EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000004391 (Gene tree)
Gene ID: 109253584
Gene Symbol: SF3A1
Alias: -
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 21359 bases
Position: chrKV860378.1:5153866-5175224
Accession: 109253584
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000010147	PRP21_like_P	PF12230.8	1e-51	1	1
ENSPPRP00000010147	Surp	PF01805.20	6.9e-46	1	2
ENSPPRP00000010147	Surp	PF01805.20	6.9e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000008067	SF3A1-201	2884	XM_019426658	ENSPPRP00000010147	793 (aa)	XP_019282203	UPI000298C78C

Gene Model

Click here to download ENSPPRG00000004391's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000004391's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000004391	SF3A1	100	98.613	ENSG00000099995	SF3A1	100	98.613	Homo_sapiens
ENSPPRG00000004391	SF3A1	100	83.396	ENSAPOG00000020465	sf3a1	99	84.783	Acanthochromis_polyacanthus
ENSPPRG00000004391	SF3A1	100	99.119	ENSAMEG00000007737	SF3A1	100	99.119	Ailuropoda_melanoleuca
ENSPPRG00000004391	SF3A1	100	84.151	ENSACIG00000020672	sf3a1	99	84.783	Amphilophus_citrinellus
ENSPPRG00000004391	SF3A1	100	83.125	ENSAOCG00000003060	sf3a1	99	84.783	Amphiprion_ocellaris
ENSPPRG00000004391	SF3A1	100	83.250	ENSAPEG00000010735	sf3a1	99	84.910	Amphiprion_percula
ENSPPRG00000004391	SF3A1	96	85.807	ENSATEG00000021201	sf3a1	98	85.090	Anabas_testudineus
ENSPPRG00000004391	SF3A1	95	94.320	ENSAPLG00000009057	SF3A1	99	93.419	Anas_platyrhynchos
ENSPPRG00000004391	SF3A1	100	85.837	ENSACAG00000009415	SF3A1	100	87.192	Anolis_carolinensis
ENSPPRG00000004391	SF3A1	100	98.991	ENSANAG00000032045	SF3A1	100	98.991	Aotus_nancymaae
ENSPPRG00000004391	SF3A1	100	84.230	ENSACLG00000012622	sf3a1	99	85.275	Astatotilapia_calliptera
ENSPPRG00000004391	SF3A1	99	83.439	ENSAMXG00000005382	sf3a1	99	84.299	Astyanax_mexicanus
ENSPPRG00000004391	SF3A1	100	99.496	ENSBTAG00000003390	SF3A1	100	99.496	Bos_taurus
ENSPPRG00000004391	SF3A1	84	43.268	WBGene00004188	prp-21	90	44.677	Caenorhabditis_elegans
ENSPPRG00000004391	SF3A1	100	99.117	ENSCJAG00000010370	SF3A1	100	99.117	Callithrix_jacchus
ENSPPRG00000004391	SF3A1	100	99.748	ENSCAFG00000012559	SF3A1	100	99.748	Canis_familiaris
ENSPPRG00000004391	SF3A1	100	99.748	ENSCAFG00020000838	SF3A1	100	99.748	Canis_lupus_dingo
ENSPPRG00000004391	SF3A1	100	99.369	ENSCHIG00000018642	SF3A1	100	99.369	Capra_hircus
ENSPPRG00000004391	SF3A1	100	99.117	ENSTSYG00000004739	SF3A1	100	99.117	Carlito_syrichta
ENSPPRG00000004391	SF3A1	94	81.308	ENSCAPG00000015414	SF3A1	98	81.308	Cavia_aperea
ENSPPRG00000004391	SF3A1	100	98.991	ENSCPOG00000014589	SF3A1	100	98.991	Cavia_porcellus
ENSPPRG00000004391	SF3A1	100	98.991	ENSCCAG00000032006	SF3A1	100	98.991	Cebus_capucinus
ENSPPRG00000004391	SF3A1	100	98.991	ENSCATG00000029241	SF3A1	100	98.991	Cercocebus_atys
ENSPPRG00000004391	SF3A1	100	98.361	ENSCLAG00000006508	SF3A1	100	98.361	Chinchilla_lanigera
ENSPPRG00000004391	SF3A1	100	98.865	ENSCSAG00000009470	SF3A1	100	98.865	Chlorocebus_sabaeus
ENSPPRG00000004391	SF3A1	61	99.262	ENSCHOG00000005201	SF3A1	69	99.262	Choloepus_hoffmanni
ENSPPRG00000004391	SF3A1	100	91.184	ENSCPBG00000007595	SF3A1	100	91.310	Chrysemys_picta_bellii
ENSPPRG00000004391	SF3A1	94	52.116	ENSCING00000008526	-	66	58.046	Ciona_intestinalis
ENSPPRG00000004391	SF3A1	96	51.484	ENSCSAVG00000005608	-	92	61.864	Ciona_savignyi
ENSPPRG00000004391	SF3A1	100	98.865	ENSCANG00000033564	SF3A1	100	98.865	Colobus_angolensis_palliatus
ENSPPRG00000004391	SF3A1	100	98.361	ENSCGRG00001008933	Sf3a1	100	98.361	Cricetulus_griseus_chok1gshd
ENSPPRG00000004391	SF3A1	100	98.361	ENSCGRG00000006127	Sf3a1	100	98.361	Cricetulus_griseus_crigri
ENSPPRG00000004391	SF3A1	99	81.853	ENSCSEG00000010792	sf3a1	99	81.923	Cynoglossus_semilaevis
ENSPPRG00000004391	SF3A1	100	82.767	ENSCVAG00000004560	sf3a1	98	83.984	Cyprinodon_variegatus
ENSPPRG00000004391	SF3A1	100	82.412	ENSDARG00000041887	sf3a1	97	84.746	Danio_rerio
ENSPPRG00000004391	SF3A1	100	98.868	ENSDNOG00000010629	SF3A1	100	98.868	Dasypus_novemcinctus
ENSPPRG00000004391	SF3A1	100	99.243	ENSDORG00000005613	Sf3a1	100	99.243	Dipodomys_ordii
ENSPPRG00000004391	SF3A1	79	61.495	FBgn0266917	Sf3a1	85	59.279	Drosophila_melanogaster
ENSPPRG00000004391	SF3A1	89	95.869	ENSETEG00000017194	SF3A1	100	95.869	Echinops_telfairi
ENSPPRG00000004391	SF3A1	100	65.059	ENSEBUG00000001285	sf3a1	96	67.284	Eptatretus_burgeri
ENSPPRG00000004391	SF3A1	100	99.369	ENSEASG00005010254	SF3A1	100	99.369	Equus_asinus_asinus
ENSPPRG00000004391	SF3A1	100	99.369	ENSECAG00000023962	SF3A1	100	99.369	Equus_caballus
ENSPPRG00000004391	SF3A1	73	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSPPRG00000004391	SF3A1	100	82.456	ENSELUG00000022578	sf3a1	98	82.971	Esox_lucius
ENSPPRG00000004391	SF3A1	100	100.000	ENSFCAG00000011932	SF3A1	100	100.000	Felis_catus
ENSPPRG00000004391	SF3A1	95	93.254	ENSFALG00000006944	SF3A1	100	91.940	Ficedula_albicollis
ENSPPRG00000004391	SF3A1	100	98.865	ENSFDAG00000009560	SF3A1	100	98.865	Fukomys_damarensis
ENSPPRG00000004391	SF3A1	100	83.899	ENSFHEG00000010866	sf3a1	98	85.156	Fundulus_heteroclitus
ENSPPRG00000004391	SF3A1	100	81.108	ENSGMOG00000016024	sf3a1	99	80.485	Gadus_morhua
ENSPPRG00000004391	SF3A1	95	94.312	ENSGALG00000007937	SF3A1	100	92.569	Gallus_gallus
ENSPPRG00000004391	SF3A1	100	82.893	ENSGAFG00000009111	sf3a1	97	84.575	Gambusia_affinis
ENSPPRG00000004391	SF3A1	100	82.242	ENSGACG00000011893	sf3a1	97	83.377	Gasterosteus_aculeatus
ENSPPRG00000004391	SF3A1	96	91.327	ENSGAGG00000000762	SF3A1	99	91.459	Gopherus_agassizii
ENSPPRG00000004391	SF3A1	100	98.613	ENSGGOG00000012631	SF3A1	100	98.613	Gorilla_gorilla
ENSPPRG00000004391	SF3A1	100	84.230	ENSHBUG00000015795	sf3a1	99	85.275	Haplochromis_burtoni
ENSPPRG00000004391	SF3A1	100	99.117	ENSHGLG00000007907	SF3A1	100	99.117	Heterocephalus_glaber_female
ENSPPRG00000004391	SF3A1	100	99.117	ENSHGLG00100013799	SF3A1	100	99.117	Heterocephalus_glaber_male
ENSPPRG00000004391	SF3A1	100	80.252	ENSHCOG00000015423	sf3a1	99	80.645	Hippocampus_comes
ENSPPRG00000004391	SF3A1	96	82.552	ENSIPUG00000002470	sf3a1	98	82.812	Ictalurus_punctatus
ENSPPRG00000004391	SF3A1	100	99.369	ENSSTOG00000013892	SF3A1	100	99.369	Ictidomys_tridecemlineatus
ENSPPRG00000004391	SF3A1	100	98.992	ENSJJAG00000022566	Sf3a1	100	98.992	Jaculus_jaculus
ENSPPRG00000004391	SF3A1	100	82.642	ENSKMAG00000002400	sf3a1	98	84.635	Kryptolebias_marmoratus
ENSPPRG00000004391	SF3A1	100	82.264	ENSLBEG00000022974	sf3a1	99	82.839	Labrus_bergylta
ENSPPRG00000004391	SF3A1	100	87.077	ENSLACG00000003565	SF3A1	97	88.281	Latimeria_chalumnae
ENSPPRG00000004391	SF3A1	100	85.213	ENSLOCG00000008251	sf3a1	97	87.013	Lepisosteus_oculatus
ENSPPRG00000004391	SF3A1	100	98.613	ENSLAFG00000000448	SF3A1	100	98.613	Loxodonta_africana
ENSPPRG00000004391	SF3A1	98	61.911	ENSLAFG00000026032	-	98	62.038	Loxodonta_africana
ENSPPRG00000004391	SF3A1	100	98.739	ENSMFAG00000031979	SF3A1	100	98.739	Macaca_fascicularis
ENSPPRG00000004391	SF3A1	100	98.739	ENSMMUG00000005547	SF3A1	100	98.739	Macaca_mulatta
ENSPPRG00000004391	SF3A1	100	98.613	ENSMNEG00000037229	SF3A1	100	98.613	Macaca_nemestrina
ENSPPRG00000004391	SF3A1	100	98.865	ENSMLEG00000041908	SF3A1	100	98.865	Mandrillus_leucophaeus
ENSPPRG00000004391	SF3A1	97	85.640	ENSMAMG00000006460	sf3a1	97	85.770	Mastacembelus_armatus
ENSPPRG00000004391	SF3A1	100	84.230	ENSMZEG00005009633	sf3a1	99	85.275	Maylandia_zebra
ENSPPRG00000004391	SF3A1	95	94.312	ENSMGAG00000001330	SF3A1	99	93.411	Meleagris_gallopavo
ENSPPRG00000004391	SF3A1	92	94.945	ENSMAUG00000020317	Sf3a1	94	94.945	Mesocricetus_auratus
ENSPPRG00000004391	SF3A1	100	98.739	ENSMICG00000010038	SF3A1	100	98.739	Microcebus_murinus
ENSPPRG00000004391	SF3A1	100	98.487	ENSMOCG00000008438	Sf3a1	100	98.487	Microtus_ochrogaster
ENSPPRG00000004391	SF3A1	100	81.635	ENSMMOG00000015588	sf3a1	98	82.111	Mola_mola
ENSPPRG00000004391	SF3A1	100	97.982	ENSMODG00000009270	SF3A1	100	97.982	Monodelphis_domestica
ENSPPRG00000004391	SF3A1	100	84.383	ENSMALG00000000148	sf3a1	99	85.967	Monopterus_albus
ENSPPRG00000004391	SF3A1	100	97.982	MGP_CAROLIEiJ_G0016029	Sf3a1	100	97.982	Mus_caroli
ENSPPRG00000004391	SF3A1	100	97.982	ENSMUSG00000002129	Sf3a1	100	97.982	Mus_musculus
ENSPPRG00000004391	SF3A1	100	97.856	MGP_PahariEiJ_G0016862	Sf3a1	100	97.856	Mus_pahari
ENSPPRG00000004391	SF3A1	100	97.982	MGP_SPRETEiJ_G0016870	Sf3a1	100	97.982	Mus_spretus
ENSPPRG00000004391	SF3A1	100	99.496	ENSMPUG00000013144	SF3A1	100	99.496	Mustela_putorius_furo
ENSPPRG00000004391	SF3A1	100	99.369	ENSMLUG00000002139	SF3A1	100	99.369	Myotis_lucifugus
ENSPPRG00000004391	SF3A1	100	98.739	ENSNGAG00000016977	Sf3a1	100	98.739	Nannospalax_galili
ENSPPRG00000004391	SF3A1	100	83.645	ENSNBRG00000016642	sf3a1	96	86.693	Neolamprologus_brichardi
ENSPPRG00000004391	SF3A1	100	98.865	ENSNLEG00000003686	SF3A1	100	98.865	Nomascus_leucogenys
ENSPPRG00000004391	SF3A1	96	88.026	ENSMEUG00000008741	SF3A1	100	88.026	Notamacropus_eugenii
ENSPPRG00000004391	SF3A1	100	98.361	ENSOPRG00000016636	SF3A1	100	98.361	Ochotona_princeps
ENSPPRG00000004391	SF3A1	100	98.739	ENSODEG00000002571	SF3A1	100	98.739	Octodon_degus
ENSPPRG00000004391	SF3A1	100	83.980	ENSONIG00000010848	sf3a1	99	84.655	Oreochromis_niloticus
ENSPPRG00000004391	SF3A1	100	98.739	ENSOCUG00000007633	SF3A1	100	98.739	Oryctolagus_cuniculus
ENSPPRG00000004391	SF3A1	96	81.627	ENSORLG00000013050	sf3a1	99	83.178	Oryzias_latipes
ENSPPRG00000004391	SF3A1	99	80.000	ENSORLG00020003236	sf3a1	94	83.311	Oryzias_latipes_hni
ENSPPRG00000004391	SF3A1	100	82.138	ENSORLG00015017411	sf3a1	99	83.742	Oryzias_latipes_hsok
ENSPPRG00000004391	SF3A1	100	82.516	ENSOMEG00000013362	sf3a1	99	83.355	Oryzias_melastigma
ENSPPRG00000004391	SF3A1	100	98.613	ENSOGAG00000012931	SF3A1	100	98.613	Otolemur_garnettii
ENSPPRG00000004391	SF3A1	100	97.604	ENSOARG00000006849	SF3A1	100	97.604	Ovis_aries
ENSPPRG00000004391	SF3A1	100	97.604	ENSPPAG00000041790	SF3A1	100	97.604	Pan_paniscus
ENSPPRG00000004391	SF3A1	97	99.870	ENSPTIG00000000844	SF3A1	100	99.870	Panthera_tigris_altaica
ENSPPRG00000004391	SF3A1	100	98.613	ENSPTRG00000014240	SF3A1	100	98.613	Pan_troglodytes
ENSPPRG00000004391	SF3A1	100	98.865	ENSPANG00000020772	SF3A1	100	98.865	Papio_anubis
ENSPPRG00000004391	SF3A1	83	94.505	ENSPSIG00000012803	SF3A1	96	94.505	Pelodiscus_sinensis
ENSPPRG00000004391	SF3A1	96	84.162	ENSPMGG00000023096	sf3a1	100	84.162	Periophthalmus_magnuspinnatus
ENSPPRG00000004391	SF3A1	100	98.613	ENSPEMG00000009494	Sf3a1	100	98.613	Peromyscus_maniculatus_bairdii
ENSPPRG00000004391	SF3A1	69	78.040	ENSPMAG00000007139	-	90	77.757	Petromyzon_marinus
ENSPPRG00000004391	SF3A1	100	97.730	ENSPCIG00000022692	SF3A1	100	97.730	Phascolarctos_cinereus
ENSPPRG00000004391	SF3A1	100	75.000	ENSPFOG00000016768	sf3a1	93	78.639	Poecilia_formosa
ENSPPRG00000004391	SF3A1	100	83.291	ENSPLAG00000017268	sf3a1	97	84.837	Poecilia_latipinna
ENSPPRG00000004391	SF3A1	84	85.693	ENSPMEG00000019811	sf3a1	98	84.940	Poecilia_mexicana
ENSPPRG00000004391	SF3A1	100	83.417	ENSPREG00000010347	sf3a1	97	85.229	Poecilia_reticulata
ENSPPRG00000004391	SF3A1	100	98.865	ENSPPYG00000011707	SF3A1	100	98.865	Pongo_abelii
ENSPPRG00000004391	SF3A1	57	98.585	ENSPCAG00000003266	SF3A1	57	98.585	Procavia_capensis
ENSPPRG00000004391	SF3A1	100	98.991	ENSPCOG00000026630	SF3A1	100	98.991	Propithecus_coquereli
ENSPPRG00000004391	SF3A1	100	94.704	ENSPVAG00000017719	SF3A1	94	98.255	Pteropus_vampyrus
ENSPPRG00000004391	SF3A1	100	84.230	ENSPNYG00000018706	sf3a1	99	85.275	Pundamilia_nyererei
ENSPPRG00000004391	SF3A1	97	83.954	ENSPNAG00000003721	sf3a1	99	84.724	Pygocentrus_nattereri
ENSPPRG00000004391	SF3A1	100	98.235	ENSRNOG00000005218	Sf3a1	100	98.235	Rattus_norvegicus
ENSPPRG00000004391	SF3A1	100	98.865	ENSRBIG00000032167	SF3A1	100	98.865	Rhinopithecus_bieti
ENSPPRG00000004391	SF3A1	100	98.865	ENSRROG00000044908	SF3A1	100	98.865	Rhinopithecus_roxellana
ENSPPRG00000004391	SF3A1	97	95.090	ENSSBOG00000021960	SF3A1	100	99.261	Saimiri_boliviensis_boliviensis
ENSPPRG00000004391	SF3A1	97	95.472	ENSSHAG00000003666	SF3A1	98	95.472	Sarcophilus_harrisii
ENSPPRG00000004391	SF3A1	100	83.500	ENSSFOG00015004579	sf3a1	99	85.256	Scleropages_formosus
ENSPPRG00000004391	SF3A1	100	81.509	ENSSMAG00000004275	sf3a1	97	82.745	Scophthalmus_maximus
ENSPPRG00000004391	SF3A1	100	83.648	ENSSDUG00000022219	sf3a1	99	84.399	Seriola_dumerili
ENSPPRG00000004391	SF3A1	100	83.648	ENSSLDG00000012642	sf3a1	99	84.399	Seriola_lalandi_dorsalis
ENSPPRG00000004391	SF3A1	97	95.855	ENSSARG00000005960	SF3A1	100	95.855	Sorex_araneus
ENSPPRG00000004391	SF3A1	96	91.969	ENSSPUG00000018863	SF3A1	100	91.667	Sphenodon_punctatus
ENSPPRG00000004391	SF3A1	100	84.403	ENSSPAG00000011856	sf3a1	99	84.783	Stegastes_partitus
ENSPPRG00000004391	SF3A1	100	99.369	ENSSSCG00000010002	SF3A1	100	99.369	Sus_scrofa
ENSPPRG00000004391	SF3A1	95	94.195	ENSTGUG00000010547	SF3A1	99	93.515	Taeniopygia_guttata
ENSPPRG00000004391	SF3A1	100	81.384	ENSTRUG00000006118	sf3a1	97	82.222	Takifugu_rubripes
ENSPPRG00000004391	SF3A1	64	81.413	ENSTNIG00000005713	sf3a1	89	86.607	Tetraodon_nigroviridis
ENSPPRG00000004391	SF3A1	100	91.551	ENSTBEG00000012771	SF3A1	100	91.551	Tupaia_belangeri
ENSPPRG00000004391	SF3A1	100	99.118	ENSTTRG00000001535	SF3A1	100	99.118	Tursiops_truncatus
ENSPPRG00000004391	SF3A1	99	98.729	ENSUAMG00000006750	SF3A1	99	98.729	Ursus_americanus
ENSPPRG00000004391	SF3A1	99	98.597	ENSUMAG00000016665	SF3A1	98	99.611	Ursus_maritimus
ENSPPRG00000004391	SF3A1	100	99.748	ENSVVUG00000003075	SF3A1	100	99.748	Vulpes_vulpes
ENSPPRG00000004391	SF3A1	100	85.947	ENSXETG00000016144	sf3a1	100	85.445	Xenopus_tropicalis
ENSPPRG00000004391	SF3A1	100	82.642	ENSXCOG00000015653	sf3a1	97	84.314	Xiphophorus_couchianus
ENSPPRG00000004391	SF3A1	100	82.767	ENSXMAG00000002753	sf3a1	97	84.444	Xiphophorus_maculatus