EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000007002 (Gene tree)
Gene ID: 109250377
Gene Symbol: PRDM10
Alias: -
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 107408 bases
Position: chrKV860357.1:4199797-4307204
Accession: 109250377
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000013748	zf-C2H2	PF00096.26	3.4e-33	1	5
ENSPPRP00000013748	zf-C2H2	PF00096.26	3.4e-33	2	5
ENSPPRP00000013748	zf-C2H2	PF00096.26	3.4e-33	3	5
ENSPPRP00000013748	zf-C2H2	PF00096.26	3.4e-33	4	5
ENSPPRP00000013748	zf-C2H2	PF00096.26	3.4e-33	5	5
ENSPPRP00000013728	zf-C2H2	PF00096.26	3.5e-33	1	5
ENSPPRP00000013728	zf-C2H2	PF00096.26	3.5e-33	2	5
ENSPPRP00000013728	zf-C2H2	PF00096.26	3.5e-33	3	5
ENSPPRP00000013728	zf-C2H2	PF00096.26	3.5e-33	4	5
ENSPPRP00000013728	zf-C2H2	PF00096.26	3.5e-33	5	5
ENSPPRP00000013748	zf-met	PF12874.7	6.1e-06	1	2
ENSPPRP00000013748	zf-met	PF12874.7	6.1e-06	2	2
ENSPPRP00000013728	zf-met	PF12874.7	6.2e-06	1	2
ENSPPRP00000013728	zf-met	PF12874.7	6.2e-06	2	2
ENSPPRP00000013748	zf-C2H2_jaz	PF12171.8	1.7e-16	1	1
ENSPPRP00000013728	zf-C2H2_jaz	PF12171.8	1.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000011851	PRDM10-202	6488	XM_019421415	ENSPPRP00000013748	1152 (aa)	XP_019276960	UPI000904D97F
ENSPPRT00000011837	PRDM10-201	3471	XM_019421414	ENSPPRP00000013728	1156 (aa)	XP_019276959	UPI00090558EE

Gene Model

Click here to download ENSPPRG00000007002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000007002's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000007002	PRDM10	56	31.892	ENSPPRG00000001020	PRDM5	99	35.714
ENSPPRG00000007002	PRDM10	59	37.500	ENSPPRG00000012906	ZNF236	69	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000007002	PRDM10	100	94.569	ENSG00000170325	PRDM10	100	94.569	Homo_sapiens
ENSPPRG00000007002	PRDM10	100	93.886	ENSAMEG00000002425	PRDM10	100	93.886	Ailuropoda_melanoleuca
ENSPPRG00000007002	PRDM10	100	84.814	ENSAPLG00000004858	PRDM10	100	84.987	Anas_platyrhynchos
ENSPPRG00000007002	PRDM10	100	87.287	ENSANAG00000022064	PRDM10	100	80.759	Aotus_nancymaae
ENSPPRG00000007002	PRDM10	100	94.896	ENSBTAG00000019001	PRDM10	100	94.550	Bos_taurus
ENSPPRG00000007002	PRDM10	100	94.737	ENSCJAG00000009235	PRDM10	100	94.737	Callithrix_jacchus
ENSPPRG00000007002	PRDM10	100	95.660	ENSCAFG00000010164	PRDM10	100	95.660	Canis_familiaris
ENSPPRG00000007002	PRDM10	100	94.459	ENSCAFG00020010152	PRDM10	100	94.459	Canis_lupus_dingo
ENSPPRG00000007002	PRDM10	100	94.965	ENSCHIG00000026530	PRDM10	100	94.618	Capra_hircus
ENSPPRG00000007002	PRDM10	100	95.172	ENSTSYG00000000544	PRDM10	100	95.172	Carlito_syrichta
ENSPPRG00000007002	PRDM10	100	85.849	ENSCAPG00000017296	PRDM10	97	91.379	Cavia_aperea
ENSPPRG00000007002	PRDM10	92	86.395	ENSCPOG00000000389	PRDM10	97	86.395	Cavia_porcellus
ENSPPRG00000007002	PRDM10	100	94.478	ENSCCAG00000024567	PRDM10	100	94.737	Cebus_capucinus
ENSPPRG00000007002	PRDM10	100	95.234	ENSCATG00000040031	PRDM10	100	95.234	Cercocebus_atys
ENSPPRG00000007002	PRDM10	100	90.746	ENSCLAG00000014605	PRDM10	99	97.403	Chinchilla_lanigera
ENSPPRG00000007002	PRDM10	100	95.147	ENSCSAG00000002202	PRDM10	100	95.581	Chlorocebus_sabaeus
ENSPPRG00000007002	PRDM10	100	82.793	ENSCPBG00000026880	PRDM10	99	82.627	Chrysemys_picta_bellii
ENSPPRG00000007002	PRDM10	100	94.823	ENSCANG00000032669	PRDM10	100	95.082	Colobus_angolensis_palliatus
ENSPPRG00000007002	PRDM10	100	91.696	ENSCGRG00001021647	Prdm10	98	91.696	Cricetulus_griseus_chok1gshd
ENSPPRG00000007002	PRDM10	100	91.696	ENSCGRG00000006562	Prdm10	98	91.696	Cricetulus_griseus_crigri
ENSPPRG00000007002	PRDM10	82	94.409	ENSDNOG00000001366	PRDM10	95	94.409	Dasypus_novemcinctus
ENSPPRG00000007002	PRDM10	100	93.408	ENSDORG00000014292	Prdm10	100	93.408	Dipodomys_ordii
ENSPPRG00000007002	PRDM10	100	96.441	ENSEASG00005022914	PRDM10	100	96.441	Equus_asinus_asinus
ENSPPRG00000007002	PRDM10	100	96.354	ENSECAG00000011499	PRDM10	100	96.354	Equus_caballus
ENSPPRG00000007002	PRDM10	98	99.912	ENSFCAG00000004111	PRDM10	96	99.912	Felis_catus
ENSPPRG00000007002	PRDM10	100	81.537	ENSFALG00000004873	PRDM10	100	80.952	Ficedula_albicollis
ENSPPRG00000007002	PRDM10	100	90.102	ENSFDAG00000017311	PRDM10	97	93.671	Fukomys_damarensis
ENSPPRG00000007002	PRDM10	100	82.068	ENSGALG00000033660	PRDM10	99	85.637	Gallus_gallus
ENSPPRG00000007002	PRDM10	92	66.667	ENSGACG00000012293	prdm10	99	66.667	Gasterosteus_aculeatus
ENSPPRG00000007002	PRDM10	100	84.450	ENSGAGG00000012523	PRDM10	99	84.278	Gopherus_agassizii
ENSPPRG00000007002	PRDM10	100	95.004	ENSGGOG00000015359	PRDM10	100	95.004	Gorilla_gorilla
ENSPPRG00000007002	PRDM10	100	90.375	ENSHGLG00000001106	PRDM10	100	90.545	Heterocephalus_glaber_female
ENSPPRG00000007002	PRDM10	100	90.785	ENSHGLG00100002350	PRDM10	100	90.700	Heterocephalus_glaber_male
ENSPPRG00000007002	PRDM10	100	94.459	ENSSTOG00000002015	PRDM10	100	94.719	Ictidomys_tridecemlineatus
ENSPPRG00000007002	PRDM10	82	92.340	ENSJJAG00000021493	Prdm10	90	91.770	Jaculus_jaculus
ENSPPRG00000007002	PRDM10	100	91.230	ENSLAFG00000031867	PRDM10	100	91.230	Loxodonta_africana
ENSPPRG00000007002	PRDM10	100	95.164	ENSMFAG00000031008	PRDM10	100	95.164	Macaca_fascicularis
ENSPPRG00000007002	PRDM10	100	95.164	ENSMMUG00000017555	PRDM10	100	95.164	Macaca_mulatta
ENSPPRG00000007002	PRDM10	100	95.078	ENSMNEG00000036493	PRDM10	100	95.078	Macaca_nemestrina
ENSPPRG00000007002	PRDM10	94	96.078	ENSMLEG00000042028	PRDM10	99	97.468	Mandrillus_leucophaeus
ENSPPRG00000007002	PRDM10	100	82.274	ENSMGAG00000001112	PRDM10	100	82.274	Meleagris_gallopavo
ENSPPRG00000007002	PRDM10	100	95.078	ENSMICG00000013888	PRDM10	100	95.078	Microcebus_murinus
ENSPPRG00000007002	PRDM10	100	90.262	ENSMOCG00000021853	Prdm10	99	95.890	Microtus_ochrogaster
ENSPPRG00000007002	PRDM10	75	87.287	ENSMODG00000004979	PRDM10	99	88.435	Monodelphis_domestica
ENSPPRG00000007002	PRDM10	100	90.008	ENSMUSG00000042496	Prdm10	100	90.008	Mus_musculus
ENSPPRG00000007002	PRDM10	100	91.890	MGP_SPRETEiJ_G0033061	-	100	91.890	Mus_spretus
ENSPPRG00000007002	PRDM10	100	97.309	ENSMPUG00000008711	PRDM10	99	97.309	Mustela_putorius_furo
ENSPPRG00000007002	PRDM10	100	94.118	ENSMLUG00000013051	PRDM10	100	94.204	Myotis_lucifugus
ENSPPRG00000007002	PRDM10	100	93.669	ENSNGAG00000000580	Prdm10	100	93.669	Nannospalax_galili
ENSPPRG00000007002	PRDM10	100	95.250	ENSNLEG00000007488	PRDM10	100	95.250	Nomascus_leucogenys
ENSPPRG00000007002	PRDM10	100	89.805	ENSODEG00000005309	PRDM10	99	94.805	Octodon_degus
ENSPPRG00000007002	PRDM10	100	80.631	ENSOANG00000000577	-	100	79.608	Ornithorhynchus_anatinus
ENSPPRG00000007002	PRDM10	100	92.628	ENSOCUG00000003736	PRDM10	100	92.628	Oryctolagus_cuniculus
ENSPPRG00000007002	PRDM10	100	93.610	ENSOGAG00000010723	PRDM10	100	93.610	Otolemur_garnettii
ENSPPRG00000007002	PRDM10	100	95.139	ENSOARG00000014507	PRDM10	100	94.792	Ovis_aries
ENSPPRG00000007002	PRDM10	100	94.918	ENSPPAG00000042881	PRDM10	100	94.918	Pan_paniscus
ENSPPRG00000007002	PRDM10	100	99.913	ENSPTIG00000013331	PRDM10	100	99.913	Panthera_tigris_altaica
ENSPPRG00000007002	PRDM10	100	95.004	ENSPTRG00000004477	PRDM10	100	95.004	Pan_troglodytes
ENSPPRG00000007002	PRDM10	100	95.164	ENSPANG00000017470	PRDM10	100	95.164	Papio_anubis
ENSPPRG00000007002	PRDM10	100	90.638	ENSPEMG00000014985	Prdm10	100	90.638	Peromyscus_maniculatus_bairdii
ENSPPRG00000007002	PRDM10	100	94.983	ENSPPYG00000004061	PRDM10	100	94.983	Pongo_abelii
ENSPPRG00000007002	PRDM10	92	84.716	ENSPCAG00000014514	PRDM10	100	84.687	Procavia_capensis
ENSPPRG00000007002	PRDM10	100	80.792	ENSPCOG00000023406	PRDM10	100	81.223	Propithecus_coquereli
ENSPPRG00000007002	PRDM10	100	96.367	ENSPVAG00000012764	PRDM10	100	96.367	Pteropus_vampyrus
ENSPPRG00000007002	PRDM10	100	91.775	ENSRNOG00000007853	Prdm10	100	91.775	Rattus_norvegicus
ENSPPRG00000007002	PRDM10	100	94.914	ENSRBIG00000030924	PRDM10	100	94.914	Rhinopithecus_bieti
ENSPPRG00000007002	PRDM10	100	94.914	ENSRROG00000034334	PRDM10	100	94.914	Rhinopithecus_roxellana
ENSPPRG00000007002	PRDM10	100	94.741	ENSSBOG00000008773	PRDM10	100	94.741	Saimiri_boliviensis_boliviensis
ENSPPRG00000007002	PRDM10	99	87.414	ENSSHAG00000004503	PRDM10	99	88.114	Sarcophilus_harrisii
ENSPPRG00000007002	PRDM10	67	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSPPRG00000007002	PRDM10	100	80.981	ENSSPUG00000001178	PRDM10	97	84.977	Sphenodon_punctatus
ENSPPRG00000007002	PRDM10	100	94.204	ENSSSCG00000015243	PRDM10	100	94.571	Sus_scrofa
ENSPPRG00000007002	PRDM10	100	84.079	ENSTGUG00000000530	PRDM10	100	84.079	Taeniopygia_guttata
ENSPPRG00000007002	PRDM10	95	94.027	ENSTBEG00000007221	PRDM10	94	94.027	Tupaia_belangeri
ENSPPRG00000007002	PRDM10	100	92.907	ENSTTRG00000009189	PRDM10	100	92.215	Tursiops_truncatus
ENSPPRG00000007002	PRDM10	91	95.685	ENSUAMG00000018832	PRDM10	97	95.431	Ursus_americanus
ENSPPRG00000007002	PRDM10	100	95.111	ENSUMAG00000003167	PRDM10	99	97.630	Ursus_maritimus
ENSPPRG00000007002	PRDM10	100	96.962	ENSVVUG00000019878	PRDM10	100	96.962	Vulpes_vulpes
ENSPPRG00000007002	PRDM10	100	69.064	ENSXETG00000032173	PRDM10	100	69.064	Xenopus_tropicalis