EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000007096 (Gene tree)
Gene ID: 109272941
Gene Symbol: TRUB1
Alias: -
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 38266 bases
Position: chrKV860305.1:17278192-17316457
Accession: 109272941
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000014114	TruB_N	PF01509.18	4.9e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000012229	TRUB1-201	3445	XM_019459543	ENSPPRP00000014114	349 (aa)	XP_019315088	UPI00090569ED

Gene Model

Click here to download ENSPPRG00000007096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000007096's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000007096	TRUB1	72	30.928	ENSPPRG00000006307	TRUB2	90	30.928

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000007096	TRUB1	99	92.816	ENSG00000165832	TRUB1	96	93.134	Homo_sapiens
ENSPPRG00000007096	TRUB1	70	68.980	ENSAPOG00000020565	trub1	89	68.699	Acanthochromis_polyacanthus
ENSPPRG00000007096	TRUB1	97	93.805	ENSAMEG00000014931	TRUB1	96	93.805	Ailuropoda_melanoleuca
ENSPPRG00000007096	TRUB1	81	57.394	ENSACIG00000003060	trub1	94	57.394	Amphilophus_citrinellus
ENSPPRG00000007096	TRUB1	70	68.980	ENSAOCG00000017188	trub1	89	68.699	Amphiprion_ocellaris
ENSPPRG00000007096	TRUB1	70	68.293	ENSAPEG00000015209	trub1	93	66.148	Amphiprion_percula
ENSPPRG00000007096	TRUB1	69	68.880	ENSATEG00000023291	trub1	86	68.880	Anabas_testudineus
ENSPPRG00000007096	TRUB1	79	76.000	ENSAPLG00000006808	TRUB1	99	76.000	Anas_platyrhynchos
ENSPPRG00000007096	TRUB1	78	71.062	ENSACAG00000009282	TRUB1	99	71.062	Anolis_carolinensis
ENSPPRG00000007096	TRUB1	96	93.413	ENSANAG00000022870	TRUB1	95	93.433	Aotus_nancymaae
ENSPPRG00000007096	TRUB1	72	67.063	ENSACLG00000000823	trub1	91	67.063	Astatotilapia_calliptera
ENSPPRG00000007096	TRUB1	75	67.050	ENSAMXG00000015845	trub1	87	67.050	Astyanax_mexicanus
ENSPPRG00000007096	TRUB1	98	92.962	ENSBTAG00000012955	TRUB1	95	93.731	Bos_taurus
ENSPPRG00000007096	TRUB1	99	91.977	ENSCJAG00000047815	TRUB1	95	93.134	Callithrix_jacchus
ENSPPRG00000007096	TRUB1	99	94.253	ENSCAFG00000011688	TRUB1	96	94.627	Canis_familiaris
ENSPPRG00000007096	TRUB1	99	94.540	ENSCAFG00020013237	TRUB1	96	94.925	Canis_lupus_dingo
ENSPPRG00000007096	TRUB1	98	92.375	ENSCHIG00000020884	TRUB1	94	94.242	Capra_hircus
ENSPPRG00000007096	TRUB1	99	90.831	ENSTSYG00000000446	TRUB1	85	94.667	Carlito_syrichta
ENSPPRG00000007096	TRUB1	72	84.127	ENSCAPG00000017088	TRUB1	99	84.127	Cavia_aperea
ENSPPRG00000007096	TRUB1	71	79.352	ENSCPOG00000030129	-	76	91.795	Cavia_porcellus
ENSPPRG00000007096	TRUB1	70	84.016	ENSCPOG00000040236	-	95	84.914	Cavia_porcellus
ENSPPRG00000007096	TRUB1	96	92.836	ENSCCAG00000028842	TRUB1	95	92.836	Cebus_capucinus
ENSPPRG00000007096	TRUB1	99	91.667	ENSCATG00000033431	TRUB1	96	92.239	Cercocebus_atys
ENSPPRG00000007096	TRUB1	70	87.295	ENSCLAG00000008664	TRUB1	95	87.931	Chinchilla_lanigera
ENSPPRG00000007096	TRUB1	99	91.954	ENSCSAG00000004891	TRUB1	96	92.537	Chlorocebus_sabaeus
ENSPPRG00000007096	TRUB1	99	78.324	ENSCHOG00000011931	TRUB1	95	78.378	Choloepus_hoffmanni
ENSPPRG00000007096	TRUB1	78	79.412	ENSCPBG00000003051	TRUB1	94	79.412	Chrysemys_picta_bellii
ENSPPRG00000007096	TRUB1	99	91.954	ENSCANG00000029445	TRUB1	96	92.537	Colobus_angolensis_palliatus
ENSPPRG00000007096	TRUB1	72	87.747	ENSCGRG00001016772	-	90	79.392	Cricetulus_griseus_chok1gshd
ENSPPRG00000007096	TRUB1	80	79.928	ENSCGRG00001010322	-	79	79.932	Cricetulus_griseus_chok1gshd
ENSPPRG00000007096	TRUB1	80	88.889	ENSCGRG00000010806	Trub1	91	88.176	Cricetulus_griseus_crigri
ENSPPRG00000007096	TRUB1	73	62.500	ENSCSEG00000011261	trub1	98	56.623	Cynoglossus_semilaevis
ENSPPRG00000007096	TRUB1	70	68.163	ENSCVAG00000008791	trub1	78	66.667	Cyprinodon_variegatus
ENSPPRG00000007096	TRUB1	75	67.300	ENSDARG00000053805	trub1	90	67.300	Danio_rerio
ENSPPRG00000007096	TRUB1	97	87.574	ENSDNOG00000001069	TRUB1	95	88.024	Dasypus_novemcinctus
ENSPPRG00000007096	TRUB1	99	87.931	ENSDORG00000010431	Trub1	87	93.333	Dipodomys_ordii
ENSPPRG00000007096	TRUB1	81	77.451	ENSETEG00000009183	TRUB1	66	85.906	Echinops_telfairi
ENSPPRG00000007096	TRUB1	96	94.328	ENSEASG00005014739	TRUB1	96	94.328	Equus_asinus_asinus
ENSPPRG00000007096	TRUB1	96	94.328	ENSECAG00000007177	TRUB1	96	94.328	Equus_caballus
ENSPPRG00000007096	TRUB1	99	76.751	ENSEEUG00000013993	TRUB1	83	82.550	Erinaceus_europaeus
ENSPPRG00000007096	TRUB1	70	69.388	ENSELUG00000000502	trub1	86	69.388	Esox_lucius
ENSPPRG00000007096	TRUB1	100	98.854	ENSFCAG00000031927	TRUB1	100	98.854	Felis_catus
ENSPPRG00000007096	TRUB1	69	76.667	ENSFALG00000002232	TRUB1	92	76.667	Ficedula_albicollis
ENSPPRG00000007096	TRUB1	70	86.066	ENSFDAG00000008140	TRUB1	95	87.931	Fukomys_damarensis
ENSPPRG00000007096	TRUB1	70	66.531	ENSFHEG00000004016	trub1	84	66.531	Fundulus_heteroclitus
ENSPPRG00000007096	TRUB1	78	75.000	ENSGALG00000009091	TRUB1	97	74.057	Gallus_gallus
ENSPPRG00000007096	TRUB1	68	65.000	ENSGAFG00000009193	trub1	89	63.137	Gambusia_affinis
ENSPPRG00000007096	TRUB1	56	68.205	ENSGACG00000015387	trub1	96	68.205	Gasterosteus_aculeatus
ENSPPRG00000007096	TRUB1	89	72.816	ENSGAGG00000009758	TRUB1	81	77.817	Gopherus_agassizii
ENSPPRG00000007096	TRUB1	99	92.529	ENSGGOG00000004583	TRUB1	96	93.134	Gorilla_gorilla
ENSPPRG00000007096	TRUB1	77	64.419	ENSHBUG00000016787	trub1	95	64.528	Haplochromis_burtoni
ENSPPRG00000007096	TRUB1	99	86.167	ENSHGLG00000015314	TRUB1	86	89.667	Heterocephalus_glaber_female
ENSPPRG00000007096	TRUB1	70	84.426	ENSHGLG00100009183	TRUB1	83	91.878	Heterocephalus_glaber_male
ENSPPRG00000007096	TRUB1	74	66.537	ENSHCOG00000017877	trub1	93	66.537	Hippocampus_comes
ENSPPRG00000007096	TRUB1	77	66.667	ENSIPUG00000017559	trub1	94	66.667	Ictalurus_punctatus
ENSPPRG00000007096	TRUB1	86	93.000	ENSSTOG00000003641	TRUB1	90	93.000	Ictidomys_tridecemlineatus
ENSPPRG00000007096	TRUB1	99	82.759	ENSJJAG00000011800	Trub1	88	90.268	Jaculus_jaculus
ENSPPRG00000007096	TRUB1	72	65.759	ENSKMAG00000006232	trub1	92	65.759	Kryptolebias_marmoratus
ENSPPRG00000007096	TRUB1	76	64.286	ENSLBEG00000026722	trub1	92	64.286	Labrus_bergylta
ENSPPRG00000007096	TRUB1	79	73.913	ENSLACG00000014885	TRUB1	92	73.913	Latimeria_chalumnae
ENSPPRG00000007096	TRUB1	79	71.119	ENSLOCG00000012979	trub1	92	71.795	Lepisosteus_oculatus
ENSPPRG00000007096	TRUB1	99	80.056	ENSLAFG00000015452	TRUB1	85	85.284	Loxodonta_africana
ENSPPRG00000007096	TRUB1	99	91.667	ENSMFAG00000031767	TRUB1	96	92.239	Macaca_fascicularis
ENSPPRG00000007096	TRUB1	99	91.954	ENSMMUG00000001902	TRUB1	96	92.537	Macaca_mulatta
ENSPPRG00000007096	TRUB1	99	87.644	ENSMNEG00000044646	TRUB1	96	88.060	Macaca_nemestrina
ENSPPRG00000007096	TRUB1	99	91.667	ENSMLEG00000042655	TRUB1	96	92.239	Mandrillus_leucophaeus
ENSPPRG00000007096	TRUB1	72	67.063	ENSMZEG00005024095	trub1	91	67.063	Maylandia_zebra
ENSPPRG00000007096	TRUB1	78	73.897	ENSMGAG00000011135	TRUB1	93	73.897	Meleagris_gallopavo
ENSPPRG00000007096	TRUB1	80	85.663	ENSMAUG00000011101	Trub1	88	85.284	Mesocricetus_auratus
ENSPPRG00000007096	TRUB1	99	93.948	ENSMICG00000016324	TRUB1	96	94.030	Microcebus_murinus
ENSPPRG00000007096	TRUB1	99	79.539	ENSMOCG00000017759	Trub1	91	87.000	Microtus_ochrogaster
ENSPPRG00000007096	TRUB1	77	85.185	ENSMODG00000009676	TRUB1	82	80.135	Monodelphis_domestica
ENSPPRG00000007096	TRUB1	99	82.133	MGP_CAROLIEiJ_G0023100	Trub1	89	86.333	Mus_caroli
ENSPPRG00000007096	TRUB1	99	80.980	ENSMUSG00000025086	Trub1	89	85.333	Mus_musculus
ENSPPRG00000007096	TRUB1	99	81.844	MGP_PahariEiJ_G0014588	Trub1	89	86.000	Mus_pahari
ENSPPRG00000007096	TRUB1	99	81.268	MGP_SPRETEiJ_G0024021	Trub1	89	85.667	Mus_spretus
ENSPPRG00000007096	TRUB1	97	94.659	ENSMPUG00000003556	TRUB1	96	94.659	Mustela_putorius_furo
ENSPPRG00000007096	TRUB1	95	87.688	ENSMLUG00000017686	TRUB1	95	87.164	Myotis_lucifugus
ENSPPRG00000007096	TRUB1	99	87.320	ENSNGAG00000018682	Trub1	86	92.667	Nannospalax_galili
ENSPPRG00000007096	TRUB1	70	68.293	ENSNBRG00000023393	trub1	88	68.293	Neolamprologus_brichardi
ENSPPRG00000007096	TRUB1	96	92.239	ENSNLEG00000016345	TRUB1	96	92.239	Nomascus_leucogenys
ENSPPRG00000007096	TRUB1	58	89.552	ENSMEUG00000006603	TRUB1	78	87.204	Notamacropus_eugenii
ENSPPRG00000007096	TRUB1	86	85.333	ENSOPRG00000009371	TRUB1	87	85.333	Ochotona_princeps
ENSPPRG00000007096	TRUB1	99	83.862	ENSODEG00000010854	TRUB1	96	84.478	Octodon_degus
ENSPPRG00000007096	TRUB1	70	67.480	ENSONIG00000007249	trub1	89	67.480	Oreochromis_niloticus
ENSPPRG00000007096	TRUB1	79	80.292	ENSOANG00000001556	TRUB1	93	78.092	Ornithorhynchus_anatinus
ENSPPRG00000007096	TRUB1	99	85.014	ENSOCUG00000009456	TRUB1	95	88.182	Oryctolagus_cuniculus
ENSPPRG00000007096	TRUB1	69	69.295	ENSORLG00000029719	trub1	91	66.798	Oryzias_latipes
ENSPPRG00000007096	TRUB1	69	68.880	ENSORLG00020016767	trub1	89	66.403	Oryzias_latipes_hni
ENSPPRG00000007096	TRUB1	69	68.880	ENSORLG00015014728	trub1	91	66.403	Oryzias_latipes_hsok
ENSPPRG00000007096	TRUB1	74	66.795	ENSOMEG00000014556	trub1	90	66.926	Oryzias_melastigma
ENSPPRG00000007096	TRUB1	99	93.391	ENSOGAG00000015895	TRUB1	96	94.627	Otolemur_garnettii
ENSPPRG00000007096	TRUB1	97	88.761	ENSOARG00000015591	TRUB1	87	92.459	Ovis_aries
ENSPPRG00000007096	TRUB1	99	92.816	ENSPPAG00000043645	TRUB1	96	93.134	Pan_paniscus
ENSPPRG00000007096	TRUB1	100	99.713	ENSPTIG00000006378	TRUB1	100	99.713	Panthera_tigris_altaica
ENSPPRG00000007096	TRUB1	99	92.816	ENSPTRG00000002964	TRUB1	96	93.134	Pan_troglodytes
ENSPPRG00000007096	TRUB1	99	91.954	ENSPANG00000020712	TRUB1	96	92.537	Papio_anubis
ENSPPRG00000007096	TRUB1	78	77.206	ENSPSIG00000012877	TRUB1	93	77.206	Pelodiscus_sinensis
ENSPPRG00000007096	TRUB1	70	65.714	ENSPMGG00000000075	trub1	88	65.714	Periophthalmus_magnuspinnatus
ENSPPRG00000007096	TRUB1	99	77.810	ENSPEMG00000011156	Trub1	88	84.950	Peromyscus_maniculatus_bairdii
ENSPPRG00000007096	TRUB1	82	80.836	ENSPCIG00000009729	TRUB1	81	79.461	Phascolarctos_cinereus
ENSPPRG00000007096	TRUB1	70	66.122	ENSPFOG00000009950	trub1	90	66.122	Poecilia_formosa
ENSPPRG00000007096	TRUB1	70	66.122	ENSPLAG00000013855	trub1	86	66.122	Poecilia_latipinna
ENSPPRG00000007096	TRUB1	70	66.122	ENSPMEG00000009064	trub1	88	66.122	Poecilia_mexicana
ENSPPRG00000007096	TRUB1	70	66.939	ENSPREG00000003343	trub1	88	66.939	Poecilia_reticulata
ENSPPRG00000007096	TRUB1	96	92.537	ENSPPYG00000002676	TRUB1	96	92.537	Pongo_abelii
ENSPPRG00000007096	TRUB1	99	76.353	ENSPCAG00000008427	TRUB1	95	74.777	Procavia_capensis
ENSPPRG00000007096	TRUB1	99	88.184	ENSPCOG00000024360	TRUB1	95	88.323	Propithecus_coquereli
ENSPPRG00000007096	TRUB1	75	93.916	ENSPVAG00000007575	TRUB1	95	94.024	Pteropus_vampyrus
ENSPPRG00000007096	TRUB1	72	67.063	ENSPNYG00000018614	trub1	91	67.063	Pundamilia_nyererei
ENSPPRG00000007096	TRUB1	74	59.615	ENSPNAG00000006881	trub1	84	59.615	Pygocentrus_nattereri
ENSPPRG00000007096	TRUB1	99	81.844	ENSRNOG00000017321	Trub1	88	86.333	Rattus_norvegicus
ENSPPRG00000007096	TRUB1	99	81.897	ENSRBIG00000033423	TRUB1	95	82.090	Rhinopithecus_bieti
ENSPPRG00000007096	TRUB1	99	91.667	ENSRROG00000033902	TRUB1	96	92.239	Rhinopithecus_roxellana
ENSPPRG00000007096	TRUB1	96	92.836	ENSSBOG00000024237	TRUB1	95	92.836	Saimiri_boliviensis_boliviensis
ENSPPRG00000007096	TRUB1	73	79.377	ENSSHAG00000009346	TRUB1	86	79.377	Sarcophilus_harrisii
ENSPPRG00000007096	TRUB1	70	70.782	ENSSFOG00015022124	trub1	87	68.504	Scleropages_formosus
ENSPPRG00000007096	TRUB1	70	68.293	ENSSMAG00000001020	trub1	88	68.293	Scophthalmus_maximus
ENSPPRG00000007096	TRUB1	69	69.167	ENSSDUG00000016414	trub1	92	66.926	Seriola_dumerili
ENSPPRG00000007096	TRUB1	69	69.583	ENSSLDG00000015486	trub1	92	67.315	Seriola_lalandi_dorsalis
ENSPPRG00000007096	TRUB1	78	79.412	ENSSPUG00000001642	TRUB1	93	79.412	Sphenodon_punctatus
ENSPPRG00000007096	TRUB1	75	66.920	ENSSPAG00000001217	trub1	94	66.920	Stegastes_partitus
ENSPPRG00000007096	TRUB1	99	88.793	ENSSSCG00000010653	TRUB1	96	89.254	Sus_scrofa
ENSPPRG00000007096	TRUB1	77	76.296	ENSTGUG00000010971	TRUB1	100	75.089	Taeniopygia_guttata
ENSPPRG00000007096	TRUB1	73	76.772	ENSTBEG00000002880	TRUB1	100	76.772	Tupaia_belangeri
ENSPPRG00000007096	TRUB1	72	88.048	ENSTTRG00000005767	TRUB1	95	91.633	Tursiops_truncatus
ENSPPRG00000007096	TRUB1	97	95.846	ENSUAMG00000024876	TRUB1	96	95.846	Ursus_americanus
ENSPPRG00000007096	TRUB1	97	92.285	ENSUMAG00000002411	TRUB1	96	91.691	Ursus_maritimus
ENSPPRG00000007096	TRUB1	99	93.103	ENSVPAG00000005507	TRUB1	96	93.433	Vicugna_pacos
ENSPPRG00000007096	TRUB1	99	92.816	ENSVVUG00000010085	TRUB1	80	94.030	Vulpes_vulpes
ENSPPRG00000007096	TRUB1	78	67.279	ENSXETG00000023828	trub1	98	67.279	Xenopus_tropicalis
ENSPPRG00000007096	TRUB1	68	65.690	ENSXCOG00000017847	trub1	86	65.021	Xiphophorus_couchianus
ENSPPRG00000007096	TRUB1	70	65.306	ENSXMAG00000014701	trub1	88	65.306	Xiphophorus_maculatus