EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000004420 (Gene tree)
Gene ID: 109268946
Gene Symbol: RBM28
Alias: -
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 31914 bases
Position: chrKV860295.1:8089899-8121812
Accession: 109268946
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000010133	RRM_1	PF00076.22	4.9e-57	1	3
ENSPPRP00000010133	RRM_1	PF00076.22	4.9e-57	2	3
ENSPPRP00000010133	RRM_1	PF00076.22	4.9e-57	3	3
ENSPPRP00000010125	RRM_1	PF00076.22	4e-29	1	2
ENSPPRP00000010125	RRM_1	PF00076.22	4e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000008051	RBM28-202	1821	-	ENSPPRP00000010125	606 (aa)	-	-
ENSPPRT00000008047	RBM28-201	2244	XM_019452646	ENSPPRP00000010133	747 (aa)	XP_019308191	-

Gene Model

Click here to download ENSPPRG00000004420's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000004420's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000004420	RBM28	100	100.000	ENSG00000106344	RBM28	100	100.000	Homo_sapiens
ENSPPRG00000004420	RBM28	78	61.538	ENSAPOG00000015512	rbm28	100	50.190	Acanthochromis_polyacanthus
ENSPPRG00000004420	RBM28	100	97.500	ENSAMEG00000004776	RBM28	90	94.565	Ailuropoda_melanoleuca
ENSPPRG00000004420	RBM28	69	55.476	ENSACIG00000023153	rbm28	100	51.674	Amphilophus_citrinellus
ENSPPRG00000004420	RBM28	78	62.500	ENSAOCG00000000462	rbm28	100	50.636	Amphiprion_ocellaris
ENSPPRG00000004420	RBM28	78	62.500	ENSAPEG00000012996	rbm28	100	50.701	Amphiprion_percula
ENSPPRG00000004420	RBM28	80	65.000	ENSATEG00000001672	rbm28	100	50.064	Anabas_testudineus
ENSPPRG00000004420	RBM28	100	100.000	ENSANAG00000033922	RBM28	100	84.656	Aotus_nancymaae
ENSPPRG00000004420	RBM28	100	52.632	ENSACLG00000025024	rbm28	100	50.381	Astatotilapia_calliptera
ENSPPRG00000004420	RBM28	72	58.314	ENSAMXG00000000763	rbm28	99	59.909	Astyanax_mexicanus
ENSPPRG00000004420	RBM28	100	100.000	ENSBTAG00000017001	RBM28	100	100.000	Bos_taurus
ENSPPRG00000004420	RBM28	100	100.000	ENSCJAG00000017731	RBM28	100	82.438	Callithrix_jacchus
ENSPPRG00000004420	RBM28	100	95.000	ENSCAFG00000001667	RBM28	100	90.293	Canis_familiaris
ENSPPRG00000004420	RBM28	100	95.000	ENSCAFG00020021648	RBM28	100	90.293	Canis_lupus_dingo
ENSPPRG00000004420	RBM28	100	100.000	ENSCHIG00000014146	RBM28	100	84.218	Capra_hircus
ENSPPRG00000004420	RBM28	100	95.000	ENSTSYG00000002892	RBM28	100	95.000	Carlito_syrichta
ENSPPRG00000004420	RBM28	83	60.806	ENSCAPG00000013218	RBM28	98	60.492	Cavia_aperea
ENSPPRG00000004420	RBM28	100	95.000	ENSCPOG00000006253	RBM28	100	81.555	Cavia_porcellus
ENSPPRG00000004420	RBM28	100	100.000	ENSCCAG00000035105	RBM28	100	83.947	Cebus_capucinus
ENSPPRG00000004420	RBM28	100	97.500	ENSCATG00000040497	RBM28	100	97.500	Cercocebus_atys
ENSPPRG00000004420	RBM28	100	95.000	ENSCLAG00000003707	RBM28	90	95.000	Chinchilla_lanigera
ENSPPRG00000004420	RBM28	100	100.000	ENSCSAG00000010161	RBM28	100	83.816	Chlorocebus_sabaeus
ENSPPRG00000004420	RBM28	66	81.908	ENSCHOG00000001994	-	63	88.710	Choloepus_hoffmanni
ENSPPRG00000004420	RBM28	63	60.412	ENSCPBG00000018088	RBM28	86	58.747	Chrysemys_picta_bellii
ENSPPRG00000004420	RBM28	95	40.237	ENSCING00000009238	-	84	40.419	Ciona_intestinalis
ENSPPRG00000004420	RBM28	55	43.195	ENSCSAVG00000007149	-	95	43.323	Ciona_savignyi
ENSPPRG00000004420	RBM28	88	100.000	ENSCANG00000038397	RBM28	100	100.000	Colobus_angolensis_palliatus
ENSPPRG00000004420	RBM28	89	100.000	ENSCGRG00001021278	Rbm28	82	100.000	Cricetulus_griseus_chok1gshd
ENSPPRG00000004420	RBM28	100	100.000	ENSCGRG00000005098	Rbm28	82	100.000	Cricetulus_griseus_crigri
ENSPPRG00000004420	RBM28	100	54.545	ENSCSEG00000004212	rbm28	100	50.522	Cynoglossus_semilaevis
ENSPPRG00000004420	RBM28	79	65.000	ENSCVAG00000010493	rbm28	99	50.192	Cyprinodon_variegatus
ENSPPRG00000004420	RBM28	88	54.506	ENSDARG00000025332	rbm28	100	50.472	Danio_rerio
ENSPPRG00000004420	RBM28	100	100.000	ENSDNOG00000001124	RBM28	100	84.190	Dasypus_novemcinctus
ENSPPRG00000004420	RBM28	82	80.000	ENSDORG00000004184	Rbm28	98	80.200	Dipodomys_ordii
ENSPPRG00000004420	RBM28	69	40.326	FBgn0260456	CG4806	69	40.481	Drosophila_melanogaster
ENSPPRG00000004420	RBM28	100	90.909	ENSETEG00000007130	RBM28	82	90.909	Echinops_telfairi
ENSPPRG00000004420	RBM28	99	40.915	ENSEBUG00000004419	rbm28	98	40.667	Eptatretus_burgeri
ENSPPRG00000004420	RBM28	100	97.500	ENSEASG00005008528	RBM28	100	85.938	Equus_asinus_asinus
ENSPPRG00000004420	RBM28	100	97.500	ENSECAG00000007745	RBM28	100	85.436	Equus_caballus
ENSPPRG00000004420	RBM28	100	95.000	ENSEEUG00000002389	RBM28	82	95.000	Erinaceus_europaeus
ENSPPRG00000004420	RBM28	100	62.500	ENSELUG00000020602	rbm28	100	51.372	Esox_lucius
ENSPPRG00000004420	RBM28	100	100.000	ENSFCAG00000000946	RBM28	100	100.000	Felis_catus
ENSPPRG00000004420	RBM28	100	92.500	ENSFDAG00000010169	RBM28	100	83.266	Fukomys_damarensis
ENSPPRG00000004420	RBM28	83	52.500	ENSGMOG00000007091	rbm28	99	49.194	Gadus_morhua
ENSPPRG00000004420	RBM28	72	55.928	ENSGAFG00000004802	rbm28	97	55.804	Gambusia_affinis
ENSPPRG00000004420	RBM28	77	65.714	ENSGACG00000012612	rbm28	100	50.792	Gasterosteus_aculeatus
ENSPPRG00000004420	RBM28	77	79.121	ENSGAGG00000008873	RBM28	93	79.121	Gopherus_agassizii
ENSPPRG00000004420	RBM28	95	82.271	ENSGGOG00000004644	RBM28	97	82.687	Gorilla_gorilla
ENSPPRG00000004420	RBM28	90	51.783	ENSHBUG00000009611	rbm28	94	51.485	Haplochromis_burtoni
ENSPPRG00000004420	RBM28	100	95.000	ENSHGLG00000005409	RBM28	100	82.999	Heterocephalus_glaber_female
ENSPPRG00000004420	RBM28	100	95.000	ENSHGLG00100016458	RBM28	100	82.999	Heterocephalus_glaber_male
ENSPPRG00000004420	RBM28	79	67.500	ENSHCOG00000010597	rbm28	74	67.500	Hippocampus_comes
ENSPPRG00000004420	RBM28	70	49.645	ENSIPUG00000007103	rbm28	94	46.721	Ictalurus_punctatus
ENSPPRG00000004420	RBM28	100	93.182	ENSSTOG00000002169	RBM28	100	82.008	Ictidomys_tridecemlineatus
ENSPPRG00000004420	RBM28	96	97.500	ENSJJAG00000022400	Rbm28	100	74.605	Jaculus_jaculus
ENSPPRG00000004420	RBM28	80	65.000	ENSLBEG00000012998	rbm28	100	50.383	Labrus_bergylta
ENSPPRG00000004420	RBM28	67	76.667	ENSLACG00000010485	-	100	58.824	Latimeria_chalumnae
ENSPPRG00000004420	RBM28	89	70.000	ENSLOCG00000015541	rbm28	84	63.402	Lepisosteus_oculatus
ENSPPRG00000004420	RBM28	100	100.000	ENSLAFG00000010717	RBM28	100	82.695	Loxodonta_africana
ENSPPRG00000004420	RBM28	100	97.500	ENSMFAG00000031036	RBM28	100	97.500	Macaca_fascicularis
ENSPPRG00000004420	RBM28	100	97.500	ENSMMUG00000007250	RBM28	100	97.500	Macaca_mulatta
ENSPPRG00000004420	RBM28	100	97.500	ENSMNEG00000036970	RBM28	100	97.500	Macaca_nemestrina
ENSPPRG00000004420	RBM28	80	97.500	ENSMLEG00000037717	RBM28	100	82.128	Mandrillus_leucophaeus
ENSPPRG00000004420	RBM28	100	62.500	ENSMAMG00000008525	rbm28	100	51.861	Mastacembelus_armatus
ENSPPRG00000004420	RBM28	93	49.520	ENSMZEG00005019625	rbm28	100	49.932	Maylandia_zebra
ENSPPRG00000004420	RBM28	100	100.000	ENSMAUG00000002263	Rbm28	82	100.000	Mesocricetus_auratus
ENSPPRG00000004420	RBM28	94	78.559	ENSMICG00000000107	RBM28	100	79.806	Microcebus_murinus
ENSPPRG00000004420	RBM28	100	100.000	ENSMOCG00000014615	Rbm28	81	100.000	Microtus_ochrogaster
ENSPPRG00000004420	RBM28	72	53.899	ENSMMOG00000008600	rbm28	100	51.240	Mola_mola
ENSPPRG00000004420	RBM28	100	87.500	ENSMODG00000015151	RBM28	100	72.656	Monodelphis_domestica
ENSPPRG00000004420	RBM28	79	65.000	ENSMALG00000006419	rbm28	100	49.352	Monopterus_albus
ENSPPRG00000004420	RBM28	100	97.500	MGP_CAROLIEiJ_G0028162	Rbm28	82	97.500	Mus_caroli
ENSPPRG00000004420	RBM28	100	97.500	ENSMUSG00000029701	Rbm28	100	79.654	Mus_musculus
ENSPPRG00000004420	RBM28	100	97.500	MGP_PahariEiJ_G0021920	Rbm28	100	79.868	Mus_pahari
ENSPPRG00000004420	RBM28	100	97.500	MGP_SPRETEiJ_G0029162	Rbm28	100	80.053	Mus_spretus
ENSPPRG00000004420	RBM28	100	100.000	ENSMPUG00000006511	RBM28	100	89.328	Mustela_putorius_furo
ENSPPRG00000004420	RBM28	100	100.000	ENSMLUG00000002186	RBM28	100	85.714	Myotis_lucifugus
ENSPPRG00000004420	RBM28	100	92.500	ENSNGAG00000017946	-	100	77.674	Nannospalax_galili
ENSPPRG00000004420	RBM28	100	100.000	ENSNGAG00000006480	-	81	100.000	Nannospalax_galili
ENSPPRG00000004420	RBM28	100	100.000	ENSNLEG00000012307	RBM28	100	100.000	Nomascus_leucogenys
ENSPPRG00000004420	RBM28	82	82.099	ENSMEUG00000009611	RBM28	90	82.099	Notamacropus_eugenii
ENSPPRG00000004420	RBM28	77	95.000	ENSOPRG00000015140	RBM28	90	74.759	Ochotona_princeps
ENSPPRG00000004420	RBM28	100	77.158	ENSODEG00000003213	-	100	77.556	Octodon_degus
ENSPPRG00000004420	RBM28	93	69.714	ENSODEG00000013217	-	99	68.571	Octodon_degus
ENSPPRG00000004420	RBM28	81	53.744	ENSONIG00000014924	rbm28	100	49.806	Oreochromis_niloticus
ENSPPRG00000004420	RBM28	100	85.000	ENSOANG00000000815	-	82	85.000	Ornithorhynchus_anatinus
ENSPPRG00000004420	RBM28	100	100.000	ENSOCUG00000003009	RBM28	82	100.000	Oryctolagus_cuniculus
ENSPPRG00000004420	RBM28	99	67.500	ENSORLG00000009636	rbm28	82	67.500	Oryzias_latipes
ENSPPRG00000004420	RBM28	80	67.500	ENSORLG00020002123	rbm28	99	50.386	Oryzias_latipes_hni
ENSPPRG00000004420	RBM28	79	67.500	ENSORLG00015015030	rbm28	98	59.223	Oryzias_latipes_hsok
ENSPPRG00000004420	RBM28	79	67.500	ENSOMEG00000007801	rbm28	100	52.174	Oryzias_melastigma
ENSPPRG00000004420	RBM28	94	92.500	ENSOGAG00000006011	RBM28	100	92.500	Otolemur_garnettii
ENSPPRG00000004420	RBM28	100	100.000	ENSOARG00000002547	RBM28	100	84.064	Ovis_aries
ENSPPRG00000004420	RBM28	100	100.000	ENSPPAG00000041730	RBM28	100	100.000	Pan_paniscus
ENSPPRG00000004420	RBM28	100	100.000	ENSPTIG00000008550	RBM28	100	100.000	Panthera_tigris_altaica
ENSPPRG00000004420	RBM28	100	100.000	ENSPTRG00000019659	RBM28	100	100.000	Pan_troglodytes
ENSPPRG00000004420	RBM28	100	97.500	ENSPANG00000022295	RBM28	100	97.500	Papio_anubis
ENSPPRG00000004420	RBM28	99	57.500	ENSPKIG00000023453	rbm28	99	50.630	Paramormyrops_kingsleyae
ENSPPRG00000004420	RBM28	84	59.606	ENSPMGG00000012840	rbm28	100	49.130	Periophthalmus_magnuspinnatus
ENSPPRG00000004420	RBM28	95	100.000	ENSPEMG00000020673	Rbm28	80	100.000	Peromyscus_maniculatus_bairdii
ENSPPRG00000004420	RBM28	59	45.119	ENSPMAG00000002948	-	99	46.237	Petromyzon_marinus
ENSPPRG00000004420	RBM28	100	87.500	ENSPCIG00000012810	RBM28	100	72.032	Phascolarctos_cinereus
ENSPPRG00000004420	RBM28	82	65.000	ENSPFOG00000018209	rbm28	100	50.326	Poecilia_formosa
ENSPPRG00000004420	RBM28	81	65.000	ENSPLAG00000016078	rbm28	96	49.805	Poecilia_latipinna
ENSPPRG00000004420	RBM28	82	65.000	ENSPMEG00000004292	rbm28	100	50.260	Poecilia_mexicana
ENSPPRG00000004420	RBM28	80	65.000	ENSPREG00000014287	rbm28	98	50.728	Poecilia_reticulata
ENSPPRG00000004420	RBM28	100	100.000	ENSPPYG00000017975	RBM28	100	84.079	Pongo_abelii
ENSPPRG00000004420	RBM28	65	97.500	ENSPCAG00000008223	RBM28	83	76.454	Procavia_capensis
ENSPPRG00000004420	RBM28	100	100.000	ENSPCOG00000016797	RBM28	100	100.000	Propithecus_coquereli
ENSPPRG00000004420	RBM28	73	100.000	ENSPVAG00000005443	RBM28	77	92.093	Pteropus_vampyrus
ENSPPRG00000004420	RBM28	100	52.632	ENSPNYG00000014003	rbm28	100	50.255	Pundamilia_nyererei
ENSPPRG00000004420	RBM28	100	97.500	ENSRNOG00000005468	Rbm28	82	97.500	Rattus_norvegicus
ENSPPRG00000004420	RBM28	100	100.000	ENSRBIG00000033990	RBM28	100	100.000	Rhinopithecus_bieti
ENSPPRG00000004420	RBM28	100	100.000	ENSRROG00000040747	RBM28	100	100.000	Rhinopithecus_roxellana
ENSPPRG00000004420	RBM28	82	100.000	ENSSBOG00000012308	RBM28	100	79.058	Saimiri_boliviensis_boliviensis
ENSPPRG00000004420	RBM28	96	67.950	ENSSHAG00000017017	RBM28	99	68.966	Sarcophilus_harrisii
ENSPPRG00000004420	RBM28	77	62.500	ENSSFOG00015001231	rbm28	100	54.581	Scleropages_formosus
ENSPPRG00000004420	RBM28	72	53.620	ENSSMAG00000003885	rbm28	99	50.913	Scophthalmus_maximus
ENSPPRG00000004420	RBM28	73	55.333	ENSSDUG00000014270	rbm28	98	52.569	Seriola_dumerili
ENSPPRG00000004420	RBM28	79	57.500	ENSSLDG00000020099	rbm28	100	49.116	Seriola_lalandi_dorsalis
ENSPPRG00000004420	RBM28	72	97.500	ENSSARG00000008303	RBM28	81	87.218	Sorex_araneus
ENSPPRG00000004420	RBM28	67	73.529	ENSSPUG00000000838	RBM28	79	73.529	Sphenodon_punctatus
ENSPPRG00000004420	RBM28	72	53.084	ENSSPAG00000023305	rbm28	100	49.733	Stegastes_partitus
ENSPPRG00000004420	RBM28	100	100.000	ENSSSCG00000031847	RBM28	100	85.073	Sus_scrofa
ENSPPRG00000004420	RBM28	80	65.000	ENSTRUG00000013311	rbm28	99	49.563	Takifugu_rubripes
ENSPPRG00000004420	RBM28	99	65.000	ENSTNIG00000017962	rbm28	99	51.625	Tetraodon_nigroviridis
ENSPPRG00000004420	RBM28	86	86.686	ENSTBEG00000012749	RBM28	86	86.686	Tupaia_belangeri
ENSPPRG00000004420	RBM28	100	100.000	ENSTTRG00000013647	RBM28	100	82.392	Tursiops_truncatus
ENSPPRG00000004420	RBM28	100	100.000	ENSUAMG00000006949	RBM28	85	100.000	Ursus_americanus
ENSPPRG00000004420	RBM28	100	100.000	ENSUMAG00000005997	RBM28	100	90.092	Ursus_maritimus
ENSPPRG00000004420	RBM28	94	76.614	ENSVPAG00000008304	RBM28	88	79.363	Vicugna_pacos
ENSPPRG00000004420	RBM28	100	95.000	ENSVVUG00000007270	RBM28	100	90.027	Vulpes_vulpes
ENSPPRG00000004420	RBM28	99	67.500	ENSXETG00000009271	rbm28	99	55.939	Xenopus_tropicalis
ENSPPRG00000004420	RBM28	72	53.531	ENSXCOG00000020357	rbm28	99	52.917	Xiphophorus_couchianus
ENSPPRG00000004420	RBM28	79	67.500	ENSXMAG00000004415	rbm28	98	50.262	Xiphophorus_maculatus