EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000005859 (Gene tree)
Gene ID: 109268599
Gene Symbol: YBX3
Alias: -
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 28419 bases
Position: chrKV860294.1:241118-269536
Accession: 109268599
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000012257	CSD	PF00313.22	1.7e-26	1	1
ENSPPRP00000012249	CSD	PF00313.22	4.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000010290	YBX3-202	915	XM_019451969	ENSPPRP00000012249	304 (aa)	XP_019307514	-
ENSPPRT00000010288	YBX3-201	1119	XM_019451967	ENSPPRP00000012257	372 (aa)	XP_019307512	-

Gene Model

Click here to download ENSPPRG00000005859's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000005859's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000005859	YBX3	80	51.097	ENSPPRG00000014539	-	85	55.705

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000005859	YBX3	100	93.443	ENSG00000060138	YBX3	100	91.979	Homo_sapiens
ENSPPRG00000005859	YBX3	96	91.292	ENSAMEG00000009393	YBX3	95	94.083	Ailuropoda_melanoleuca
ENSPPRG00000005859	YBX3	76	67.133	ENSAPLG00000003147	YBX3	68	100.000	Anas_platyrhynchos
ENSPPRG00000005859	YBX3	90	94.048	ENSANAG00000024492	-	93	94.915	Aotus_nancymaae
ENSPPRG00000005859	YBX3	99	83.846	ENSANAG00000033366	-	100	66.776	Aotus_nancymaae
ENSPPRG00000005859	YBX3	100	85.195	ENSBTAG00000009663	YBX3	88	85.207	Bos_taurus
ENSPPRG00000005859	YBX3	100	92.459	ENSCJAG00000021660	-	100	91.176	Callithrix_jacchus
ENSPPRG00000005859	YBX3	95	71.034	ENSCJAG00000033824	-	85	89.189	Callithrix_jacchus
ENSPPRG00000005859	YBX3	77	96.864	ENSCAFG00000013401	YBX3	100	98.165	Canis_familiaris
ENSPPRG00000005859	YBX3	100	93.834	ENSCAFG00020006412	YBX3	100	93.834	Canis_lupus_dingo
ENSPPRG00000005859	YBX3	100	85.195	ENSCHIG00000010863	YBX3	93	87.870	Capra_hircus
ENSPPRG00000005859	YBX3	77	95.819	ENSTSYG00000004204	-	88	95.819	Carlito_syrichta
ENSPPRG00000005859	YBX3	100	75.987	ENSTSYG00000035821	-	89	77.037	Carlito_syrichta
ENSPPRG00000005859	YBX3	77	87.456	ENSCAPG00000015039	YBX3	93	87.456	Cavia_aperea
ENSPPRG00000005859	YBX3	78	88.396	ENSCPOG00000011329	YBX3	86	88.396	Cavia_porcellus
ENSPPRG00000005859	YBX3	100	93.443	ENSCCAG00000016469	YBX3	100	91.803	Cebus_capucinus
ENSPPRG00000005859	YBX3	100	93.443	ENSCATG00000034411	YBX3	100	92.246	Cercocebus_atys
ENSPPRG00000005859	YBX3	77	88.502	ENSCLAG00000016030	YBX3	94	88.502	Chinchilla_lanigera
ENSPPRG00000005859	YBX3	100	93.316	ENSCSAG00000008744	YBX3	100	91.979	Chlorocebus_sabaeus
ENSPPRG00000005859	YBX3	94	81.609	ENSCHOG00000011988	YBX3	77	81.609	Choloepus_hoffmanni
ENSPPRG00000005859	YBX3	78	80.345	ENSCPBG00000014147	YBX3	81	79.452	Chrysemys_picta_bellii
ENSPPRG00000005859	YBX3	79	94.576	ENSCANG00000036801	YBX3	94	94.576	Colobus_angolensis_palliatus
ENSPPRG00000005859	YBX3	85	91.798	ENSCGRG00001016148	Ybx3	100	84.987	Cricetulus_griseus_chok1gshd
ENSPPRG00000005859	YBX3	77	91.781	ENSCGRG00000004563	Ybx3	98	90.411	Cricetulus_griseus_crigri
ENSPPRG00000005859	YBX3	90	82.941	ENSDORG00000009103	Ybx3	81	91.986	Dipodomys_ordii
ENSPPRG00000005859	YBX3	76	85.315	ENSETEG00000002557	YBX3	99	84.155	Echinops_telfairi
ENSPPRG00000005859	YBX3	100	90.054	ENSEASG00005014726	YBX3	100	89.516	Equus_asinus_asinus
ENSPPRG00000005859	YBX3	100	94.086	ENSECAG00000013777	YBX3	100	94.086	Equus_caballus
ENSPPRG00000005859	YBX3	76	94.718	ENSEEUG00000010415	YBX3	100	94.718	Erinaceus_europaeus
ENSPPRG00000005859	YBX3	100	99.731	ENSFCAG00000027748	YBX3	100	99.731	Felis_catus
ENSPPRG00000005859	YBX3	71	94.444	ENSFALG00000003661	YBX3	71	98.837	Ficedula_albicollis
ENSPPRG00000005859	YBX3	77	84.669	ENSFDAG00000021192	YBX3	92	84.669	Fukomys_damarensis
ENSPPRG00000005859	YBX3	100	69.608	ENSGALG00000031890	YBX3	76	75.336	Gallus_gallus
ENSPPRG00000005859	YBX3	78	79.310	ENSGAGG00000017780	YBX3	77	83.408	Gopherus_agassizii
ENSPPRG00000005859	YBX3	100	93.770	ENSGGOG00000001352	YBX3	100	92.246	Gorilla_gorilla
ENSPPRG00000005859	YBX3	73	80.727	ENSHGLG00000015495	-	88	76.667	Heterocephalus_glaber_female
ENSPPRG00000005859	YBX3	81	76.873	ENSHGLG00000014798	-	86	78.451	Heterocephalus_glaber_female
ENSPPRG00000005859	YBX3	72	89.908	ENSHGLG00100003589	YBX3	87	89.908	Heterocephalus_glaber_male
ENSPPRG00000005859	YBX3	77	88.850	ENSSTOG00000002108	-	88	84.880	Ictidomys_tridecemlineatus
ENSPPRG00000005859	YBX3	92	87.536	ENSSTOG00000032577	-	94	87.021	Ictidomys_tridecemlineatus
ENSPPRG00000005859	YBX3	79	69.360	ENSJJAG00000014239	Ybx3	96	85.227	Jaculus_jaculus
ENSPPRG00000005859	YBX3	100	94.370	ENSLAFG00000017247	YBX3	100	93.298	Loxodonta_africana
ENSPPRG00000005859	YBX3	100	92.787	ENSMFAG00000039369	YBX3	100	91.711	Macaca_fascicularis
ENSPPRG00000005859	YBX3	87	93.231	ENSMMUG00000022469	YBX3	99	92.212	Macaca_mulatta
ENSPPRG00000005859	YBX3	100	92.513	ENSMNEG00000045109	YBX3	100	91.444	Macaca_nemestrina
ENSPPRG00000005859	YBX3	94	81.766	ENSMLEG00000033618	YBX3	79	94.425	Mandrillus_leucophaeus
ENSPPRG00000005859	YBX3	71	82.949	ENSMGAG00000014224	YBX3	100	80.645	Meleagris_gallopavo
ENSPPRG00000005859	YBX3	87	91.104	ENSMAUG00000012185	Ybx3	98	87.227	Mesocricetus_auratus
ENSPPRG00000005859	YBX3	100	93.029	ENSMICG00000038002	-	100	92.761	Microcebus_murinus
ENSPPRG00000005859	YBX3	100	76.316	ENSMICG00000031459	-	86	81.429	Microcebus_murinus
ENSPPRG00000005859	YBX3	81	93.729	ENSMOCG00000016291	Ybx3	96	92.203	Microtus_ochrogaster
ENSPPRG00000005859	YBX3	77	83.333	ENSMODG00000018248	YBX3	91	84.028	Monodelphis_domestica
ENSPPRG00000005859	YBX3	85	91.483	MGP_CAROLIEiJ_G0028947	Ybx3	100	84.987	Mus_caroli
ENSPPRG00000005859	YBX3	85	91.483	ENSMUSG00000030189	Ybx3	100	84.987	Mus_musculus
ENSPPRG00000005859	YBX3	85	91.483	MGP_PahariEiJ_G0022709	Ybx3	100	84.987	Mus_pahari
ENSPPRG00000005859	YBX3	85	91.798	MGP_SPRETEiJ_G0029994	Ybx3	100	85.255	Mus_spretus
ENSPPRG00000005859	YBX3	100	83.947	ENSMPUG00000011810	YBX3	100	83.158	Mustela_putorius_furo
ENSPPRG00000005859	YBX3	71	95.522	ENSMLUG00000007476	YBX3	100	95.522	Myotis_lucifugus
ENSPPRG00000005859	YBX3	85	85.535	ENSNGAG00000000710	Ybx3	100	83.534	Nannospalax_galili
ENSPPRG00000005859	YBX3	89	90.060	ENSNLEG00000034844	YBX3	91	88.785	Nomascus_leucogenys
ENSPPRG00000005859	YBX3	54	68.421	ENSMEUG00000002507	-	88	74.468	Notamacropus_eugenii
ENSPPRG00000005859	YBX3	86	84.062	ENSODEG00000017957	YBX3	94	84.062	Octodon_degus
ENSPPRG00000005859	YBX3	92	80.814	ENSOCUG00000001889	YBX3	85	87.797	Oryctolagus_cuniculus
ENSPPRG00000005859	YBX3	100	91.053	ENSOGAG00000013245	YBX3	100	90.789	Otolemur_garnettii
ENSPPRG00000005859	YBX3	69	98.969	ENSOARG00000020919	YBX3	99	84.122	Ovis_aries
ENSPPRG00000005859	YBX3	100	85.523	ENSPPAG00000039068	YBX3	82	94.915	Pan_paniscus
ENSPPRG00000005859	YBX3	77	99.301	ENSPTIG00000005322	YBX3	81	99.301	Panthera_tigris_altaica
ENSPPRG00000005859	YBX3	100	94.098	ENSPTRG00000004681	YBX3	100	92.513	Pan_troglodytes
ENSPPRG00000005859	YBX3	100	93.115	ENSPANG00000010280	YBX3	100	91.979	Papio_anubis
ENSPPRG00000005859	YBX3	71	85.185	ENSPSIG00000009247	YBX3	90	100.000	Pelodiscus_sinensis
ENSPPRG00000005859	YBX3	87	91.641	ENSPEMG00000012132	-	99	88.162	Peromyscus_maniculatus_bairdii
ENSPPRG00000005859	YBX3	81	91.093	ENSPEMG00000010391	-	85	92.035	Peromyscus_maniculatus_bairdii
ENSPPRG00000005859	YBX3	69	82.239	ENSPCIG00000029949	YBX3	100	80.309	Phascolarctos_cinereus
ENSPPRG00000005859	YBX3	100	92.781	ENSPPYG00000004279	YBX3	100	91.711	Pongo_abelii
ENSPPRG00000005859	YBX3	78	90.785	ENSPCAG00000001397	YBX3	98	90.972	Procavia_capensis
ENSPPRG00000005859	YBX3	54	68.421	ENSPCOG00000011663	YBX3	100	88.506	Propithecus_coquereli
ENSPPRG00000005859	YBX3	100	82.306	ENSPVAG00000006740	YBX3	100	82.306	Pteropus_vampyrus
ENSPPRG00000005859	YBX3	85	92.114	ENSRNOG00000005480	Ybx3	100	85.255	Rattus_norvegicus
ENSPPRG00000005859	YBX3	100	91.803	ENSRBIG00000039208	YBX3	100	91.176	Rhinopithecus_bieti
ENSPPRG00000005859	YBX3	100	92.787	ENSRROG00000029638	YBX3	100	91.475	Rhinopithecus_roxellana
ENSPPRG00000005859	YBX3	92	84.211	ENSSBOG00000030573	YBX3	86	93.127	Saimiri_boliviensis_boliviensis
ENSPPRG00000005859	YBX3	65	98.837	ENSSHAG00000003262	YBX3	98	81.443	Sarcophilus_harrisii
ENSPPRG00000005859	YBX3	100	95.263	ENSSSCG00000000633	YBX3	100	95.263	Sus_scrofa
ENSPPRG00000005859	YBX3	70	98.077	ENSTGUG00000012047	YBX3	74	98.077	Taeniopygia_guttata
ENSPPRG00000005859	YBX3	100	85.255	ENSTBEG00000012570	YBX3	88	89.028	Tupaia_belangeri
ENSPPRG00000005859	YBX3	70	87.218	ENSTTRG00000008045	YBX3	100	87.218	Tursiops_truncatus
ENSPPRG00000005859	YBX3	74	92.058	ENSUAMG00000016662	YBX3	100	92.419	Ursus_americanus
ENSPPRG00000005859	YBX3	77	97.203	ENSUMAG00000016118	YBX3	94	97.203	Ursus_maritimus
ENSPPRG00000005859	YBX3	57	100.000	ENSVPAG00000000876	YBX3	100	73.498	Vicugna_pacos
ENSPPRG00000005859	YBX3	74	94.585	ENSVVUG00000004956	YBX3	100	94.585	Vulpes_vulpes
ENSPPRG00000005859	YBX3	53	92.222	ENSXETG00000016239	ybx3	90	69.469	Xenopus_tropicalis