EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000007521 (Gene tree)
Gene ID: 109259969
Gene Symbol: GFI1
Alias: -
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 10933 bases
Position: chrKV860488.1:256184-267116
Accession: 109259969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000014728	zf-C2H2	PF00096.26	8.9e-27	1	6
ENSPPRP00000014728	zf-C2H2	PF00096.26	8.9e-27	2	6
ENSPPRP00000014728	zf-C2H2	PF00096.26	8.9e-27	3	6
ENSPPRP00000014728	zf-C2H2	PF00096.26	8.9e-27	4	6
ENSPPRP00000014728	zf-C2H2	PF00096.26	8.9e-27	5	6
ENSPPRP00000014728	zf-C2H2	PF00096.26	8.9e-27	6	6
ENSPPRP00000014728	zf-met	PF12874.7	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000012872	GFI1-201	4326	XM_019437961	ENSPPRP00000014728	422 (aa)	XP_019293506	UPI0001613DD3

Gene Model

Click here to download ENSPPRG00000007521's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000007521's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000007521	GFI1	56	31.638	ENSPPRG00000016750	-	52	39.815
ENSPPRG00000007521	GFI1	50	43.750	ENSPPRG00000014343	ZNF226	74	43.750
ENSPPRG00000007521	GFI1	55	38.889	ENSPPRG00000015444	ZNF319	84	38.889
ENSPPRG00000007521	GFI1	53	42.690	ENSPPRG00000014318	ZNF317	83	42.690
ENSPPRG00000007521	GFI1	58	42.045	ENSPPRG00000002587	ZNF81	64	42.045

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000007521	GFI1	100	93.602	ENSG00000162676	GFI1	100	93.602	Homo_sapiens
ENSPPRG00000007521	GFI1	100	62.207	ENSAPOG00000015189	gfi1ab	100	61.972	Acanthochromis_polyacanthus
ENSPPRG00000007521	GFI1	100	63.146	ENSACIG00000016354	gfi1ab	100	62.850	Amphilophus_citrinellus
ENSPPRG00000007521	GFI1	100	55.294	ENSAOCG00000008339	gfi1ab	100	52.347	Amphiprion_ocellaris
ENSPPRG00000007521	GFI1	100	63.488	ENSAPEG00000023870	gfi1ab	100	61.033	Amphiprion_percula
ENSPPRG00000007521	GFI1	100	59.529	ENSATEG00000009167	gfi1ab	89	59.953	Anabas_testudineus
ENSPPRG00000007521	GFI1	87	75.472	ENSAPLG00000015700	GFI1	99	75.472	Anas_platyrhynchos
ENSPPRG00000007521	GFI1	100	72.517	ENSACAG00000004498	GFI1	100	72.286	Anolis_carolinensis
ENSPPRG00000007521	GFI1	100	91.706	ENSANAG00000019656	GFI1	100	91.706	Aotus_nancymaae
ENSPPRG00000007521	GFI1	100	63.403	ENSACLG00000026458	gfi1ab	93	62.181	Astatotilapia_calliptera
ENSPPRG00000007521	GFI1	100	61.358	ENSAMXG00000039600	gfi1ab	100	60.890	Astyanax_mexicanus
ENSPPRG00000007521	GFI1	67	46.535	ENSAMXG00000015228	-	56	62.360	Astyanax_mexicanus
ENSPPRG00000007521	GFI1	100	95.261	ENSBTAG00000016723	GFI1	100	95.261	Bos_taurus
ENSPPRG00000007521	GFI1	100	91.469	ENSCJAG00000017609	GFI1	100	91.469	Callithrix_jacchus
ENSPPRG00000007521	GFI1	100	97.630	ENSCAFG00000020155	GFI1	100	97.630	Canis_familiaris
ENSPPRG00000007521	GFI1	100	97.630	ENSCAFG00020013371	GFI1	88	97.630	Canis_lupus_dingo
ENSPPRG00000007521	GFI1	100	95.024	ENSCHIG00000016135	GFI1	100	95.024	Capra_hircus
ENSPPRG00000007521	GFI1	100	90.284	ENSCPOG00000011727	GFI1	100	90.521	Cavia_porcellus
ENSPPRG00000007521	GFI1	100	91.943	ENSCCAG00000036072	GFI1	100	91.943	Cebus_capucinus
ENSPPRG00000007521	GFI1	100	93.128	ENSCATG00000037873	GFI1	100	93.128	Cercocebus_atys
ENSPPRG00000007521	GFI1	100	85.545	ENSCLAG00000005915	GFI1	100	84.332	Chinchilla_lanigera
ENSPPRG00000007521	GFI1	86	91.758	ENSCSAG00000001469	GFI1	100	91.758	Chlorocebus_sabaeus
ENSPPRG00000007521	GFI1	100	92.891	ENSCANG00000034077	GFI1	100	92.891	Colobus_angolensis_palliatus
ENSPPRG00000007521	GFI1	100	87.204	ENSCGRG00001015432	Gfi1	100	87.204	Cricetulus_griseus_chok1gshd
ENSPPRG00000007521	GFI1	100	58.508	ENSCSEG00000017729	GFI1	100	57.931	Cynoglossus_semilaevis
ENSPPRG00000007521	GFI1	100	61.215	ENSCVAG00000011828	gfi1ab	100	59.346	Cyprinodon_variegatus
ENSPPRG00000007521	GFI1	100	59.953	ENSCVAG00000004930	GFI1	100	60.093	Cyprinodon_variegatus
ENSPPRG00000007521	GFI1	100	64.486	ENSDARG00000044457	gfi1ab	100	64.486	Danio_rerio
ENSPPRG00000007521	GFI1	100	91.017	ENSDNOG00000000782	GFI1	97	92.435	Dasypus_novemcinctus
ENSPPRG00000007521	GFI1	100	93.144	ENSEASG00005015509	GFI1	86	93.144	Equus_asinus_asinus
ENSPPRG00000007521	GFI1	86	92.582	ENSECAG00000006647	GFI1	92	87.661	Equus_caballus
ENSPPRG00000007521	GFI1	100	85.782	ENSEEUG00000000198	GFI1	100	85.308	Erinaceus_europaeus
ENSPPRG00000007521	GFI1	100	64.037	ENSELUG00000003015	gfi1ab	99	63.805	Esox_lucius
ENSPPRG00000007521	GFI1	100	59.155	ENSELUG00000019033	GFI1	100	58.920	Esox_lucius
ENSPPRG00000007521	GFI1	100	100.000	ENSFCAG00000005914	GFI1	100	100.000	Felis_catus
ENSPPRG00000007521	GFI1	100	62.093	ENSFHEG00000010997	gfi1ab	100	61.395	Fundulus_heteroclitus
ENSPPRG00000007521	GFI1	100	58.486	ENSFHEG00000000341	GFI1	100	59.954	Fundulus_heteroclitus
ENSPPRG00000007521	GFI1	100	60.981	ENSGMOG00000007737	gfi1ab	100	60.981	Gadus_morhua
ENSPPRG00000007521	GFI1	100	74.710	ENSGALG00000043650	GFI1	100	74.710	Gallus_gallus
ENSPPRG00000007521	GFI1	100	61.860	ENSGAFG00000016637	gfi1ab	100	61.305	Gambusia_affinis
ENSPPRG00000007521	GFI1	100	59.070	ENSGAFG00000018063	GFI1	100	60.321	Gambusia_affinis
ENSPPRG00000007521	GFI1	100	63.121	ENSGACG00000004257	gfi1ab	97	63.059	Gasterosteus_aculeatus
ENSPPRG00000007521	GFI1	100	93.602	ENSGGOG00000005320	GFI1	100	93.602	Gorilla_gorilla
ENSPPRG00000007521	GFI1	100	63.294	ENSHBUG00000011969	gfi1ab	100	62.061	Haplochromis_burtoni
ENSPPRG00000007521	GFI1	100	89.810	ENSHGLG00000008020	GFI1	100	90.047	Heterocephalus_glaber_female
ENSPPRG00000007521	GFI1	100	89.810	ENSHGLG00100000610	GFI1	100	90.047	Heterocephalus_glaber_male
ENSPPRG00000007521	GFI1	100	56.604	ENSHCOG00000019555	GFI1	100	57.042	Hippocampus_comes
ENSPPRG00000007521	GFI1	100	54.222	ENSHCOG00000008590	gfi1ab	100	52.000	Hippocampus_comes
ENSPPRG00000007521	GFI1	100	57.077	ENSIPUG00000013414	GFI1	100	57.773	Ictalurus_punctatus
ENSPPRG00000007521	GFI1	100	62.264	ENSIPUG00000010071	gfi1ab	87	61.395	Ictalurus_punctatus
ENSPPRG00000007521	GFI1	54	50.612	ENSIPUG00000021407	-	52	64.118	Ictalurus_punctatus
ENSPPRG00000007521	GFI1	100	91.469	ENSSTOG00000014583	GFI1	100	91.469	Ictidomys_tridecemlineatus
ENSPPRG00000007521	GFI1	100	63.700	ENSKMAG00000003810	gfi1ab	100	63.232	Kryptolebias_marmoratus
ENSPPRG00000007521	GFI1	100	62.676	ENSLBEG00000027776	gfi1ab	100	61.521	Labrus_bergylta
ENSPPRG00000007521	GFI1	100	69.159	ENSLACG00000013362	GFI1	98	69.159	Latimeria_chalumnae
ENSPPRG00000007521	GFI1	99	68.571	ENSLACG00000017590	-	99	68.571	Latimeria_chalumnae
ENSPPRG00000007521	GFI1	100	66.744	ENSLOCG00000004711	gfi1ab	100	66.282	Lepisosteus_oculatus
ENSPPRG00000007521	GFI1	100	86.730	ENSLAFG00000018346	GFI1	100	85.782	Loxodonta_africana
ENSPPRG00000007521	GFI1	100	93.128	ENSMFAG00000045801	GFI1	100	93.128	Macaca_fascicularis
ENSPPRG00000007521	GFI1	100	93.128	ENSMNEG00000036338	GFI1	100	93.128	Macaca_nemestrina
ENSPPRG00000007521	GFI1	100	93.128	ENSMLEG00000036181	GFI1	100	93.128	Mandrillus_leucophaeus
ENSPPRG00000007521	GFI1	100	63.934	ENSMAMG00000008125	gfi1ab	100	63.170	Mastacembelus_armatus
ENSPPRG00000007521	GFI1	100	63.636	ENSMZEG00005009895	gfi1ab	100	62.413	Maylandia_zebra
ENSPPRG00000007521	GFI1	88	76.344	ENSMGAG00000008187	GFI1	100	76.344	Meleagris_gallopavo
ENSPPRG00000007521	GFI1	100	93.839	ENSMICG00000047208	GFI1	100	93.839	Microcebus_murinus
ENSPPRG00000007521	GFI1	100	58.701	ENSMMOG00000005556	gfi1ab	100	58.469	Mola_mola
ENSPPRG00000007521	GFI1	100	79.634	ENSMODG00000011802	GFI1	100	78.719	Monodelphis_domestica
ENSPPRG00000007521	GFI1	100	62.676	ENSMALG00000014672	gfi1ab	100	61.449	Monopterus_albus
ENSPPRG00000007521	GFI1	100	88.180	MGP_CAROLIEiJ_G0027508	Gfi1	100	100.000	Mus_caroli
ENSPPRG00000007521	GFI1	100	87.707	ENSMUSG00000029275	Gfi1	100	87.707	Mus_musculus
ENSPPRG00000007521	GFI1	100	87.234	MGP_PahariEiJ_G0017280	Gfi1	100	100.000	Mus_pahari
ENSPPRG00000007521	GFI1	100	87.470	MGP_SPRETEiJ_G0028507	Gfi1	100	87.470	Mus_spretus
ENSPPRG00000007521	GFI1	100	86.019	ENSMPUG00000004178	GFI1	97	86.019	Mustela_putorius_furo
ENSPPRG00000007521	GFI1	100	91.038	ENSMLUG00000015191	GFI1	97	90.802	Myotis_lucifugus
ENSPPRG00000007521	GFI1	100	62.356	ENSNBRG00000015774	gfi1ab	100	60.000	Neolamprologus_brichardi
ENSPPRG00000007521	GFI1	93	91.816	ENSNLEG00000010470	GFI1	97	91.816	Nomascus_leucogenys
ENSPPRG00000007521	GFI1	100	91.943	ENSOPRG00000001473	GFI1	100	91.943	Ochotona_princeps
ENSPPRG00000007521	GFI1	100	63.318	ENSONIG00000019246	gfi1ab	100	62.093	Oreochromis_niloticus
ENSPPRG00000007521	GFI1	86	89.617	ENSOCUG00000023553	GFI1	93	90.984	Oryctolagus_cuniculus
ENSPPRG00000007521	GFI1	100	58.080	ENSORLG00000005060	GFI1	100	58.411	Oryzias_latipes
ENSPPRG00000007521	GFI1	100	61.358	ENSORLG00000013806	gfi1ab	100	60.890	Oryzias_latipes
ENSPPRG00000007521	GFI1	75	61.468	ENSORLG00020002817	GFI1	90	60.059	Oryzias_latipes_hni
ENSPPRG00000007521	GFI1	100	61.827	ENSORLG00020001602	gfi1ab	100	61.358	Oryzias_latipes_hni
ENSPPRG00000007521	GFI1	100	58.879	ENSORLG00015006070	GFI1	100	57.919	Oryzias_latipes_hsok
ENSPPRG00000007521	GFI1	100	58.080	ENSOMEG00000016722	GFI1	100	58.837	Oryzias_melastigma
ENSPPRG00000007521	GFI1	100	75.765	ENSOGAG00000027913	GFI1	100	78.199	Otolemur_garnettii
ENSPPRG00000007521	GFI1	69	97.143	ENSOARG00000016329	GFI1	94	97.143	Ovis_aries
ENSPPRG00000007521	GFI1	100	76.995	ENSPPAG00000042186	GFI1	100	68.246	Pan_paniscus
ENSPPRG00000007521	GFI1	100	93.365	ENSPTRG00000043053	GFI1	100	93.365	Pan_troglodytes
ENSPPRG00000007521	GFI1	100	93.128	ENSPANG00000016433	GFI1	100	93.128	Papio_anubis
ENSPPRG00000007521	GFI1	100	65.207	ENSPKIG00000004263	GFI1	100	63.364	Paramormyrops_kingsleyae
ENSPPRG00000007521	GFI1	88	75.335	ENSPSIG00000008734	GFI1	97	75.335	Pelodiscus_sinensis
ENSPPRG00000007521	GFI1	100	58.962	ENSPMGG00000012546	gfi1ab	100	59.005	Periophthalmus_magnuspinnatus
ENSPPRG00000007521	GFI1	100	81.395	ENSPCIG00000013728	GFI1	100	81.163	Phascolarctos_cinereus
ENSPPRG00000007521	GFI1	100	61.949	ENSPFOG00000023214	gfi1ab	100	60.789	Poecilia_formosa
ENSPPRG00000007521	GFI1	100	60.606	ENSPLAG00000005376	GFI1	91	61.628	Poecilia_latipinna
ENSPPRG00000007521	GFI1	100	61.949	ENSPLAG00000010879	gfi1ab	98	76.471	Poecilia_latipinna
ENSPPRG00000007521	GFI1	100	60.606	ENSPMEG00000019299	GFI1	100	61.395	Poecilia_mexicana
ENSPPRG00000007521	GFI1	100	62.207	ENSPMEG00000013694	gfi1ab	100	61.972	Poecilia_mexicana
ENSPPRG00000007521	GFI1	100	54.853	ENSPREG00000007997	GFI1	82	95.625	Poecilia_reticulata
ENSPPRG00000007521	GFI1	100	62.181	ENSPREG00000014097	gfi1ab	100	61.111	Poecilia_reticulata
ENSPPRG00000007521	GFI1	100	80.000	ENSPCAG00000011020	GFI1	100	80.000	Procavia_capensis
ENSPPRG00000007521	GFI1	100	93.128	ENSPCOG00000020540	GFI1	100	93.128	Propithecus_coquereli
ENSPPRG00000007521	GFI1	100	89.100	ENSPVAG00000006928	GFI1	100	89.573	Pteropus_vampyrus
ENSPPRG00000007521	GFI1	100	63.403	ENSPNYG00000021183	gfi1ab	100	62.181	Pundamilia_nyererei
ENSPPRG00000007521	GFI1	100	62.588	ENSPNAG00000027258	gfi1ab	100	60.890	Pygocentrus_nattereri
ENSPPRG00000007521	GFI1	100	54.988	ENSPNAG00000028014	GFI1	100	55.220	Pygocentrus_nattereri
ENSPPRG00000007521	GFI1	99	49.793	ENSPNAG00000014299	-	58	62.147	Pygocentrus_nattereri
ENSPPRG00000007521	GFI1	100	86.761	ENSRNOG00000002042	Gfi1	100	86.761	Rattus_norvegicus
ENSPPRG00000007521	GFI1	100	93.128	ENSRBIG00000036467	GFI1	100	93.128	Rhinopithecus_bieti
ENSPPRG00000007521	GFI1	100	93.128	ENSRROG00000031687	GFI1	100	93.128	Rhinopithecus_roxellana
ENSPPRG00000007521	GFI1	100	91.943	ENSSBOG00000031300	GFI1	100	91.943	Saimiri_boliviensis_boliviensis
ENSPPRG00000007521	GFI1	100	66.821	ENSSFOG00015020295	gfi1	100	66.589	Scleropages_formosus
ENSPPRG00000007521	GFI1	100	62.529	ENSSMAG00000002782	gfi1ab	100	61.827	Scophthalmus_maximus
ENSPPRG00000007521	GFI1	100	62.118	ENSSDUG00000022410	gfi1ab	100	62.118	Seriola_dumerili
ENSPPRG00000007521	GFI1	100	62.353	ENSSLDG00000020163	gfi1ab	100	62.353	Seriola_lalandi_dorsalis
ENSPPRG00000007521	GFI1	82	76.471	ENSSPAG00000009140	gfi1ab	100	76.471	Stegastes_partitus
ENSPPRG00000007521	GFI1	100	95.024	ENSSSCG00000006902	GFI1	100	95.024	Sus_scrofa
ENSPPRG00000007521	GFI1	88	76.280	ENSTGUG00000006060	GFI1	100	76.280	Taeniopygia_guttata
ENSPPRG00000007521	GFI1	100	60.047	ENSTRUG00000000415	gfi1ab	100	59.813	Takifugu_rubripes
ENSPPRG00000007521	GFI1	100	59.719	ENSTNIG00000000651	gfi1ab	97	60.706	Tetraodon_nigroviridis
ENSPPRG00000007521	GFI1	100	94.550	ENSTTRG00000000082	GFI1	100	94.550	Tursiops_truncatus
ENSPPRG00000007521	GFI1	100	90.780	ENSUAMG00000021124	GFI1	91	90.780	Ursus_americanus
ENSPPRG00000007521	GFI1	100	67.925	ENSXETG00000023006	gfi1	98	67.612	Xenopus_tropicalis
ENSPPRG00000007521	GFI1	87	54.424	ENSXMAG00000009274	GFI1	70	55.381	Xiphophorus_maculatus
ENSPPRG00000007521	GFI1	100	61.343	ENSXMAG00000010523	gfi1ab	100	60.880	Xiphophorus_maculatus