EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000005009 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 360 bases
Position: chrKV860691.1:43295-43654
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000011036	LSM	PF01423.22	5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000009012	-	279	-	ENSPPRP00000011036	92 (aa)	-	-

Gene Model

Click here to download ENSPPRG00000005009's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000005009's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000005009	-	92	72.321	ENSPPRG00000002399	SNRPD1	94	72.321

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000005009	-	92	72.321	ENSG00000167088	SNRPD1	100	79.221	Homo_sapiens
ENSPPRG00000005009	-	92	70.536	ENSAPOG00000019446	snrpd1	61	70.536	Acanthochromis_polyacanthus
ENSPPRG00000005009	-	88	71.296	ENSAMEG00000002576	SNRPD1	80	64.894	Ailuropoda_melanoleuca
ENSPPRG00000005009	-	85	68.571	ENSACIG00000011263	snrpd1	94	68.571	Amphilophus_citrinellus
ENSPPRG00000005009	-	92	70.536	ENSAOCG00000007406	snrpd1	94	70.536	Amphiprion_ocellaris
ENSPPRG00000005009	-	92	66.071	ENSAPEG00000014961	snrpd1	94	66.071	Amphiprion_percula
ENSPPRG00000005009	-	85	68.571	ENSAPEG00000012539	SNRPD1	94	68.571	Amphiprion_percula
ENSPPRG00000005009	-	92	70.536	ENSATEG00000014399	snrpd1	94	70.536	Anabas_testudineus
ENSPPRG00000005009	-	88	71.296	ENSAPLG00000012256	SNRPD1	77	66.304	Anas_platyrhynchos
ENSPPRG00000005009	-	92	72.321	ENSACAG00000006364	SNRPD1	94	72.321	Anolis_carolinensis
ENSPPRG00000005009	-	92	72.321	ENSANAG00000025641	SNRPD1	94	72.321	Aotus_nancymaae
ENSPPRG00000005009	-	85	68.571	ENSACLG00000017406	snrpd1	94	68.571	Astatotilapia_calliptera
ENSPPRG00000005009	-	92	71.429	ENSAMXG00000004589	snrpd1	94	71.429	Astyanax_mexicanus
ENSPPRG00000005009	-	79	65.000	ENSBTAG00000055316	-	86	65.000	Bos_taurus
ENSPPRG00000005009	-	92	69.643	ENSBTAG00000047266	-	94	69.643	Bos_taurus
ENSPPRG00000005009	-	75	66.667	ENSBTAG00000012376	-	72	66.667	Bos_taurus
ENSPPRG00000005009	-	92	72.321	ENSBTAG00000008292	SNRPD1	94	72.321	Bos_taurus
ENSPPRG00000005009	-	66	54.545	WBGene00004916	snr-3	76	52.083	Caenorhabditis_elegans
ENSPPRG00000005009	-	92	72.321	ENSCJAG00000042955	SNRPD1	94	72.321	Callithrix_jacchus
ENSPPRG00000005009	-	92	72.321	ENSCAFG00000018247	SNRPD1	94	72.321	Canis_familiaris
ENSPPRG00000005009	-	74	67.368	ENSCAFG00020015914	SNRPD1	74	67.368	Canis_lupus_dingo
ENSPPRG00000005009	-	92	69.643	ENSCHIG00000005557	SNRPD1	92	70.909	Capra_hircus
ENSPPRG00000005009	-	92	72.321	ENSTSYG00000030028	SNRPD1	94	72.321	Carlito_syrichta
ENSPPRG00000005009	-	88	70.370	ENSCAPG00000008103	SNRPD1	79	65.217	Cavia_aperea
ENSPPRG00000005009	-	92	72.321	ENSCPOG00000004679	SNRPD1	94	72.321	Cavia_porcellus
ENSPPRG00000005009	-	82	67.647	ENSCCAG00000005390	-	86	67.647	Cebus_capucinus
ENSPPRG00000005009	-	92	71.429	ENSCCAG00000020611	-	94	71.429	Cebus_capucinus
ENSPPRG00000005009	-	92	72.321	ENSCCAG00000032658	SNRPD1	94	72.321	Cebus_capucinus
ENSPPRG00000005009	-	92	71.429	ENSCCAG00000016652	-	94	71.429	Cebus_capucinus
ENSPPRG00000005009	-	92	72.321	ENSCATG00000039978	SNRPD1	94	72.321	Cercocebus_atys
ENSPPRG00000005009	-	92	72.321	ENSCLAG00000008691	SNRPD1	94	72.321	Chinchilla_lanigera
ENSPPRG00000005009	-	92	72.321	ENSCSAG00000017654	SNRPD1	94	72.321	Chlorocebus_sabaeus
ENSPPRG00000005009	-	92	72.321	ENSCPBG00000023143	SNRPD1	94	72.321	Chrysemys_picta_bellii
ENSPPRG00000005009	-	64	59.302	ENSCING00000024100	-	69	59.302	Ciona_intestinalis
ENSPPRG00000005009	-	65	58.621	ENSCSAVG00000004578	-	70	58.621	Ciona_savignyi
ENSPPRG00000005009	-	92	72.321	ENSCGRG00001021055	-	94	72.321	Cricetulus_griseus_chok1gshd
ENSPPRG00000005009	-	75	61.905	ENSCGRG00001009945	-	85	61.905	Cricetulus_griseus_chok1gshd
ENSPPRG00000005009	-	75	61.905	ENSCGRG00000006224	-	85	61.905	Cricetulus_griseus_crigri
ENSPPRG00000005009	-	92	72.321	ENSCGRG00000000490	-	94	72.321	Cricetulus_griseus_crigri
ENSPPRG00000005009	-	82	67.647	ENSCSEG00000018141	snrpd1	86	67.647	Cynoglossus_semilaevis
ENSPPRG00000005009	-	92	70.536	ENSCVAG00000000534	snrpd1	94	70.536	Cyprinodon_variegatus
ENSPPRG00000005009	-	92	71.429	ENSDARG00000011648	snrpd1	94	71.429	Danio_rerio
ENSPPRG00000005009	-	92	72.321	ENSDNOG00000040310	SNRPD1	94	72.321	Dasypus_novemcinctus
ENSPPRG00000005009	-	92	72.321	ENSDORG00000008349	Snrpd1	94	72.321	Dipodomys_ordii
ENSPPRG00000005009	-	73	57.447	FBgn0261933	SmD1	76	57.447	Drosophila_melanogaster
ENSPPRG00000005009	-	92	66.964	ENSEBUG00000003170	snrpd1	94	66.964	Eptatretus_burgeri
ENSPPRG00000005009	-	85	70.476	ENSEASG00005002433	SNRPD1	79	65.169	Equus_asinus_asinus
ENSPPRG00000005009	-	85	70.476	ENSECAG00000014373	SNRPD1	79	65.169	Equus_caballus
ENSPPRG00000005009	-	67	66.292	ENSEEUG00000004987	SNRPD1	100	66.292	Erinaceus_europaeus
ENSPPRG00000005009	-	91	61.261	ENSELUG00000000088	snrpd1	79	67.021	Esox_lucius
ENSPPRG00000005009	-	92	72.321	ENSFCAG00000012352	SNRPD1	94	72.321	Felis_catus
ENSPPRG00000005009	-	85	70.476	ENSFALG00000002646	SNRPD1	79	65.169	Ficedula_albicollis
ENSPPRG00000005009	-	92	71.429	ENSGMOG00000015607	snrpd1	94	71.429	Gadus_morhua
ENSPPRG00000005009	-	92	72.321	ENSGALG00000041334	SNRPD1	94	72.321	Gallus_gallus
ENSPPRG00000005009	-	92	70.536	ENSGAFG00000011171	snrpd1	94	70.536	Gambusia_affinis
ENSPPRG00000005009	-	92	71.429	ENSGACG00000005201	SNRPD1	94	71.429	Gasterosteus_aculeatus
ENSPPRG00000005009	-	92	72.321	ENSGAGG00000011197	SNRPD1	94	72.321	Gopherus_agassizii
ENSPPRG00000005009	-	92	72.321	ENSGGOG00000041053	SNRPD1	94	72.321	Gorilla_gorilla
ENSPPRG00000005009	-	75	62.500	ENSGGOG00000026706	-	80	62.500	Gorilla_gorilla
ENSPPRG00000005009	-	92	70.536	ENSHBUG00000003236	snrpd1	94	70.536	Haplochromis_burtoni
ENSPPRG00000005009	-	92	72.321	ENSHGLG00000007152	SNRPD1	94	72.321	Heterocephalus_glaber_female
ENSPPRG00000005009	-	92	72.321	ENSHGLG00100008618	SNRPD1	94	72.321	Heterocephalus_glaber_male
ENSPPRG00000005009	-	92	70.536	ENSIPUG00000003576	snrpd1	94	70.536	Ictalurus_punctatus
ENSPPRG00000005009	-	92	72.321	ENSSTOG00000000485	SNRPD1	94	72.321	Ictidomys_tridecemlineatus
ENSPPRG00000005009	-	92	72.321	ENSJJAG00000017698	Snrpd1	94	72.321	Jaculus_jaculus
ENSPPRG00000005009	-	92	70.536	ENSKMAG00000005987	snrpd1	94	70.536	Kryptolebias_marmoratus
ENSPPRG00000005009	-	92	70.536	ENSLBEG00000003327	snrpd1	94	70.536	Labrus_bergylta
ENSPPRG00000005009	-	92	72.321	ENSLACG00000001955	SNRPD1	94	72.321	Latimeria_chalumnae
ENSPPRG00000005009	-	90	70.000	ENSLOCG00000002003	snrpd1	94	70.000	Lepisosteus_oculatus
ENSPPRG00000005009	-	91	70.270	ENSLAFG00000005819	SNRPD1	94	70.270	Loxodonta_africana
ENSPPRG00000005009	-	92	72.321	ENSMFAG00000042080	SNRPD1	94	72.321	Macaca_fascicularis
ENSPPRG00000005009	-	87	71.028	ENSMMUG00000003992	SNRPD1	78	65.934	Macaca_mulatta
ENSPPRG00000005009	-	92	72.321	ENSMNEG00000041296	SNRPD1	94	72.321	Macaca_nemestrina
ENSPPRG00000005009	-	92	72.321	ENSMLEG00000028659	SNRPD1	94	72.321	Mandrillus_leucophaeus
ENSPPRG00000005009	-	92	70.536	ENSMAMG00000012971	snrpd1	94	70.536	Mastacembelus_armatus
ENSPPRG00000005009	-	92	70.536	ENSMZEG00005004685	snrpd1	94	70.536	Maylandia_zebra
ENSPPRG00000005009	-	88	71.296	ENSMGAG00000011598	SNRPD1	76	66.304	Meleagris_gallopavo
ENSPPRG00000005009	-	75	58.333	ENSMAUG00000016502	-	86	58.333	Mesocricetus_auratus
ENSPPRG00000005009	-	75	58.333	ENSMAUG00000016467	-	86	58.333	Mesocricetus_auratus
ENSPPRG00000005009	-	76	63.918	ENSMAUG00000006829	-	59	66.667	Mesocricetus_auratus
ENSPPRG00000005009	-	92	72.321	ENSMICG00000044066	SNRPD1	94	72.321	Microcebus_murinus
ENSPPRG00000005009	-	92	72.321	ENSMOCG00000017367	Snrpd1	94	72.321	Microtus_ochrogaster
ENSPPRG00000005009	-	92	70.536	ENSMMOG00000019089	snrpd1	94	70.536	Mola_mola
ENSPPRG00000005009	-	92	72.321	ENSMODG00000021487	SNRPD1	94	72.321	Monodelphis_domestica
ENSPPRG00000005009	-	92	70.536	ENSMALG00000014459	snrpd1	94	70.536	Monopterus_albus
ENSPPRG00000005009	-	92	72.321	MGP_CAROLIEiJ_G0021994	Snrpd1	94	72.321	Mus_caroli
ENSPPRG00000005009	-	92	72.321	ENSMUSG00000002477	Snrpd1	94	72.321	Mus_musculus
ENSPPRG00000005009	-	92	72.321	MGP_PahariEiJ_G0018731	Snrpd1	94	72.321	Mus_pahari
ENSPPRG00000005009	-	92	72.321	MGP_SPRETEiJ_G0022910	Snrpd1	94	72.321	Mus_spretus
ENSPPRG00000005009	-	88	71.296	ENSMPUG00000005567	-	80	64.894	Mustela_putorius_furo
ENSPPRG00000005009	-	92	71.429	ENSMPUG00000020041	-	94	71.429	Mustela_putorius_furo
ENSPPRG00000005009	-	79	68.000	ENSMLUG00000009124	SNRPD1	78	68.000	Myotis_lucifugus
ENSPPRG00000005009	-	92	72.321	ENSNGAG00000023946	Snrpd1	94	72.321	Nannospalax_galili
ENSPPRG00000005009	-	73	65.957	ENSNBRG00000012119	snrpd1	78	65.957	Neolamprologus_brichardi
ENSPPRG00000005009	-	92	70.909	ENSNLEG00000031430	SNRPD1	94	70.909	Nomascus_leucogenys
ENSPPRG00000005009	-	92	72.321	ENSODEG00000005764	SNRPD1	94	72.321	Octodon_degus
ENSPPRG00000005009	-	92	70.536	ENSONIG00000002486	snrpd1	94	70.536	Oreochromis_niloticus
ENSPPRG00000005009	-	77	60.204	ENSOANG00000004638	-	82	60.204	Ornithorhynchus_anatinus
ENSPPRG00000005009	-	88	71.296	ENSOCUG00000023761	-	80	64.894	Oryctolagus_cuniculus
ENSPPRG00000005009	-	92	71.429	ENSOCUG00000014399	-	94	71.429	Oryctolagus_cuniculus
ENSPPRG00000005009	-	85	68.571	ENSORLG00000012516	snrpd1	94	68.571	Oryzias_latipes
ENSPPRG00000005009	-	92	70.536	ENSORLG00020005743	snrpd1	94	70.536	Oryzias_latipes_hni
ENSPPRG00000005009	-	92	70.536	ENSORLG00015013402	snrpd1	94	70.536	Oryzias_latipes_hsok
ENSPPRG00000005009	-	92	70.536	ENSOMEG00000011571	snrpd1	94	70.536	Oryzias_melastigma
ENSPPRG00000005009	-	90	70.000	ENSOGAG00000007833	SNRPD1	79	64.894	Otolemur_garnettii
ENSPPRG00000005009	-	82	69.608	ENSOARG00000003413	-	77	69.608	Ovis_aries
ENSPPRG00000005009	-	92	72.321	ENSPPAG00000042593	SNRPD1	94	72.321	Pan_paniscus
ENSPPRG00000005009	-	87	71.028	ENSPTIG00000013206	SNRPD1	80	65.934	Panthera_tigris_altaica
ENSPPRG00000005009	-	82	64.706	ENSPTRG00000050159	-	87	64.706	Pan_troglodytes
ENSPPRG00000005009	-	92	72.321	ENSPTRG00000009909	SNRPD1	94	72.321	Pan_troglodytes
ENSPPRG00000005009	-	92	72.321	ENSPANG00000023478	SNRPD1	94	72.321	Papio_anubis
ENSPPRG00000005009	-	92	70.536	ENSPKIG00000003985	SNRPD1	94	70.536	Paramormyrops_kingsleyae
ENSPPRG00000005009	-	85	67.619	ENSPKIG00000021610	snrpd1	94	67.619	Paramormyrops_kingsleyae
ENSPPRG00000005009	-	92	70.536	ENSPMGG00000001862	snrpd1	94	70.536	Periophthalmus_magnuspinnatus
ENSPPRG00000005009	-	92	72.321	ENSPEMG00000014773	-	94	72.321	Peromyscus_maniculatus_bairdii
ENSPPRG00000005009	-	82	58.654	ENSPMAG00000003938	-	85	58.654	Petromyzon_marinus
ENSPPRG00000005009	-	92	72.321	ENSPCIG00000020320	SNRPD1	94	72.321	Phascolarctos_cinereus
ENSPPRG00000005009	-	82	67.647	ENSPFOG00000012448	SNRPD1	90	67.647	Poecilia_formosa
ENSPPRG00000005009	-	82	67.647	ENSPLAG00000006738	snrpd1	90	67.647	Poecilia_latipinna
ENSPPRG00000005009	-	82	67.647	ENSPMEG00000021942	snrpd1	90	67.647	Poecilia_mexicana
ENSPPRG00000005009	-	92	70.536	ENSPREG00000007094	snrpd1	94	70.536	Poecilia_reticulata
ENSPPRG00000005009	-	92	72.321	ENSPPYG00000025874	SNRPD1	94	72.321	Pongo_abelii
ENSPPRG00000005009	-	92	72.321	ENSPCOG00000013327	SNRPD1	94	72.321	Propithecus_coquereli
ENSPPRG00000005009	-	92	72.321	ENSPVAG00000005511	SNRPD1	75	72.321	Pteropus_vampyrus
ENSPPRG00000005009	-	92	70.536	ENSPNAG00000017824	snrpd1	94	70.536	Pygocentrus_nattereri
ENSPPRG00000005009	-	92	72.321	ENSRNOG00000013714	Snrpd1	94	72.321	Rattus_norvegicus
ENSPPRG00000005009	-	92	72.321	ENSRBIG00000022996	SNRPD1	94	72.321	Rhinopithecus_bieti
ENSPPRG00000005009	-	92	72.321	ENSRROG00000027640	SNRPD1	94	72.321	Rhinopithecus_roxellana
ENSPPRG00000005009	-	92	72.321	ENSSBOG00000020998	SNRPD1	94	72.321	Saimiri_boliviensis_boliviensis
ENSPPRG00000005009	-	92	72.321	ENSSHAG00000011791	SNRPD1	94	72.321	Sarcophilus_harrisii
ENSPPRG00000005009	-	92	69.643	ENSSFOG00015008809	-	94	69.643	Scleropages_formosus
ENSPPRG00000005009	-	92	69.643	ENSSFOG00015022253	-	94	69.643	Scleropages_formosus
ENSPPRG00000005009	-	92	70.536	ENSSMAG00000008765	snrpd1	94	70.536	Scophthalmus_maximus
ENSPPRG00000005009	-	88	68.519	ENSSDUG00000010521	snrpd1	92	67.890	Seriola_dumerili
ENSPPRG00000005009	-	92	70.536	ENSSLDG00000011858	snrpd1	94	70.536	Seriola_lalandi_dorsalis
ENSPPRG00000005009	-	92	72.321	ENSSPUG00000002824	SNRPD1	94	72.321	Sphenodon_punctatus
ENSPPRG00000005009	-	85	68.571	ENSSPAG00000015229	snrpd1	94	68.571	Stegastes_partitus
ENSPPRG00000005009	-	92	72.321	ENSSSCG00000003701	SNRPD1	94	72.321	Sus_scrofa
ENSPPRG00000005009	-	88	71.296	ENSTGUG00000005095	SNRPD1	77	66.304	Taeniopygia_guttata
ENSPPRG00000005009	-	85	69.524	ENSTRUG00000008977	snrpd1	94	69.524	Takifugu_rubripes
ENSPPRG00000005009	-	75	63.542	ENSTNIG00000001224	snrpd1	92	63.542	Tetraodon_nigroviridis
ENSPPRG00000005009	-	54	98.000	ENSTBEG00000013776	SNRPD1	57	98.000	Tupaia_belangeri
ENSPPRG00000005009	-	88	71.296	ENSTTRG00000002654	SNRPD1	80	66.304	Tursiops_truncatus
ENSPPRG00000005009	-	87	71.028	ENSUAMG00000013431	SNRPD1	94	68.085	Ursus_americanus
ENSPPRG00000005009	-	92	72.321	ENSUMAG00000019740	SNRPD1	94	72.321	Ursus_maritimus
ENSPPRG00000005009	-	92	72.321	ENSVPAG00000010056	SNRPD1	75	72.321	Vicugna_pacos
ENSPPRG00000005009	-	85	70.476	ENSVVUG00000004009	SNRPD1	79	65.169	Vulpes_vulpes
ENSPPRG00000005009	-	92	71.429	ENSXETG00000027354	snrpd1	94	71.429	Xenopus_tropicalis
ENSPPRG00000005009	-	92	70.536	ENSXCOG00000020108	snrpd1	94	70.536	Xiphophorus_couchianus
ENSPPRG00000005009	-	92	70.536	ENSXMAG00000003368	snrpd1	94	70.536	Xiphophorus_maculatus