EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000007125 (Gene tree)
Gene ID: 109260339
Gene Symbol: XRN1
Alias: -
Full Name: 5'-3' exoribonuclease 1
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 124100 bases
Position: chrKV860277.1:18046336-18170435
Accession: 109260339
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000014031	XRN_N	PF03159.18	9e-96	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000012152	XRN1-201	5088	XM_019438497	ENSPPRP00000014031	1695 (aa)	XP_019294042	-

Gene Model

Click here to download ENSPPRG00000007125's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000007125's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000007125	XRN1	100	93.333	ENSG00000114127	XRN1	100	99.394	Homo_sapiens
ENSPPRG00000007125	XRN1	95	73.393	ENSAPOG00000000622	xrn1	98	73.290	Acanthochromis_polyacanthus
ENSPPRG00000007125	XRN1	100	94.067	ENSAMEG00000012538	XRN1	100	94.067	Ailuropoda_melanoleuca
ENSPPRG00000007125	XRN1	95	72.912	ENSACIG00000001057	xrn1	96	72.830	Amphilophus_citrinellus
ENSPPRG00000007125	XRN1	100	61.859	ENSAOCG00000014097	xrn1	95	70.140	Amphiprion_ocellaris
ENSPPRG00000007125	XRN1	100	61.478	ENSAPEG00000006620	xrn1	98	63.107	Amphiprion_percula
ENSPPRG00000007125	XRN1	94	71.463	ENSATEG00000009752	xrn1	95	71.157	Anabas_testudineus
ENSPPRG00000007125	XRN1	99	76.378	ENSAPLG00000004905	XRN1	100	75.914	Anas_platyrhynchos
ENSPPRG00000007125	XRN1	100	73.044	ENSACAG00000004985	XRN1	100	72.482	Anolis_carolinensis
ENSPPRG00000007125	XRN1	100	93.392	ENSANAG00000029013	XRN1	99	96.296	Aotus_nancymaae
ENSPPRG00000007125	XRN1	100	61.158	ENSACLG00000004806	xrn1	97	62.097	Astatotilapia_calliptera
ENSPPRG00000007125	XRN1	99	61.012	ENSAMXG00000019370	xrn1	95	94.175	Astyanax_mexicanus
ENSPPRG00000007125	XRN1	100	93.560	ENSBTAG00000011524	XRN1	100	93.384	Bos_taurus
ENSPPRG00000007125	XRN1	71	39.117	WBGene00012730	xrn-1	80	38.919	Caenorhabditis_elegans
ENSPPRG00000007125	XRN1	100	93.274	ENSCJAG00000001872	XRN1	100	93.274	Callithrix_jacchus
ENSPPRG00000007125	XRN1	100	94.672	ENSCAFG00000007783	XRN1	100	94.672	Canis_familiaris
ENSPPRG00000007125	XRN1	100	94.342	ENSCAFG00020009120	XRN1	99	98.802	Canis_lupus_dingo
ENSPPRG00000007125	XRN1	99	92.139	ENSCHIG00000019192	XRN1	99	91.965	Capra_hircus
ENSPPRG00000007125	XRN1	100	93.337	ENSTSYG00000002705	XRN1	100	93.337	Carlito_syrichta
ENSPPRG00000007125	XRN1	56	76.656	ENSCAPG00000004604	-	99	76.656	Cavia_aperea
ENSPPRG00000007125	XRN1	100	93.746	ENSCCAG00000034800	XRN1	99	97.006	Cebus_capucinus
ENSPPRG00000007125	XRN1	100	93.805	ENSCATG00000041794	XRN1	100	93.805	Cercocebus_atys
ENSPPRG00000007125	XRN1	100	87.601	ENSCLAG00000001451	XRN1	99	95.728	Chinchilla_lanigera
ENSPPRG00000007125	XRN1	100	93.150	ENSCSAG00000011265	XRN1	100	93.150	Chlorocebus_sabaeus
ENSPPRG00000007125	XRN1	57	98.701	ENSCHOG00000013961	-	59	98.701	Choloepus_hoffmanni
ENSPPRG00000007125	XRN1	70	45.242	ENSCSAVG00000008584	-	98	45.000	Ciona_savignyi
ENSPPRG00000007125	XRN1	100	93.864	ENSCANG00000037495	XRN1	99	97.904	Colobus_angolensis_palliatus
ENSPPRG00000007125	XRN1	100	87.991	ENSCGRG00001019411	Xrn1	99	95.411	Cricetulus_griseus_chok1gshd
ENSPPRG00000007125	XRN1	100	87.991	ENSCGRG00000012464	Xrn1	99	95.411	Cricetulus_griseus_crigri
ENSPPRG00000007125	XRN1	100	56.631	ENSCSEG00000021285	xrn1	94	95.192	Cynoglossus_semilaevis
ENSPPRG00000007125	XRN1	67	69.244	ENSCVAG00000013089	xrn1	99	72.511	Cyprinodon_variegatus
ENSPPRG00000007125	XRN1	99	63.423	ENSDARG00000091652	xrn1	98	80.000	Danio_rerio
ENSPPRG00000007125	XRN1	100	87.102	ENSDORG00000013833	Xrn1	100	87.045	Dipodomys_ordii
ENSPPRG00000007125	XRN1	75	39.829	FBgn0020261	pcm	76	39.660	Drosophila_melanogaster
ENSPPRG00000007125	XRN1	86	100.000	ENSETEG00000003978	XRN1	88	99.194	Echinops_telfairi
ENSPPRG00000007125	XRN1	100	93.443	ENSEASG00005002687	XRN1	99	97.305	Equus_asinus_asinus
ENSPPRG00000007125	XRN1	100	93.443	ENSECAG00000008301	XRN1	100	93.443	Equus_caballus
ENSPPRG00000007125	XRN1	92	83.203	ENSEEUG00000011323	XRN1	92	83.203	Erinaceus_europaeus
ENSPPRG00000007125	XRN1	100	61.870	ENSELUG00000000169	xrn1	100	61.753	Esox_lucius
ENSPPRG00000007125	XRN1	100	94.926	ENSFCAG00000027589	XRN1	99	98.681	Felis_catus
ENSPPRG00000007125	XRN1	100	74.804	ENSFALG00000007021	XRN1	100	74.130	Ficedula_albicollis
ENSPPRG00000007125	XRN1	100	88.466	ENSFDAG00000020494	XRN1	99	95.253	Fukomys_damarensis
ENSPPRG00000007125	XRN1	84	68.729	ENSGMOG00000006396	xrn1	80	68.144	Gadus_morhua
ENSPPRG00000007125	XRN1	100	75.084	ENSGALG00000002706	XRN1	100	74.634	Gallus_gallus
ENSPPRG00000007125	XRN1	100	60.011	ENSGACG00000014328	xrn1	100	60.113	Gasterosteus_aculeatus
ENSPPRG00000007125	XRN1	95	78.253	ENSGAGG00000017535	XRN1	99	77.711	Gopherus_agassizii
ENSPPRG00000007125	XRN1	100	93.451	ENSGGOG00000008047	XRN1	100	93.451	Gorilla_gorilla
ENSPPRG00000007125	XRN1	100	61.137	ENSHBUG00000005908	xrn1	98	73.415	Haplochromis_burtoni
ENSPPRG00000007125	XRN1	100	89.107	ENSHGLG00000014476	XRN1	99	96.108	Heterocephalus_glaber_female
ENSPPRG00000007125	XRN1	100	89.107	ENSHGLG00100015130	XRN1	99	96.108	Heterocephalus_glaber_male
ENSPPRG00000007125	XRN1	96	71.256	ENSHCOG00000014062	xrn1	99	71.234	Hippocampus_comes
ENSPPRG00000007125	XRN1	99	62.680	ENSIPUG00000015229	xrn1	99	62.680	Ictalurus_punctatus
ENSPPRG00000007125	XRN1	100	91.518	ENSSTOG00000013552	XRN1	99	97.305	Ictidomys_tridecemlineatus
ENSPPRG00000007125	XRN1	98	86.659	ENSJJAG00000010863	Xrn1	99	94.311	Jaculus_jaculus
ENSPPRG00000007125	XRN1	94	62.302	ENSKMAG00000021356	xrn1	94	76.211	Kryptolebias_marmoratus
ENSPPRG00000007125	XRN1	100	60.352	ENSLBEG00000018656	xrn1	97	96.117	Labrus_bergylta
ENSPPRG00000007125	XRN1	100	70.068	ENSLACG00000009020	XRN1	100	69.345	Latimeria_chalumnae
ENSPPRG00000007125	XRN1	100	65.764	ENSLOCG00000007944	xrn1	98	65.634	Lepisosteus_oculatus
ENSPPRG00000007125	XRN1	63	95.981	ENSLAFG00000015426	XRN1	100	95.981	Loxodonta_africana
ENSPPRG00000007125	XRN1	100	93.923	ENSMFAG00000032599	XRN1	100	93.923	Macaca_fascicularis
ENSPPRG00000007125	XRN1	100	93.864	ENSMMUG00000014038	XRN1	100	93.864	Macaca_mulatta
ENSPPRG00000007125	XRN1	100	93.687	ENSMNEG00000034217	XRN1	100	93.687	Macaca_nemestrina
ENSPPRG00000007125	XRN1	94	71.609	ENSMAMG00000013219	xrn1	94	77.572	Mastacembelus_armatus
ENSPPRG00000007125	XRN1	100	61.045	ENSMZEG00005015099	xrn1	97	62.045	Maylandia_zebra
ENSPPRG00000007125	XRN1	99	75.073	ENSMGAG00000006333	XRN1	100	74.608	Meleagris_gallopavo
ENSPPRG00000007125	XRN1	100	93.526	ENSMICG00000048948	XRN1	96	100.000	Microcebus_murinus
ENSPPRG00000007125	XRN1	57	94.304	ENSMOCG00000008665	Xrn1	99	94.304	Microtus_ochrogaster
ENSPPRG00000007125	XRN1	100	81.574	ENSMODG00000021236	XRN1	100	81.283	Monodelphis_domestica
ENSPPRG00000007125	XRN1	100	57.377	ENSMALG00000004098	xrn1	100	57.224	Monopterus_albus
ENSPPRG00000007125	XRN1	96	94.479	MGP_CAROLIEiJ_G0032535	Xrn1	100	97.500	Mus_caroli
ENSPPRG00000007125	XRN1	100	86.316	ENSMUSG00000032410	Xrn1	100	97.500	Mus_musculus
ENSPPRG00000007125	XRN1	100	86.490	MGP_PahariEiJ_G0015404	Xrn1	100	97.500	Mus_pahari
ENSPPRG00000007125	XRN1	100	86.374	MGP_SPRETEiJ_G0033678	Xrn1	100	97.500	Mus_spretus
ENSPPRG00000007125	XRN1	100	95.667	ENSMPUG00000012040	XRN1	100	95.667	Mustela_putorius_furo
ENSPPRG00000007125	XRN1	100	90.133	ENSMLUG00000016885	XRN1	100	90.017	Myotis_lucifugus
ENSPPRG00000007125	XRN1	57	94.611	ENSNGAG00000023964	Xrn1	99	91.587	Nannospalax_galili
ENSPPRG00000007125	XRN1	100	93.746	ENSNLEG00000004726	XRN1	100	93.746	Nomascus_leucogenys
ENSPPRG00000007125	XRN1	76	98.969	ENSMEUG00000014473	-	77	99.029	Notamacropus_eugenii
ENSPPRG00000007125	XRN1	79	84.505	ENSOPRG00000007337	-	78	84.505	Ochotona_princeps
ENSPPRG00000007125	XRN1	100	61.499	ENSONIG00000016673	xrn1	99	65.546	Oreochromis_niloticus
ENSPPRG00000007125	XRN1	92	77.287	ENSOANG00000006735	XRN1	100	77.098	Ornithorhynchus_anatinus
ENSPPRG00000007125	XRN1	100	89.347	ENSOCUG00000001861	XRN1	100	89.175	Oryctolagus_cuniculus
ENSPPRG00000007125	XRN1	100	61.760	ENSORLG00000013005	xrn1	95	63.281	Oryzias_latipes
ENSPPRG00000007125	XRN1	100	62.204	ENSORLG00020005559	xrn1	100	62.384	Oryzias_latipes_hni
ENSPPRG00000007125	XRN1	100	61.469	ENSORLG00015022523	xrn1	95	63.268	Oryzias_latipes_hsok
ENSPPRG00000007125	XRN1	95	73.089	ENSOMEG00000015397	xrn1	100	73.436	Oryzias_melastigma
ENSPPRG00000007125	XRN1	100	89.936	ENSOGAG00000000170	XRN1	100	89.936	Otolemur_garnettii
ENSPPRG00000007125	XRN1	99	94.138	ENSOARG00000006343	XRN1	99	93.962	Ovis_aries
ENSPPRG00000007125	XRN1	100	93.451	ENSPPAG00000010180	XRN1	100	93.451	Pan_paniscus
ENSPPRG00000007125	XRN1	100	99.823	ENSPTIG00000021081	XRN1	100	99.823	Panthera_tigris_altaica
ENSPPRG00000007125	XRN1	100	93.510	ENSPTRG00000015482	XRN1	100	93.510	Pan_troglodytes
ENSPPRG00000007125	XRN1	100	93.746	ENSPANG00000010638	XRN1	100	93.746	Papio_anubis
ENSPPRG00000007125	XRN1	100	76.598	ENSPSIG00000018050	XRN1	100	76.941	Pelodiscus_sinensis
ENSPPRG00000007125	XRN1	57	77.900	ENSPMGG00000002648	xrn1	98	77.883	Periophthalmus_magnuspinnatus
ENSPPRG00000007125	XRN1	57	95.253	ENSPEMG00000020610	Xrn1	99	95.253	Peromyscus_maniculatus_bairdii
ENSPPRG00000007125	XRN1	65	50.591	ENSPMAG00000002975	xrn1	91	77.874	Petromyzon_marinus
ENSPPRG00000007125	XRN1	100	81.061	ENSPCIG00000028735	XRN1	99	89.850	Phascolarctos_cinereus
ENSPPRG00000007125	XRN1	91	64.891	ENSPFOG00000013932	xrn1	99	65.170	Poecilia_formosa
ENSPPRG00000007125	XRN1	91	63.982	ENSPLAG00000021653	xrn1	99	64.594	Poecilia_latipinna
ENSPPRG00000007125	XRN1	89	64.637	ENSPMEG00000003076	xrn1	95	64.854	Poecilia_mexicana
ENSPPRG00000007125	XRN1	100	61.266	ENSPREG00000021147	xrn1	97	62.081	Poecilia_reticulata
ENSPPRG00000007125	XRN1	100	92.623	ENSPPYG00000014172	XRN1	100	92.623	Pongo_abelii
ENSPPRG00000007125	XRN1	87	84.413	ENSPCAG00000005638	XRN1	96	84.413	Procavia_capensis
ENSPPRG00000007125	XRN1	100	93.632	ENSPCOG00000013089	XRN1	99	97.605	Propithecus_coquereli
ENSPPRG00000007125	XRN1	94	92.814	ENSPVAG00000016265	XRN1	96	92.814	Pteropus_vampyrus
ENSPPRG00000007125	XRN1	100	61.538	ENSPNYG00000010570	xrn1	96	62.725	Pundamilia_nyererei
ENSPPRG00000007125	XRN1	99	60.599	ENSPNAG00000023531	xrn1	97	61.006	Pygocentrus_nattereri
ENSPPRG00000007125	XRN1	100	87.009	ENSRNOG00000042951	Xrn1	100	86.894	Rattus_norvegicus
ENSPPRG00000007125	XRN1	100	92.920	ENSRBIG00000041227	XRN1	100	92.920	Rhinopithecus_bieti
ENSPPRG00000007125	XRN1	67	54.496	YGL173C	XRN1	73	54.496	Saccharomyces_cerevisiae
ENSPPRG00000007125	XRN1	100	93.215	ENSSBOG00000029561	XRN1	100	93.215	Saimiri_boliviensis_boliviensis
ENSPPRG00000007125	XRN1	99	81.195	ENSSHAG00000016207	XRN1	100	80.840	Sarcophilus_harrisii
ENSPPRG00000007125	XRN1	100	61.472	ENSSFOG00015024211	xrn1	97	62.671	Scleropages_formosus
ENSPPRG00000007125	XRN1	93	72.559	ENSSMAG00000016534	xrn1	94	72.603	Scophthalmus_maximus
ENSPPRG00000007125	XRN1	90	73.008	ENSSDUG00000010306	xrn1	97	73.008	Seriola_dumerili
ENSPPRG00000007125	XRN1	94	72.474	ENSSLDG00000021543	xrn1	99	72.474	Seriola_lalandi_dorsalis
ENSPPRG00000007125	XRN1	68	84.727	ENSSARG00000007741	-	83	84.727	Sorex_araneus
ENSPPRG00000007125	XRN1	100	77.204	ENSTGUG00000008498	XRN1	100	76.682	Taeniopygia_guttata
ENSPPRG00000007125	XRN1	100	59.477	ENSTRUG00000004895	xrn1	96	77.292	Takifugu_rubripes
ENSPPRG00000007125	XRN1	100	59.109	ENSTNIG00000017615	xrn1	99	59.611	Tetraodon_nigroviridis
ENSPPRG00000007125	XRN1	84	97.035	ENSTBEG00000003256	XRN1	84	97.035	Tupaia_belangeri
ENSPPRG00000007125	XRN1	100	89.930	ENSTTRG00000012914	XRN1	100	89.696	Tursiops_truncatus
ENSPPRG00000007125	XRN1	100	94.441	ENSUAMG00000001608	XRN1	99	98.802	Ursus_americanus
ENSPPRG00000007125	XRN1	100	96.314	ENSUMAG00000013625	XRN1	100	96.314	Ursus_maritimus
ENSPPRG00000007125	XRN1	100	91.042	ENSVPAG00000004690	XRN1	100	91.042	Vicugna_pacos
ENSPPRG00000007125	XRN1	100	95.785	ENSVVUG00000024461	XRN1	98	100.000	Vulpes_vulpes
ENSPPRG00000007125	XRN1	100	69.271	ENSXETG00000000619	xrn1	97	89.247	Xenopus_tropicalis
ENSPPRG00000007125	XRN1	100	61.277	ENSXCOG00000007917	xrn1	95	62.553	Xiphophorus_couchianus
ENSPPRG00000007125	XRN1	92	72.231	ENSXMAG00000018320	xrn1	95	72.394	Xiphophorus_maculatus