EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPPRG00000006747 (Gene tree)
Gene ID
109272103
Gene Symbol
CSDE1
Alias
-
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Panthera_pardus
Status
putative
Strand
Minus strand
Length
40101 bases
Position
chrKV860303.1:19469296-19509396
Accession
109272103
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPPRP00000013494CSDPF00313.226.4e-8515
ENSPPRP00000013494CSDPF00313.226.4e-8525
ENSPPRP00000013494CSDPF00313.226.4e-8535
ENSPPRP00000013494CSDPF00313.226.4e-8545
ENSPPRP00000013494CSDPF00313.226.4e-8555
ENSPPRP00000013504CSDPF00313.228e-8515
ENSPPRP00000013504CSDPF00313.228e-8525
ENSPPRP00000013504CSDPF00313.228e-8535
ENSPPRP00000013504CSDPF00313.228e-8545
ENSPPRP00000013504CSDPF00313.228e-8555
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPPRT00000011596CSDE1-2023256XM_019457926ENSPPRP00000013504844 (aa)XP_019313471UPI00042C137C
ENSPPRT00000011590CSDE1-2013163XM_019457928ENSPPRP00000013494813 (aa)XP_019313473UPI00042C1463
Gene Model
Click here to download ENSPPRG00000006747's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000006747's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPPRG00000006747CSDE110099.289ENSG00000009307CSDE1100100.000Homo_sapiens
ENSPPRG00000006747CSDE19874.296ENSAPOG00000015538csde110077.922Acanthochromis_polyacanthus
ENSPPRG00000006747CSDE110098.526ENSAMEG00000017129CSDE110098.526Ailuropoda_melanoleuca
ENSPPRG00000006747CSDE18677.027ENSACIG00000015175csde110077.027Amphilophus_citrinellus
ENSPPRG00000006747CSDE19874.592ENSAOCG00000011510csde110078.052Amphiprion_ocellaris
ENSPPRG00000006747CSDE19975.801ENSAPEG00000007194csde110078.052Amphiprion_percula
ENSPPRG00000006747CSDE19477.662ENSATEG00000003864csde110077.662Anabas_testudineus
ENSPPRG00000006747CSDE19491.917ENSAPLG00000008797CSDE110091.917Anas_platyrhynchos
ENSPPRG00000006747CSDE19592.105ENSACAG00000003120CSDE110092.105Anolis_carolinensis
ENSPPRG00000006747CSDE110098.934ENSANAG00000024665CSDE110098.934Aotus_nancymaae
ENSPPRG00000006747CSDE18773.050ENSANAG00000028396-9173.810Aotus_nancymaae
ENSPPRG00000006747CSDE19577.250ENSACLG00000013296csde110077.633Astatotilapia_calliptera
ENSPPRG00000006747CSDE19477.302ENSAMXG00000007436csde110077.302Astyanax_mexicanus
ENSPPRG00000006747CSDE110099.052ENSBTAG00000000678CSDE110099.052Bos_taurus
ENSPPRG00000006747CSDE110099.052ENSCJAG00000012565CSDE110099.052Callithrix_jacchus
ENSPPRG00000006747CSDE19899.749ENSCAFG00000009618CSDE110099.749Canis_familiaris
ENSPPRG00000006747CSDE19499.739ENSCAFG00020000481CSDE110099.739Canis_lupus_dingo
ENSPPRG00000006747CSDE110098.934ENSCHIG00000017250CSDE110098.957Capra_hircus
ENSPPRG00000006747CSDE110098.223ENSTSYG00000003747CSDE110098.747Carlito_syrichta
ENSPPRG00000006747CSDE19591.813ENSCAPG00000015128CSDE110091.813Cavia_aperea
ENSPPRG00000006747CSDE19593.734ENSCPOG00000040388CSDE110093.734Cavia_porcellus
ENSPPRG00000006747CSDE19076.733ENSCCAG00000033677-9976.247Cebus_capucinus
ENSPPRG00000006747CSDE110099.052ENSCCAG00000036794CSDE110099.123Cebus_capucinus
ENSPPRG00000006747CSDE19173.942ENSCCAG00000030878-9173.942Cebus_capucinus
ENSPPRG00000006747CSDE110099.289ENSCATG00000036962CSDE110099.289Cercocebus_atys
ENSPPRG00000006747CSDE19599.123ENSCLAG00000006618CSDE110099.123Chinchilla_lanigera
ENSPPRG00000006747CSDE110099.289ENSCSAG00000001658CSDE110099.289Chlorocebus_sabaeus
ENSPPRG00000006747CSDE110099.080ENSCHOG00000000918CSDE19199.080Choloepus_hoffmanni
ENSPPRG00000006747CSDE19592.607ENSCPBG00000016547CSDE110092.607Chrysemys_picta_bellii
ENSPPRG00000006747CSDE19243.276ENSCING00000014465-9643.276Ciona_intestinalis
ENSPPRG00000006747CSDE19142.875ENSCSAVG00000008100-9842.627Ciona_savignyi
ENSPPRG00000006747CSDE110099.171ENSCANG00000035096CSDE110099.171Colobus_angolensis_palliatus
ENSPPRG00000006747CSDE18595.849ENSCANG00000031069-9993.370Colobus_angolensis_palliatus
ENSPPRG00000006747CSDE19481.486ENSCGRG00001014011-10081.486Cricetulus_griseus_chok1gshd
ENSPPRG00000006747CSDE19598.747ENSCGRG00001016833-10098.747Cricetulus_griseus_chok1gshd
ENSPPRG00000006747CSDE19484.783ENSCGRG00000005831-10084.783Cricetulus_griseus_crigri
ENSPPRG00000006747CSDE19198.664ENSCGRG00000002225-10098.664Cricetulus_griseus_crigri
ENSPPRG00000006747CSDE19477.503ENSCSEG00000002620csde110077.503Cynoglossus_semilaevis
ENSPPRG00000006747CSDE19875.627ENSCVAG00000001344csde110077.013Cyprinodon_variegatus
ENSPPRG00000006747CSDE19973.908ENSDARG00000074758csde110077.903Danio_rerio
ENSPPRG00000006747CSDE17570.722ENSDNOG00000034464-10073.043Dasypus_novemcinctus
ENSPPRG00000006747CSDE19598.316ENSDNOG00000010287-9498.316Dasypus_novemcinctus
ENSPPRG00000006747CSDE19598.246ENSDORG00000011609Csde110098.353Dipodomys_ordii
ENSPPRG00000006747CSDE19148.156FBgn0263352Unr7348.795Drosophila_melanogaster
ENSPPRG00000006747CSDE18587.500ENSETEG00000006280-10087.500Echinops_telfairi
ENSPPRG00000006747CSDE19477.285ENSETEG00000013678-9977.285Echinops_telfairi
ENSPPRG00000006747CSDE17468.543ENSETEG00000007109-9968.543Echinops_telfairi
ENSPPRG00000006747CSDE19498.347ENSETEG00000002491-8098.347Echinops_telfairi
ENSPPRG00000006747CSDE19455.897ENSEBUG00000008647csde19954.167Eptatretus_burgeri
ENSPPRG00000006747CSDE110098.647ENSEASG00005006284CSDE110099.499Equus_asinus_asinus
ENSPPRG00000006747CSDE110098.647ENSECAG00000020885CSDE110099.499Equus_caballus
ENSPPRG00000006747CSDE19399.476ENSEEUG00000006286CSDE17499.476Erinaceus_europaeus
ENSPPRG00000006747CSDE19872.854ENSELUG00000015507csde110076.067Esox_lucius
ENSPPRG00000006747CSDE1100100.000ENSFCAG00000029266CSDE1100100.000Felis_catus
ENSPPRG00000006747CSDE19591.980ENSFALG00000003407CSDE110091.980Ficedula_albicollis
ENSPPRG00000006747CSDE19598.872ENSFDAG00000007882CSDE110098.952Fukomys_damarensis
ENSPPRG00000006747CSDE19875.208ENSFHEG00000010799csde110077.029Fundulus_heteroclitus
ENSPPRG00000006747CSDE19477.096ENSGMOG00000012731csde110077.096Gadus_morhua
ENSPPRG00000006747CSDE19392.199ENSGALG00000002139CSDE19892.199Gallus_gallus
ENSPPRG00000006747CSDE18776.677ENSGAFG00000005241csde19576.677Gambusia_affinis
ENSPPRG00000006747CSDE19477.875ENSGACG00000004544csde110077.875Gasterosteus_aculeatus
ENSPPRG00000006747CSDE110090.769ENSGAGG00000017685CSDE110092.231Gopherus_agassizii
ENSPPRG00000006747CSDE110099.289ENSGGOG00000002164CSDE110099.348Gorilla_gorilla
ENSPPRG00000006747CSDE19875.357ENSHBUG00000020315csde110077.633Haplochromis_burtoni
ENSPPRG00000006747CSDE19582.456ENSHGLG00000019549-10082.456Heterocephalus_glaber_female
ENSPPRG00000006747CSDE19489.521ENSHGLG00000008555-10089.521Heterocephalus_glaber_female
ENSPPRG00000006747CSDE19589.474ENSHGLG00000009620-10089.724Heterocephalus_glaber_female
ENSPPRG00000006747CSDE19190.200ENSHGLG00000010039-10090.200Heterocephalus_glaber_female
ENSPPRG00000006747CSDE19489.439ENSHGLG00000003829-10089.439Heterocephalus_glaber_female
ENSPPRG00000006747CSDE19480.427ENSHGLG00000000650-9980.427Heterocephalus_glaber_female
ENSPPRG00000006747CSDE19485.414ENSHGLG00000007471-9885.414Heterocephalus_glaber_female
ENSPPRG00000006747CSDE19182.405ENSHGLG00100004833-10082.405Heterocephalus_glaber_male
ENSPPRG00000006747CSDE19482.786ENSHGLG00100007287-9882.786Heterocephalus_glaber_male
ENSPPRG00000006747CSDE19599.123ENSHGLG00100019438-10099.123Heterocephalus_glaber_male
ENSPPRG00000006747CSDE19189.978ENSHGLG00100006910-10089.978Heterocephalus_glaber_male
ENSPPRG00000006747CSDE18884.240ENSHGLG00100004195-10084.240Heterocephalus_glaber_male
ENSPPRG00000006747CSDE19480.339ENSHGLG00100001846-10080.339Heterocephalus_glaber_male
ENSPPRG00000006747CSDE19484.746ENSHGLG00100012072-10084.746Heterocephalus_glaber_male
ENSPPRG00000006747CSDE19484.731ENSHGLG00100002245-9984.731Heterocephalus_glaber_male
ENSPPRG00000006747CSDE19875.633ENSHCOG00000004158csde110076.593Hippocampus_comes
ENSPPRG00000006747CSDE19477.043ENSIPUG00000000355csde110077.043Ictalurus_punctatus
ENSPPRG00000006747CSDE18781.290ENSSTOG00000032722-9882.460Ictidomys_tridecemlineatus
ENSPPRG00000006747CSDE19580.025ENSSTOG00000030994-10080.563Ictidomys_tridecemlineatus
ENSPPRG00000006747CSDE19598.496ENSJJAG00000019571Csde110098.503Jaculus_jaculus
ENSPPRG00000006747CSDE19875.505ENSKMAG00000005685csde110076.514Kryptolebias_marmoratus
ENSPPRG00000006747CSDE19874.178ENSLBEG00000014770csde110077.792Labrus_bergylta
ENSPPRG00000006747CSDE19779.323ENSLACG00000018452CSDE19679.537Latimeria_chalumnae
ENSPPRG00000006747CSDE110078.052ENSLOCG00000010413csde19680.320Lepisosteus_oculatus
ENSPPRG00000006747CSDE19597.406ENSLAFG00000007150CSDE19697.406Loxodonta_africana
ENSPPRG00000006747CSDE110099.289ENSMFAG00000003674CSDE110099.348Macaca_fascicularis
ENSPPRG00000006747CSDE110099.289ENSMMUG00000001974CSDE110099.348Macaca_mulatta
ENSPPRG00000006747CSDE110099.289ENSMNEG00000045247CSDE110099.289Macaca_nemestrina
ENSPPRG00000006747CSDE110099.052ENSMLEG00000038673CSDE110099.052Mandrillus_leucophaeus
ENSPPRG00000006747CSDE19875.000ENSMAMG00000008821csde110078.571Mastacembelus_armatus
ENSPPRG00000006747CSDE19875.957ENSMZEG00005021675csde110077.633Maylandia_zebra
ENSPPRG00000006747CSDE19491.667ENSMGAG00000016381CSDE110091.667Meleagris_gallopavo
ENSPPRG00000006747CSDE19598.747ENSMAUG00000014031Csde110098.802Mesocricetus_auratus
ENSPPRG00000006747CSDE110098.647ENSMICG00000002050CSDE110098.647Microcebus_murinus
ENSPPRG00000006747CSDE19598.747ENSMOCG00000018960Csde110098.747Microtus_ochrogaster
ENSPPRG00000006747CSDE19477.922ENSMMOG00000015075csde110077.922Mola_mola
ENSPPRG00000006747CSDE19596.115ENSMODG00000004685CSDE110096.115Monodelphis_domestica
ENSPPRG00000006747CSDE19478.052ENSMALG00000007132csde110078.052Monopterus_albus
ENSPPRG00000006747CSDE19598.496MGP_CAROLIEiJ_G0025444Csde110098.496Mus_caroli
ENSPPRG00000006747CSDE19598.622ENSMUSG00000068823Csde110098.653Mus_musculus
ENSPPRG00000006747CSDE19598.872MGP_PahariEiJ_G0026888Csde110098.872Mus_pahari
ENSPPRG00000006747CSDE19598.872MGP_SPRETEiJ_G0026394Csde110098.872Mus_spretus
ENSPPRG00000006747CSDE193100.000ENSMPUG00000005753CSDE199100.000Mustela_putorius_furo
ENSPPRG00000006747CSDE110098.155ENSMLUG00000005681CSDE110098.155Myotis_lucifugus
ENSPPRG00000006747CSDE19598.622ENSNGAG00000021929Csde110098.653Nannospalax_galili
ENSPPRG00000006747CSDE19171.269ENSNGAG00000012599-10071.269Nannospalax_galili
ENSPPRG00000006747CSDE19477.633ENSNBRG00000020808csde110077.633Neolamprologus_brichardi
ENSPPRG00000006747CSDE110099.171ENSNLEG00000004842CSDE110099.171Nomascus_leucogenys
ENSPPRG00000006747CSDE19397.087ENSMEUG00000002677CSDE19697.087Notamacropus_eugenii
ENSPPRG00000006747CSDE19897.315ENSOPRG00000005002CSDE18894.444Ochotona_princeps
ENSPPRG00000006747CSDE19167.920ENSODEG00000005979-9867.920Octodon_degus
ENSPPRG00000006747CSDE19598.496ENSODEG00000007383-10098.653Octodon_degus
ENSPPRG00000006747CSDE19575.458ENSONIG00000009309csde110075.458Oreochromis_niloticus
ENSPPRG00000006747CSDE19580.050ENSOANG00000003346-10080.050Ornithorhynchus_anatinus
ENSPPRG00000006747CSDE110098.460ENSOCUG00000016438CSDE110098.460Oryctolagus_cuniculus
ENSPPRG00000006747CSDE19477.763ENSORLG00000000707csde110077.763Oryzias_latipes
ENSPPRG00000006747CSDE19875.481ENSORLG00020005148csde110075.458Oryzias_latipes_hni
ENSPPRG00000006747CSDE19875.481ENSORLG00015019415csde110077.763Oryzias_latipes_hsok
ENSPPRG00000006747CSDE19876.110ENSOMEG00000015656csde110078.442Oryzias_melastigma
ENSPPRG00000006747CSDE110099.139ENSOGAG00000012127CSDE110099.139Otolemur_garnettii
ENSPPRG00000006747CSDE110099.016ENSOARG00000020034CSDE110099.016Ovis_aries
ENSPPRG00000006747CSDE110099.289ENSPPAG00000025861CSDE110099.348Pan_paniscus
ENSPPRG00000006747CSDE1100100.000ENSPTIG00000015468CSDE1100100.000Panthera_tigris_altaica
ENSPPRG00000006747CSDE110099.171ENSPTRG00000033721CSDE110099.373Pan_troglodytes
ENSPPRG00000006747CSDE110099.289ENSPANG00000018873CSDE110099.348Papio_anubis
ENSPPRG00000006747CSDE19477.373ENSPKIG00000009459csde110077.373Paramormyrops_kingsleyae
ENSPPRG00000006747CSDE19195.575ENSPSIG00000003823CSDE19695.575Pelodiscus_sinensis
ENSPPRG00000006747CSDE19477.532ENSPMGG00000000772csde110077.532Periophthalmus_magnuspinnatus
ENSPPRG00000006747CSDE19598.747ENSPEMG00000020357-10098.802Peromyscus_maniculatus_bairdii
ENSPPRG00000006747CSDE110094.333ENSPCIG00000022587CSDE110096.241Phascolarctos_cinereus
ENSPPRG00000006747CSDE19475.466ENSPFOG00000012664csde110075.932Poecilia_formosa
ENSPPRG00000006747CSDE19271.429ENSPLAG00000017680csde19371.429Poecilia_latipinna
ENSPPRG00000006747CSDE19371.320ENSPMEG00000005094csde19671.320Poecilia_mexicana
ENSPPRG00000006747CSDE19875.030ENSPREG00000011631csde110074.190Poecilia_reticulata
ENSPPRG00000006747CSDE19599.248ENSPPYG00000000996CSDE110099.248Pongo_abelii
ENSPPRG00000006747CSDE110098.574ENSPCAG00000014368CSDE19698.574Procavia_capensis
ENSPPRG00000006747CSDE18583.955ENSPCOG00000008223-9282.482Propithecus_coquereli
ENSPPRG00000006747CSDE110099.179ENSPCOG00000017893CSDE110099.348Propithecus_coquereli
ENSPPRG00000006747CSDE110092.989ENSPVAG00000008225CSDE110092.989Pteropus_vampyrus
ENSPPRG00000006747CSDE19875.357ENSPNYG00000013745csde110077.633Pundamilia_nyererei
ENSPPRG00000006747CSDE19876.265ENSPNAG00000001958csde110077.792Pygocentrus_nattereri
ENSPPRG00000006747CSDE19598.747ENSRNOG00000061058Csde110098.747Rattus_norvegicus
ENSPPRG00000006747CSDE110093.865ENSRBIG00000038966-10093.865Rhinopithecus_bieti
ENSPPRG00000006747CSDE19595.137ENSRBIG00000038088-9997.696Rhinopithecus_bieti
ENSPPRG00000006747CSDE110099.289ENSRROG00000043101CSDE110099.289Rhinopithecus_roxellana
ENSPPRG00000006747CSDE110099.052ENSSBOG00000035592CSDE110099.052Saimiri_boliviensis_boliviensis
ENSPPRG00000006747CSDE110093.995ENSSHAG00000009831CSDE110095.958Sarcophilus_harrisii
ENSPPRG00000006747CSDE19875.689ENSSFOG00015007498csde110077.143Scleropages_formosus
ENSPPRG00000006747CSDE19974.421ENSSMAG00000007203csde110078.442Scophthalmus_maximus
ENSPPRG00000006747CSDE19874.296ENSSDUG00000015380csde110077.922Seriola_dumerili
ENSPPRG00000006747CSDE19876.506ENSSLDG00000008819csde110077.922Seriola_lalandi_dorsalis
ENSPPRG00000006747CSDE110097.052ENSSARG00000000738CSDE110097.052Sorex_araneus
ENSPPRG00000006747CSDE110090.888ENSSPUG00000008714CSDE110091.980Sphenodon_punctatus
ENSPPRG00000006747CSDE19975.801ENSSPAG00000000716csde110077.792Stegastes_partitus
ENSPPRG00000006747CSDE110099.408ENSSSCG00000006752CSDE110099.478Sus_scrofa
ENSPPRG00000006747CSDE19591.000ENSTGUG00000000972CSDE110091.000Taeniopygia_guttata
ENSPPRG00000006747CSDE19474.772ENSTRUG00000007996csde110074.772Takifugu_rubripes
ENSPPRG00000006747CSDE18881.369ENSTNIG00000010878csde110081.369Tetraodon_nigroviridis
ENSPPRG00000006747CSDE19398.718ENSTBEG00000011880-6798.718Tupaia_belangeri
ENSPPRG00000006747CSDE110098.647ENSTTRG00000015583CSDE110098.647Tursiops_truncatus
ENSPPRG00000006747CSDE184100.000ENSUAMG00000021779-10099.357Ursus_americanus
ENSPPRG00000006747CSDE18495.330ENSUAMG00000024289-9995.330Ursus_americanus
ENSPPRG00000006747CSDE19889.698ENSUMAG00000009720-9891.829Ursus_maritimus
ENSPPRG00000006747CSDE192100.000ENSUMAG00000011714-99100.000Ursus_maritimus
ENSPPRG00000006747CSDE110098.592ENSVPAG00000000749CSDE18598.592Vicugna_pacos
ENSPPRG00000006747CSDE18699.708ENSVVUG00000009890CSDE19499.708Vulpes_vulpes
ENSPPRG00000006747CSDE19585.893ENSXETG00000021448csde110085.893Xenopus_tropicalis
ENSPPRG00000006747CSDE18785.455ENSXCOG00000000035csde18585.455Xiphophorus_couchianus
ENSPPRG00000006747CSDE19976.095ENSXMAG00000009080csde19877.984Xiphophorus_maculatus

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