EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000006702 (Gene tree)
Gene ID: 109264059
Gene Symbol: POLR1A
Alias: -
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 75738 bases
Position: chrKV860272.1:43305678-43381415
Accession: 109264059
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000013474	RNA_pol_Rpb1_5	PF04998.17	5.8e-104	1	1
ENSPPRP00000013474	RNA_pol_Rpb1_4	PF05000.17	4.9e-25	1	1
ENSPPRP00000013474	RNA_pol_Rpb1_2	PF00623.20	3e-70	1	1
ENSPPRP00000013474	RNA_pol_Rpb1_3	PF04983.18	4.8e-37	1	1
ENSPPRP00000013474	RNA_pol_Rpb1_1	PF04997.12	2.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000011566	POLR1A-201	6034	XM_019443894	ENSPPRP00000013474	1718 (aa)	XP_019299439	UPI0009058CEA

Gene Model

Click here to download ENSPPRG00000006702's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000006702's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000006702	POLR1A	55	37.584	ENSPPRG00000002128	POLR3A	65	37.584

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000006702	POLR1A	100	91.570	ENSG00000068654	POLR1A	100	91.919	Homo_sapiens
ENSPPRG00000006702	POLR1A	69	68.098	ENSAPOG00000017945	polr1a	99	68.098	Acanthochromis_polyacanthus
ENSPPRG00000006702	POLR1A	100	95.169	ENSAMEG00000005807	POLR1A	100	95.902	Ailuropoda_melanoleuca
ENSPPRG00000006702	POLR1A	100	63.515	ENSACIG00000022147	polr1a	100	62.993	Amphilophus_citrinellus
ENSPPRG00000006702	POLR1A	100	66.357	ENSAOCG00000017336	polr1a	100	67.624	Amphiprion_ocellaris
ENSPPRG00000006702	POLR1A	100	66.299	ENSAPEG00000016105	polr1a	100	65.493	Amphiprion_percula
ENSPPRG00000006702	POLR1A	100	66.647	ENSATEG00000016773	polr1a	100	66.551	Anabas_testudineus
ENSPPRG00000006702	POLR1A	86	72.807	ENSAPLG00000013871	POLR1A	99	73.153	Anas_platyrhynchos
ENSPPRG00000006702	POLR1A	99	69.693	ENSACAG00000012141	POLR1A	99	69.053	Anolis_carolinensis
ENSPPRG00000006702	POLR1A	100	90.576	ENSANAG00000033927	POLR1A	100	90.867	Aotus_nancymaae
ENSPPRG00000006702	POLR1A	100	62.819	ENSACLG00000020541	polr1a	100	62.001	Astatotilapia_calliptera
ENSPPRG00000006702	POLR1A	100	91.735	ENSBTAG00000006481	POLR1A	100	91.744	Bos_taurus
ENSPPRG00000006702	POLR1A	97	40.147	WBGene00012999	rpoa-1	98	37.985	Caenorhabditis_elegans
ENSPPRG00000006702	POLR1A	100	90.058	ENSCJAG00000019547	POLR1A	100	90.407	Callithrix_jacchus
ENSPPRG00000006702	POLR1A	100	95.285	ENSCAFG00000007613	POLR1A	100	95.285	Canis_familiaris
ENSPPRG00000006702	POLR1A	100	95.067	ENSCAFG00020014752	POLR1A	100	95.067	Canis_lupus_dingo
ENSPPRG00000006702	POLR1A	100	90.139	ENSCHIG00000018204	POLR1A	100	90.081	Capra_hircus
ENSPPRG00000006702	POLR1A	100	88.598	ENSTSYG00000002761	POLR1A	100	88.598	Carlito_syrichta
ENSPPRG00000006702	POLR1A	97	84.657	ENSCAPG00000010132	POLR1A	100	84.510	Cavia_aperea
ENSPPRG00000006702	POLR1A	100	89.128	ENSCPOG00000012350	POLR1A	100	89.128	Cavia_porcellus
ENSPPRG00000006702	POLR1A	100	90.465	ENSCCAG00000019839	POLR1A	100	90.814	Cebus_capucinus
ENSPPRG00000006702	POLR1A	100	91.744	ENSCATG00000029786	POLR1A	100	92.093	Cercocebus_atys
ENSPPRG00000006702	POLR1A	100	89.153	ENSCLAG00000005187	POLR1A	100	89.153	Chinchilla_lanigera
ENSPPRG00000006702	POLR1A	100	91.744	ENSCSAG00000016251	POLR1A	100	92.093	Chlorocebus_sabaeus
ENSPPRG00000006702	POLR1A	99	74.927	ENSCPBG00000001115	POLR1A	99	74.927	Chrysemys_picta_bellii
ENSPPRG00000006702	POLR1A	99	46.829	ENSCSAVG00000007184	-	91	55.211	Ciona_savignyi
ENSPPRG00000006702	POLR1A	100	88.902	ENSCANG00000031785	POLR1A	100	88.902	Colobus_angolensis_palliatus
ENSPPRG00000006702	POLR1A	100	82.793	ENSCGRG00001006651	Polr1a	100	83.130	Cricetulus_griseus_chok1gshd
ENSPPRG00000006702	POLR1A	60	86.254	ENSCGRG00000010834	Polr1a	100	87.016	Cricetulus_griseus_crigri
ENSPPRG00000006702	POLR1A	100	62.137	ENSCSEG00000020190	polr1a	100	62.101	Cynoglossus_semilaevis
ENSPPRG00000006702	POLR1A	100	64.396	ENSCVAG00000020941	polr1a	100	65.180	Cyprinodon_variegatus
ENSPPRG00000006702	POLR1A	100	67.557	ENSDARG00000098375	polr1a	100	67.324	Danio_rerio
ENSPPRG00000006702	POLR1A	100	83.575	ENSDNOG00000010829	POLR1A	100	83.575	Dasypus_novemcinctus
ENSPPRG00000006702	POLR1A	100	88.303	ENSDORG00000008298	Polr1a	100	87.905	Dipodomys_ordii
ENSPPRG00000006702	POLR1A	79	45.029	FBgn0019938	RpI1	99	43.615	Drosophila_melanogaster
ENSPPRG00000006702	POLR1A	72	90.625	ENSETEG00000000412	-	72	90.625	Echinops_telfairi
ENSPPRG00000006702	POLR1A	88	65.891	ENSEBUG00000005667	-	99	48.508	Eptatretus_burgeri
ENSPPRG00000006702	POLR1A	100	94.477	ENSEASG00005001625	POLR1A	100	94.826	Equus_asinus_asinus
ENSPPRG00000006702	POLR1A	100	94.477	ENSECAG00000030510	-	100	96.154	Equus_caballus
ENSPPRG00000006702	POLR1A	100	94.477	ENSECAG00000036306	-	100	96.154	Equus_caballus
ENSPPRG00000006702	POLR1A	100	94.477	ENSECAG00000010092	POLR1A	100	96.154	Equus_caballus
ENSPPRG00000006702	POLR1A	85	94.407	ENSEEUG00000000676	POLR1A	85	94.407	Erinaceus_europaeus
ENSPPRG00000006702	POLR1A	100	67.130	ENSELUG00000012769	polr1a	99	66.995	Esox_lucius
ENSPPRG00000006702	POLR1A	100	99.418	ENSFCAG00000008966	POLR1A	100	99.418	Felis_catus
ENSPPRG00000006702	POLR1A	99	71.814	ENSFALG00000010082	POLR1A	99	71.814	Ficedula_albicollis
ENSPPRG00000006702	POLR1A	100	88.844	ENSFDAG00000013726	POLR1A	100	88.669	Fukomys_damarensis
ENSPPRG00000006702	POLR1A	100	62.065	ENSFHEG00000005996	polr1a	100	61.921	Fundulus_heteroclitus
ENSPPRG00000006702	POLR1A	100	60.326	ENSGMOG00000002230	polr1a	100	60.093	Gadus_morhua
ENSPPRG00000006702	POLR1A	90	70.447	ENSGALG00000038160	-	99	70.577	Gallus_gallus
ENSPPRG00000006702	POLR1A	100	64.574	ENSGAFG00000015266	polr1a	100	64.039	Gambusia_affinis
ENSPPRG00000006702	POLR1A	100	64.971	ENSGACG00000018791	polr1a	100	64.773	Gasterosteus_aculeatus
ENSPPRG00000006702	POLR1A	89	75.990	ENSGAGG00000004984	-	96	81.416	Gopherus_agassizii
ENSPPRG00000006702	POLR1A	100	91.395	ENSGGOG00000001788	POLR1A	100	91.744	Gorilla_gorilla
ENSPPRG00000006702	POLR1A	90	64.785	ENSHBUG00000020021	polr1a	100	64.785	Haplochromis_burtoni
ENSPPRG00000006702	POLR1A	100	89.477	ENSHGLG00000006334	POLR1A	100	89.477	Heterocephalus_glaber_female
ENSPPRG00000006702	POLR1A	100	89.217	ENSHGLG00100006614	POLR1A	100	89.217	Heterocephalus_glaber_male
ENSPPRG00000006702	POLR1A	100	62.227	ENSHCOG00000003345	polr1a	100	62.226	Hippocampus_comes
ENSPPRG00000006702	POLR1A	100	66.300	ENSIPUG00000013174	polr1a	100	65.587	Ictalurus_punctatus
ENSPPRG00000006702	POLR1A	100	87.558	ENSSTOG00000012580	POLR1A	100	87.558	Ictidomys_tridecemlineatus
ENSPPRG00000006702	POLR1A	100	87.812	ENSJJAG00000013113	Polr1a	100	87.812	Jaculus_jaculus
ENSPPRG00000006702	POLR1A	100	65.640	ENSKMAG00000007399	polr1a	100	65.429	Kryptolebias_marmoratus
ENSPPRG00000006702	POLR1A	95	68.864	ENSLBEG00000015401	polr1a	99	68.528	Labrus_bergylta
ENSPPRG00000006702	POLR1A	53	76.413	ENSLACG00000003218	polr1a	100	76.413	Latimeria_chalumnae
ENSPPRG00000006702	POLR1A	100	70.462	ENSLOCG00000010881	polr1a	100	70.445	Lepisosteus_oculatus
ENSPPRG00000006702	POLR1A	100	90.551	ENSLAFG00000014948	POLR1A	100	90.799	Loxodonta_africana
ENSPPRG00000006702	POLR1A	100	91.802	ENSMFAG00000046097	POLR1A	100	92.151	Macaca_fascicularis
ENSPPRG00000006702	POLR1A	100	91.686	ENSMMUG00000015815	POLR1A	100	92.035	Macaca_mulatta
ENSPPRG00000006702	POLR1A	100	91.802	ENSMNEG00000043313	POLR1A	100	92.151	Macaca_nemestrina
ENSPPRG00000006702	POLR1A	100	91.221	ENSMLEG00000042428	POLR1A	100	91.570	Mandrillus_leucophaeus
ENSPPRG00000006702	POLR1A	100	67.054	ENSMAMG00000016565	polr1a	100	66.531	Mastacembelus_armatus
ENSPPRG00000006702	POLR1A	100	66.241	ENSMZEG00005004915	polr1a	100	65.529	Maylandia_zebra
ENSPPRG00000006702	POLR1A	99	69.396	ENSMGAG00000013111	POLR1A	99	69.512	Meleagris_gallopavo
ENSPPRG00000006702	POLR1A	92	87.555	ENSMAUG00000008497	Polr1a	100	87.555	Mesocricetus_auratus
ENSPPRG00000006702	POLR1A	100	91.865	ENSMICG00000000757	POLR1A	100	91.749	Microcebus_murinus
ENSPPRG00000006702	POLR1A	100	87.710	ENSMOCG00000000122	Polr1a	100	87.362	Microtus_ochrogaster
ENSPPRG00000006702	POLR1A	100	65.527	ENSMMOG00000010216	polr1a	100	65.661	Mola_mola
ENSPPRG00000006702	POLR1A	100	75.086	ENSMODG00000009335	POLR1A	100	74.971	Monodelphis_domestica
ENSPPRG00000006702	POLR1A	100	65.777	ENSMALG00000013363	polr1a	100	65.780	Monopterus_albus
ENSPPRG00000006702	POLR1A	100	86.377	MGP_CAROLIEiJ_G0028494	Polr1a	100	86.203	Mus_caroli
ENSPPRG00000006702	POLR1A	100	86.435	ENSMUSG00000049553	Polr1a	100	86.261	Mus_musculus
ENSPPRG00000006702	POLR1A	100	86.957	MGP_PahariEiJ_G0022230	Polr1a	100	86.783	Mus_pahari
ENSPPRG00000006702	POLR1A	100	84.795	MGP_SPRETEiJ_G0029499	Polr1a	100	84.940	Mus_spretus
ENSPPRG00000006702	POLR1A	100	94.878	ENSMPUG00000009135	POLR1A	100	94.878	Mustela_putorius_furo
ENSPPRG00000006702	POLR1A	100	90.967	ENSMLUG00000015723	POLR1A	100	90.967	Myotis_lucifugus
ENSPPRG00000006702	POLR1A	100	88.239	ENSNGAG00000017907	Polr1a	100	87.891	Nannospalax_galili
ENSPPRG00000006702	POLR1A	100	66.415	ENSNBRG00000000519	polr1a	100	66.299	Neolamprologus_brichardi
ENSPPRG00000006702	POLR1A	100	89.525	ENSNLEG00000002264	POLR1A	100	89.699	Nomascus_leucogenys
ENSPPRG00000006702	POLR1A	75	92.126	ENSMEUG00000011665	-	75	92.126	Notamacropus_eugenii
ENSPPRG00000006702	POLR1A	99	83.078	ENSOPRG00000008269	POLR1A	100	82.960	Ochotona_princeps
ENSPPRG00000006702	POLR1A	100	89.309	ENSODEG00000003542	POLR1A	100	89.425	Octodon_degus
ENSPPRG00000006702	POLR1A	100	66.725	ENSONIG00000015895	polr1a	100	66.397	Oreochromis_niloticus
ENSPPRG00000006702	POLR1A	100	90.122	ENSOCUG00000010138	POLR1A	100	90.296	Oryctolagus_cuniculus
ENSPPRG00000006702	POLR1A	100	64.617	ENSORLG00000008753	polr1a	99	64.566	Oryzias_latipes
ENSPPRG00000006702	POLR1A	100	63.926	ENSORLG00020020726	polr1a	99	63.689	Oryzias_latipes_hni
ENSPPRG00000006702	POLR1A	96	74.468	ENSORLG00015016071	polr1a	99	74.444	Oryzias_latipes_hsok
ENSPPRG00000006702	POLR1A	100	90.407	ENSOGAG00000004031	POLR1A	100	90.465	Otolemur_garnettii
ENSPPRG00000006702	POLR1A	100	91.405	ENSOARG00000020601	POLR1A	100	91.246	Ovis_aries
ENSPPRG00000006702	POLR1A	100	91.453	ENSPPAG00000042450	POLR1A	100	91.802	Pan_paniscus
ENSPPRG00000006702	POLR1A	100	99.304	ENSPTIG00000018783	POLR1A	100	99.304	Panthera_tigris_altaica
ENSPPRG00000006702	POLR1A	100	91.163	ENSPTRG00000012147	POLR1A	100	91.744	Pan_troglodytes
ENSPPRG00000006702	POLR1A	100	91.744	ENSPANG00000025908	POLR1A	100	92.093	Papio_anubis
ENSPPRG00000006702	POLR1A	94	75.694	ENSPKIG00000005468	polr1a	99	75.694	Paramormyrops_kingsleyae
ENSPPRG00000006702	POLR1A	63	72.007	ENSPSIG00000009321	-	99	71.481	Pelodiscus_sinensis
ENSPPRG00000006702	POLR1A	54	68.877	ENSPMGG00000009718	polr1a	95	68.877	Periophthalmus_magnuspinnatus
ENSPPRG00000006702	POLR1A	100	87.826	ENSPEMG00000022224	Polr1a	100	88.058	Peromyscus_maniculatus_bairdii
ENSPPRG00000006702	POLR1A	95	79.684	ENSPCIG00000004222	POLR1A	99	79.063	Phascolarctos_cinereus
ENSPPRG00000006702	POLR1A	100	64.928	ENSPFOG00000005025	polr1a	100	64.129	Poecilia_formosa
ENSPPRG00000006702	POLR1A	100	65.157	ENSPLAG00000021389	polr1a	100	64.546	Poecilia_latipinna
ENSPPRG00000006702	POLR1A	100	62.993	ENSPMEG00000006463	polr1a	100	62.486	Poecilia_mexicana
ENSPPRG00000006702	POLR1A	100	65.197	ENSPREG00000002389	polr1a	100	65.197	Poecilia_reticulata
ENSPPRG00000006702	POLR1A	100	90.814	ENSPPYG00000012217	POLR1A	100	91.163	Pongo_abelii
ENSPPRG00000006702	POLR1A	92	92.000	ENSPCAG00000011582	POLR1A	92	92.000	Procavia_capensis
ENSPPRG00000006702	POLR1A	100	91.749	ENSPCOG00000026987	POLR1A	100	91.691	Propithecus_coquereli
ENSPPRG00000006702	POLR1A	95	92.279	ENSPVAG00000012674	POLR1A	95	91.519	Pteropus_vampyrus
ENSPPRG00000006702	POLR1A	100	66.241	ENSPNYG00000000026	polr1a	100	65.529	Pundamilia_nyererei
ENSPPRG00000006702	POLR1A	100	66.532	ENSPNAG00000019223	polr1a	99	68.331	Pygocentrus_nattereri
ENSPPRG00000006702	POLR1A	100	88.058	ENSRNOG00000009545	Polr1a	100	87.884	Rattus_norvegicus
ENSPPRG00000006702	POLR1A	100	91.105	ENSRBIG00000028335	POLR1A	100	91.453	Rhinopithecus_bieti
ENSPPRG00000006702	POLR1A	100	91.047	ENSRROG00000031473	POLR1A	100	91.395	Rhinopithecus_roxellana
ENSPPRG00000006702	POLR1A	99	36.220	YOR341W	RPA190	99	36.471	Saccharomyces_cerevisiae
ENSPPRG00000006702	POLR1A	100	90.128	ENSSBOG00000030262	POLR1A	100	90.476	Saimiri_boliviensis_boliviensis
ENSPPRG00000006702	POLR1A	100	73.860	ENSSHAG00000014739	POLR1A	100	73.860	Sarcophilus_harrisii
ENSPPRG00000006702	POLR1A	100	67.579	ENSSFOG00015019716	polr1a	100	67.423	Scleropages_formosus
ENSPPRG00000006702	POLR1A	100	66.377	ENSSMAG00000014342	polr1a	100	66.204	Scophthalmus_maximus
ENSPPRG00000006702	POLR1A	100	67.652	ENSSDUG00000014631	polr1a	100	67.129	Seriola_dumerili
ENSPPRG00000006702	POLR1A	100	65.797	ENSSLDG00000024095	polr1a	100	65.338	Seriola_lalandi_dorsalis
ENSPPRG00000006702	POLR1A	75	96.809	ENSSARG00000003136	-	76	96.809	Sorex_araneus
ENSPPRG00000006702	POLR1A	94	77.949	ENSSPUG00000004215	POLR1A	98	77.949	Sphenodon_punctatus
ENSPPRG00000006702	POLR1A	65	72.676	ENSSPAG00000016341	polr1a	96	72.676	Stegastes_partitus
ENSPPRG00000006702	POLR1A	83	93.623	ENSSSCG00000008226	POLR1A	99	93.605	Sus_scrofa
ENSPPRG00000006702	POLR1A	99	70.512	ENSTGUG00000010704	POLR1A	100	70.571	Taeniopygia_guttata
ENSPPRG00000006702	POLR1A	100	64.522	ENSTRUG00000002210	polr1a	99	64.423	Takifugu_rubripes
ENSPPRG00000006702	POLR1A	100	60.185	ENSTNIG00000010116	polr1a	100	60.115	Tetraodon_nigroviridis
ENSPPRG00000006702	POLR1A	74	96.460	ENSTBEG00000008646	POLR1A	74	96.460	Tupaia_belangeri
ENSPPRG00000006702	POLR1A	100	88.882	ENSTTRG00000008597	POLR1A	100	88.417	Tursiops_truncatus
ENSPPRG00000006702	POLR1A	69	96.020	ENSUAMG00000012158	-	94	96.020	Ursus_americanus
ENSPPRG00000006702	POLR1A	100	94.936	ENSUMAG00000006700	POLR1A	100	94.936	Ursus_maritimus
ENSPPRG00000006702	POLR1A	100	94.994	ENSVVUG00000001245	POLR1A	100	94.994	Vulpes_vulpes
ENSPPRG00000006702	POLR1A	100	68.379	ENSXETG00000001952	polr1a	100	69.714	Xenopus_tropicalis
ENSPPRG00000006702	POLR1A	100	65.217	ENSXMAG00000004032	polr1a	100	64.686	Xiphophorus_maculatus