EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000006653 (Gene tree)
Gene ID: 109254682
Gene Symbol: FAM172A
Alias: -
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 387408 bases
Position: chrKV860392.1:1720873-2108280
Accession: 109254682
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000013400	Arb2	PF09757.9	2.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000011491	FAM172A-203	921	XM_019428785	ENSPPRP00000013393	306 (aa)	XP_019284330	UPI000298B3F5
ENSPPRT00000011488	FAM172A-202	1251	XM_019428786	ENSPPRP00000013400	416 (aa)	XP_019284331	UPI000298B58A
ENSPPRT00000011479	FAM172A-201	810	XM_019428795	ENSPPRP00000013379	269 (aa)	XP_019284340	UPI000DE7EDCA

Gene Model

Click here to download ENSPPRG00000006653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000006653's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000006653	FAM172A	100	97.837	ENSG00000113391	FAM172A	100	98.734	Homo_sapiens
ENSPPRG00000006653	FAM172A	100	86.779	ENSAPLG00000004055	FAM172A	97	87.871	Anas_platyrhynchos
ENSPPRG00000006653	FAM172A	54	38.961	ENSAPLG00000011555	-	97	38.961	Anas_platyrhynchos
ENSPPRG00000006653	FAM172A	91	87.302	ENSACAG00000013305	FAM172A	95	88.798	Anolis_carolinensis
ENSPPRG00000006653	FAM172A	89	89.218	ENSANAG00000035869	FAM172A	86	100.000	Aotus_nancymaae
ENSPPRG00000006653	FAM172A	100	99.038	ENSBTAG00000050195	FAM172A	100	99.038	Bos_taurus
ENSPPRG00000006653	FAM172A	100	98.317	ENSCJAG00000010444	FAM172A	100	98.317	Callithrix_jacchus
ENSPPRG00000006653	FAM172A	89	99.459	ENSCAFG00000008064	FAM172A	99	99.459	Canis_familiaris
ENSPPRG00000006653	FAM172A	100	97.837	ENSCAFG00020006210	FAM172A	100	97.837	Canis_lupus_dingo
ENSPPRG00000006653	FAM172A	100	98.798	ENSCHIG00000008440	FAM172A	100	98.798	Capra_hircus
ENSPPRG00000006653	FAM172A	64	98.872	ENSTSYG00000006286	FAM172A	85	98.872	Carlito_syrichta
ENSPPRG00000006653	FAM172A	54	87.611	ENSCAPG00000014103	-	100	87.611	Cavia_aperea
ENSPPRG00000006653	FAM172A	100	97.837	ENSCCAG00000023116	FAM172A	100	97.838	Cebus_capucinus
ENSPPRG00000006653	FAM172A	100	88.221	ENSCLAG00000005472	FAM172A	100	98.734	Chinchilla_lanigera
ENSPPRG00000006653	FAM172A	86	43.360	ENSCPBG00000004402	-	96	42.857	Chrysemys_picta_bellii
ENSPPRG00000006653	FAM172A	65	97.037	ENSCANG00000040412	FAM172A	92	97.037	Colobus_angolensis_palliatus
ENSPPRG00000006653	FAM172A	100	99.038	ENSDNOG00000004689	FAM172A	100	99.038	Dasypus_novemcinctus
ENSPPRG00000006653	FAM172A	65	97.037	ENSDORG00000013558	Fam172a	88	97.037	Dipodomys_ordii
ENSPPRG00000006653	FAM172A	79	40.303	ENSEBUG00000016097	-	62	40.000	Eptatretus_burgeri
ENSPPRG00000006653	FAM172A	97	95.556	ENSECAG00000018274	FAM172A	98	97.019	Equus_caballus
ENSPPRG00000006653	FAM172A	100	85.817	ENSEEUG00000002887	FAM172A	100	85.817	Erinaceus_europaeus
ENSPPRG00000006653	FAM172A	98	69.268	ENSELUG00000017647	fam172a	96	69.533	Esox_lucius
ENSPPRG00000006653	FAM172A	100	100.000	ENSFCAG00000025443	FAM172A	100	100.000	Felis_catus
ENSPPRG00000006653	FAM172A	87	87.879	ENSFALG00000009072	FAM172A	97	88.301	Ficedula_albicollis
ENSPPRG00000006653	FAM172A	86	43.733	ENSFALG00000006501	-	100	43.733	Ficedula_albicollis
ENSPPRG00000006653	FAM172A	100	86.779	ENSGALG00000014661	FAM172A	97	88.366	Gallus_gallus
ENSPPRG00000006653	FAM172A	84	44.759	ENSGAGG00000022828	-	93	44.350	Gopherus_agassizii
ENSPPRG00000006653	FAM172A	100	90.144	ENSGAGG00000003839	FAM172A	97	91.089	Gopherus_agassizii
ENSPPRG00000006653	FAM172A	100	97.596	ENSGGOG00000010296	FAM172A	100	97.596	Gorilla_gorilla
ENSPPRG00000006653	FAM172A	97	95.062	ENSHGLG00000011178	FAM172A	100	97.468	Heterocephalus_glaber_female
ENSPPRG00000006653	FAM172A	89	97.290	ENSHGLG00100013340	FAM172A	100	97.468	Heterocephalus_glaber_male
ENSPPRG00000006653	FAM172A	100	98.558	ENSSTOG00000009918	FAM172A	100	98.558	Ictidomys_tridecemlineatus
ENSPPRG00000006653	FAM172A	83	49.138	ENSLACG00000001532	si:ch73-41e3.7	92	49.138	Latimeria_chalumnae
ENSPPRG00000006653	FAM172A	100	74.224	ENSLOCG00000001629	fam172a	97	76.049	Lepisosteus_oculatus
ENSPPRG00000006653	FAM172A	65	97.037	ENSMFAG00000001171	FAM172A	92	97.037	Macaca_fascicularis
ENSPPRG00000006653	FAM172A	92	97.900	ENSMNEG00000039938	FAM172A	92	97.037	Macaca_nemestrina
ENSPPRG00000006653	FAM172A	100	98.798	ENSMICG00000030403	FAM172A	100	98.798	Microcebus_murinus
ENSPPRG00000006653	FAM172A	89	95.405	ENSMOCG00000003613	Fam172a	100	95.405	Microtus_ochrogaster
ENSPPRG00000006653	FAM172A	100	90.144	ENSMODG00000020131	FAM172A	97	90.842	Monodelphis_domestica
ENSPPRG00000006653	FAM172A	75	96.203	MGP_PahariEiJ_G0015818	Fam172a	100	96.203	Mus_pahari
ENSPPRG00000006653	FAM172A	89	98.108	ENSNGAG00000019570	Fam172a	100	98.108	Nannospalax_galili
ENSPPRG00000006653	FAM172A	65	97.037	ENSNLEG00000013903	FAM172A	89	97.037	Nomascus_leucogenys
ENSPPRG00000006653	FAM172A	89	89.189	ENSOANG00000011068	FAM172A	97	90.331	Ornithorhynchus_anatinus
ENSPPRG00000006653	FAM172A	97	97.778	ENSOCUG00000007299	FAM172A	96	97.778	Oryctolagus_cuniculus
ENSPPRG00000006653	FAM172A	100	96.875	ENSOGAG00000015189	FAM172A	100	96.875	Otolemur_garnettii
ENSPPRG00000006653	FAM172A	89	95.968	ENSOARG00000016711	FAM172A	85	95.968	Ovis_aries
ENSPPRG00000006653	FAM172A	65	97.407	ENSPPAG00000030542	FAM172A	92	97.407	Pan_paniscus
ENSPPRG00000006653	FAM172A	100	100.000	ENSPTIG00000012681	FAM172A	100	100.000	Panthera_tigris_altaica
ENSPPRG00000006653	FAM172A	65	97.407	ENSPTRG00000017074	FAM172A	92	97.407	Pan_troglodytes
ENSPPRG00000006653	FAM172A	65	97.037	ENSPANG00000011687	FAM172A	92	97.037	Papio_anubis
ENSPPRG00000006653	FAM172A	97	72.906	ENSPKIG00000012314	fam172a	96	83.516	Paramormyrops_kingsleyae
ENSPPRG00000006653	FAM172A	100	95.192	ENSPEMG00000009604	-	100	98.734	Peromyscus_maniculatus_bairdii
ENSPPRG00000006653	FAM172A	100	89.904	ENSPCIG00000028612	FAM172A	97	90.842	Phascolarctos_cinereus
ENSPPRG00000006653	FAM172A	55	98.690	ENSPCOG00000024072	FAM172A	93	98.690	Propithecus_coquereli
ENSPPRG00000006653	FAM172A	65	94.052	ENSRNOG00000013844	Fam172a	99	94.052	Rattus_norvegicus
ENSPPRG00000006653	FAM172A	53	76.233	ENSRBIG00000028680	-	93	76.233	Rhinopithecus_bieti
ENSPPRG00000006653	FAM172A	65	97.037	ENSRROG00000023807	FAM172A	92	97.037	Rhinopithecus_roxellana
ENSPPRG00000006653	FAM172A	100	98.077	ENSSBOG00000019860	FAM172A	100	98.077	Saimiri_boliviensis_boliviensis
ENSPPRG00000006653	FAM172A	100	89.904	ENSSHAG00000013743	FAM172A	97	90.594	Sarcophilus_harrisii
ENSPPRG00000006653	FAM172A	100	86.779	ENSSPUG00000008161	FAM172A	97	88.119	Sphenodon_punctatus
ENSPPRG00000006653	FAM172A	100	99.038	ENSSSCG00000027608	FAM172A	100	99.189	Sus_scrofa
ENSPPRG00000006653	FAM172A	80	47.024	ENSTGUG00000013623	-	100	47.024	Taeniopygia_guttata
ENSPPRG00000006653	FAM172A	91	86.579	ENSTGUG00000000715	FAM172A	100	86.579	Taeniopygia_guttata
ENSPPRG00000006653	FAM172A	78	57.576	ENSTNIG00000009902	fam172a	99	59.639	Tetraodon_nigroviridis
ENSPPRG00000006653	FAM172A	100	95.913	ENSTTRG00000001521	FAM172A	97	96.049	Tursiops_truncatus
ENSPPRG00000006653	FAM172A	100	99.519	ENSUMAG00000005442	FAM172A	100	99.519	Ursus_maritimus
ENSPPRG00000006653	FAM172A	100	97.837	ENSVVUG00000022112	FAM172A	100	97.837	Vulpes_vulpes
ENSPPRG00000006653	FAM172A	98	81.463	ENSXETG00000011592	fam172a	96	81.527	Xenopus_tropicalis
ENSPPRG00000006653	FAM172A	92	43.081	ENSXETG00000033027	-	100	43.490	Xenopus_tropicalis