnp48	85	47.222	Astyanax_mexicanus
ENSPPRG00000004283	SNRNP48	100	89.118	ENSBTAG00000001123	SNRNP48	100	89.412	Bos_taurus
ENSPPRG00000004283	SNRNP48	100	93.805	ENSCJAG00000021330	SNRNP48	100	93.805	Callithrix_jacchus
ENSPPRG00000004283	SNRNP48	99	95.238	ENSCAFG00000009574	SNRNP48	83	95.252	Canis_familiaris
ENSPPRG00000004283	SNRNP48	99	95.549	ENSCAFG00020013203	SNRNP48	99	95.549	Canis_lupus_dingo
ENSPPRG00000004283	SNRNP48	100	90.588	ENSCHIG00000015216	SNRNP48	100	90.882	Capra_hircus
ENSPPRG00000004283	SNRNP48	100	91.150	ENSTSYG00000000698	SNRNP48	100	91.150	Carlito_syrichta
ENSPPRG00000004283	SNRNP48	91	85.390	ENSCAPG00000006768	SNRNP48	100	85.390	Cavia_aperea
ENSPPRG00000004283	SNRNP48	100	88.791	ENSCPOG00000007910	SNRNP48	100	88.791	Cavia_porcellus
ENSPPRG00000004283	SNRNP48	100	92.330	ENSCCAG00000035652	SNRNP48	100	92.330	Cebus_capucinus
ENSPPRG00000004283	SNRNP48	100	93.215	ENSCATG00000033947	SNRNP48	100	93.215	Cercocebus_atys
ENSPPRG00000004283	SNRNP48	100	88.791	ENSCLAG00000003765	SNRNP48	100	88.791	Chinchilla_lanigera
ENSPPRG00000004283	SNRNP48	100	93.805	ENSCSAG00000007409	SNRNP48	100	93.805	Chlorocebus_sabaeus
ENSPPRG00000004283	SNRNP48	85	65.461	ENSCPBG00000019146	SNRNP48	92	65.461	Chrysemys_picta_bellii
ENSPPRG00000004283	SNRNP48	94	31.118	ENSCING00000004121	-	97	30.952	Ciona_intestinalis
ENSPPRG00000004283	SNRNP48	100	93.805	ENSCANG00000030017	SNRNP48	100	93.805	Colobus_angolensis_palliatus
ENSPPRG00000004283	SNRNP48	99	69.254	ENSCGRG00001008805	-	95	68.657	Cricetulus_griseus_chok1gshd
ENSPPRG00000004283	SNRNP48	100	88.201	ENSCGRG00001001076	-	100	87.906	Cricetulus_griseus_chok1gshd
ENSPPRG00000004283	SNRNP48	100	88.201	ENSCGRG00000007781	Snrnp48	100	87.906	Cricetulus_griseus_crigri
ENSPPRG00000004283	SNRNP48	78	47.191	ENSCSEG00000000722	snrnp48	78	46.127	Cynoglossus_semilaevis
ENSPPRG00000004283	SNRNP48	89	44.728	ENSCVAG00000019829	snrnp48	65	47.876	Cyprinodon_variegatus
ENSPPRG00000004283	SNRNP48	81	45.775	ENSDARG00000039989	snrnp48	83	45.517	Danio_rerio
ENSPPRG00000004283	SNRNP48	100	91.765	ENSDNOG00000014978	SNRNP48	100	91.765	Dasypus_novemcinctus
ENSPPRG00000004283	SNRNP48	99	88.201	ENSDORG00000015140	Snrnp48	100	87.941	Dipodomys_ordii
ENSPPRG00000004283	SNRNP48	99	94.970	ENSEASG00005012021	SNRNP48	100	94.690	Equus_asinus_asinus
ENSPPRG00000004283	SNRNP48	100	95.575	ENSECAG00000026937	SNRNP48	100	95.575	Equus_caballus
ENSPPRG00000004283	SNRNP48	100	70.588	ENSEEUG00000015437	SNRNP48	99	70.294	Erinaceus_europaeus
ENSPPRG00000004283	SNRNP48	85	47.138	ENSELUG00000009766	snrnp48	75	48.364	Esox_lucius
ENSPPRG00000004283	SNRNP48	100	99.410	ENSFCAG00000018853	SNRNP48	100	99.410	Felis_catus
ENSPPRG00000004283	SNRNP48	83	65.411	ENSFALG00000007797	SNRNP48	93	65.411	Ficedula_albicollis
ENSPPRG00000004283	SNRNP48	99	89.053	ENSFDAG00000009231	SNRNP48	100	88.791	Fukomys_damarensis
ENSPPRG00000004283	SNRNP48	59	54.455	ENSFHEG00000014647	snrnp48	97	44.781	Fundulus_heteroclitus
ENSPPRG00000004283	SNRNP48	73	48.193	ENSGMOG00000018599	-	81	47.761	Gadus_morhua
ENSPPRG00000004283	SNRNP48	82	63.668	ENSGALG00000013005	SNRNP48	85	66.798	Gallus_gallus
ENSPPRG00000004283	SNRNP48	73	49.609	ENSGAFG00000021639	snrnp48	81	42.900	Gambusia_affinis
ENSPPRG00000004283	SNRNP48	71	51.029	ENSGACG00000017756	-	84	48.264	Gasterosteus_aculeatus
ENSPPRG00000004283	SNRNP48	83	65.436	ENSGAGG00000000865	SNRNP48	97	64.570	Gopherus_agassizii
ENSPPRG00000004283	SNRNP48	100	93.805	ENSGGOG00000013220	SNRNP48	100	93.805	Gorilla_gorilla
ENSPPRG00000004283	SNRNP48	98	42.151	ENSHBUG00000017066	snrnp48	95	40.456	Haplochromis_burtoni
ENSPPRG00000004283	SNRNP48	99	89.941	ENSHGLG00000015241	SNRNP48	100	89.676	Heterocephalus_glaber_female
ENSPPRG00000004283	SNRNP48	99	89.941	ENSHGLG00100010027	SNRNP48	100	89.676	Heterocephalus_glaber_male
ENSPPRG00000004283	SNRNP48	72	46.748	ENSHCOG00000014066	snrnp48	81	44.792	Hippocampus_comes
ENSPPRG00000004283	SNRNP48	100	93.510	ENSSTOG00000014635	SNRNP48	100	93.510	Ictidomys_tridecemlineatus
ENSPPRG00000004283	SNRNP48	100	85.251	ENSJJAG00000011495	Snrnp48	100	85.251	Jaculus_jaculus
ENSPPRG00000004283	SNRNP48	88	44.702	ENSKMAG00000016514	snrnp48	79	47.101	Kryptolebias_marmoratus
ENSPPRG00000004283	SNRNP48	74	49.421	ENSLBEG00000026249	snrnp48	93	43.068	Labrus_bergylta
ENSPPRG00000004283	SNRNP48	95	54.268	ENSLACG00000003958	SNRNP48	95	54.268	Latimeria_chalumnae
ENSPPRG00000004283	SNRNP48	83	50.865	ENSLOCG00000004187	snrnp48	92	49.390	Lepisosteus_oculatus
ENSPPRG00000004283	SNRNP48	100	88.791	ENSLAFG00000011152	SNRNP48	100	88.791	Loxodonta_africana
ENSPPRG00000004283	SNRNP48	100	94.100	ENSMFAG00000045216	SNRNP48	100	94.100	Macaca_fascicularis
ENSPPRG00000004283	SNRNP48	100	94.100	ENSMMUG00000014785	SNRNP48	100	94.100	Macaca_mulatta
ENSPPRG00000004283	SNRNP48	100	93.805	ENSMNEG00000042269	SNRNP48	100	93.805	Macaca_nemestrina
ENSPPRG00000004283	SNRNP48	100	94.100	ENSMLEG00000034004	SNRNP48	100	94.100	Mandrillus_leucophaeus
ENSPPRG00000004283	SNRNP48	75	48.462	ENSMAMG00000018673	snrnp48	71	47.368	Mastacembelus_armatus
ENSPPRG00000004283	SNRNP48	83	65.306	ENSMGAG00000006037	SNRNP48	99	64.726	Meleagris_gallopavo
ENSPPRG00000004283	SNRNP48	100	88.791	ENSMAUG00000011944	Snrnp48	100	88.496	Mesocricetus_auratus
ENSPPRG00000004283	SNRNP48	100	90.855	ENSMICG00000012497	SNRNP48	100	90.855	Microcebus_murinus
ENSPPRG00000004283	SNRNP48	100	88.201	ENSMOCG00000015555	Snrnp48	100	87.906	Microtus_ochrogaster
ENSPPRG00000004283	SNRNP48	54	52.688	ENSMMOG00000003072	-	58	52.688	Mola_mola
ENSPPRG00000004283	SNRNP48	98	71.884	ENSMODG00000009996	SNRNP48	93	71.884	Monodelphis_domestica
ENSPPRG00000004283	SNRNP48	73	51.600	ENSMALG00000005725	snrnp48	79	49.097	Monopterus_albus
ENSPPRG00000004283	SNRNP48	100	87.316	MGP_CAROLIEiJ_G0018441	Snrnp48	100	87.316	Mus_caroli
ENSPPRG00000004283	SNRNP48	100	87.021	ENSMUSG00000021431	Snrnp48	100	87.021	Mus_musculus
ENSPPRG00000004283	SNRNP48	100	86.726	MGP_PahariEiJ_G0019509	Snrnp48	100	86.726	Mus_pahari
ENSPPRG00000004283	SNRNP48	100	86.431	MGP_SPRETEiJ_G0019321	Snrnp48	100	86.431	Mus_spretus
ENSPPRG00000004283	SNRNP48	99	86.686	ENSNGAG00000004849	Snrnp48	99	86.686	Nannospalax_galili
ENSPPRG00000004283	SNRNP48	76	46.565	ENSNBRG00000012127	snrnp48	82	45.172	Neolamprologus_brichardi
ENSPPRG00000004283	SNRNP48	100	94.100	ENSNLEG00000011667	SNRNP48	100	94.100	Nomascus_leucogenys
ENSPPRG00000004283	SNRNP48	95	77.709	ENSOPRG00000015471	SNRNP48	100	77.709	Ochotona_princeps
ENSPPRG00000004283	SNRNP48	76	48.276	ENSONIG00000001520	snrnp48	82	45.517	Oreochromis_niloticus
ENSPPRG00000004283	SNRNP48	57	63.942	ENSOANG00000019888	-	100	64.904	Ornithorhynchus_anatinus
ENSPPRG00000004283	SNRNP48	84	89.510	ENSOCUG00000005168	SNRNP48	100	88.816	Oryctolagus_cuniculus
ENSPPRG00000004283	SNRNP48	88	45.779	ENSORLG00000015654	snrnp48	82	46.897	Oryzias_latipes
ENSPPRG00000004283	SNRNP48	88	45.130	ENSORLG00020015976	snrnp48	70	46.207	Oryzias_latipes_hni
ENSPPRG00000004283	SNRNP48	88	46.104	ENSORLG00015022379	snrnp48	71	47.241	Oryzias_latipes_hsok
ENSPPRG00000004283	SNRNP48	83	46.528	ENSOMEG00000022007	snrnp48	82	47.222	Oryzias_melastigma
ENSPPRG00000004283	SNRNP48	92	91.318	ENSOGAG00000005275	SNRNP48	96	91.483	Otolemur_garnettii
ENSPPRG00000004283	SNRNP48	85	90.244	ENSOARG00000017319	SNRNP48	100	90.244	Ovis_aries
ENSPPRG00000004283	SNRNP48	100	94.100	ENSPPAG00000032873	SNRNP48	100	94.100	Pan_paniscus
ENSPPRG00000004283	SNRNP48	85	100.000	ENSPTIG00000013502	SNRNP48	100	100.000	Panthera_tigris_altaica
ENSPPRG00000004283	SNRNP48	100	94.100	ENSPTRG00000017703	SNRNP48	100	94.100	Pan_troglodytes
ENSPPRG00000004283	SNRNP48	100	94.100	ENSPANG00000000771	SNRNP48	100	94.100	Papio_anubis
ENSPPRG00000004283	SNRNP48	94	46.087	ENSPKIG00000013703	snrnp48	59	50.526	Paramormyrops_kingsleyae
ENSPPRG00000004283	SNRNP48	88	62.658	ENSPSIG00000002213	SNRNP48	97	62.658	Pelodiscus_sinensis
ENSPPRG00000004283	SNRNP48	72	48.387	ENSPMGG00000008120	snrnp48	86	48.387	Periophthalmus_magnuspinnatus
ENSPPRG00000004283	SNRNP48	100	88.791	ENSPEMG00000008872	Snrnp48	100	88.496	Peromyscus_maniculatus_bairdii
ENSPPRG00000004283	SNRNP48	73	50.996	ENSPFOG00000003578	snrnp48	81	44.172	Poecilia_formosa
ENSPPRG00000004283	SNRNP48	67	50.218	ENSPLAG00000002290	snrnp48	77	50.218	Poecilia_latipinna
ENSPPRG00000004283	SNRNP48	73	50.199	ENSPMEG00000018033	snrnp48	81	43.558	Poecilia_mexicana
ENSPPRG00000004283	SNRNP48	72	50.407	ENSPREG00000018541	snrnp48	80	47.872	Poecilia_reticulata
ENSPPRG00000004283	SNRNP48	100	92.625	ENSPPYG00000016209	SNRNP48	100	92.625	Pongo_abelii
ENSPPRG00000004283	SNRNP48	79	69.663	ENSPCAG00000011991	SNRNP48	99	69.663	Procavia_capensis
ENSPPRG00000004283	SNRNP48	100	92.330	ENSPVAG00000002854	SNRNP48	100	92.330	Pteropus_vampyrus
ENSPPRG00000004283	SNRNP48	76	47.328	ENSPNYG00000015399	snrnp48	92	45.424	Pundamilia_nyererei
ENSPPRG00000004283	SNRNP48	100	88.201	ENSRNOG00000013756	Snrnp48	100	88.201	Rattus_norvegicus
ENSPPRG00000004283	SNRNP48	91	93.548	ENSRBIG00000043856	SNRNP48	97	94.079	Rhinopithecus_bieti
ENSPPRG00000004283	SNRNP48	100	93.805	ENSRROG00000043229	SNRNP48	100	93.805	Rhinopithecus_roxellana
ENSPPRG00000004283	SNRNP48	100	93.510	ENSSBOG00000019486	SNRNP48	100	93.510	Saimiri_boliviensis_boliviensis
ENSPPRG00000004283	SNRNP48	98	71.802	ENSSHAG00000014483	SNRNP48	99	71.802	Sarcophilus_harrisii
ENSPPRG00000004283	SNRNP48	73	50.598	ENSSFOG00015006610	snrnp48	68	48.611	Scleropages_formosus
ENSPPRG00000004283	SNRNP48	79	48.727	ENSSDUG00000014953	snrnp48	79	48.364	Seriola_dumerili
ENSPPRG00000004283	SNRNP48	79	49.104	ENSSLDG00000005989	snrnp48	79	49.104	Seriola_lalandi_dorsalis
ENSPPRG00000004283	SNRNP48	98	59.249	ENSSPUG00000006257	SNRNP48	85	64.765	Sphenodon_punctatus
ENSPPRG00000004283	SNRNP48	78	48.727	ENSSPAG00000006454	snrnp48	80	48.399	Stegastes_partitus
ENSPPRG00000004283	SNRNP48	83	64.605	ENSTGUG00000007575	SNRNP48	93	64.014	Taeniopygia_guttata
ENSPPRG00000004283	SNRNP48	73	49.801	ENSTRUG00000007031	snrnp48	79	49.084	Takifugu_rubripes
ENSPPRG00000004283	SNRNP48	71	47.107	ENSTNIG00000012977	-	72	46.914	Tetraodon_nigroviridis
ENSPPRG00000004283	SNRNP48	100	74.041	ENSTBEG00000015620	SNRNP48	100	74.041	Tupaia_belangeri
ENSPPRG00000004283	SNRNP48	100	92.625	ENSTTRG00000016715	SNRNP48	100	92.625	Tursiops_truncatus
ENSPPRG00000004283	SNRNP48	100	95.870	ENSUAMG00000003690	SNRNP48	100	95.870	Ursus_americanus
ENSPPRG00000004283	SNRNP48	85	89.895	ENSVPAG00000003557	SNRNP48	100	89.895	Vicugna_pacos
ENSPPRG00000004283	SNRNP48	99	95.252	ENSVVUG00000004996	SNRNP48	99	95.252	Vulpes_vulpes
ENSPPRG00000004283	SNRNP48	89	51.592	ENSXETG00000020447	snrnp48	99	49.153	Xenopus_tropicalis
ENSPPRG00000004283	SNRNP48	67	50.000	ENSXCOG00000004478	snrnp48	69	49.565	Xiphophorus_couchianus
ENSPPRG00000004283	SNRNP48	82	48.746	ENSXMAG00000013595	snrnp48	81	43.865	Xiphophorus_maculatus