EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000007571 (Gene tree)
Gene ID: 109269505
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 99287 bases
Position: chrKV860296.1:25043000-25142286
Accession: 109269505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000014772	ResIII	PF04851.15	1.3e-11	1	1
ENSPPRP00000014780	ResIII	PF04851.15	1.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000012928	-	3656	XM_019453480	ENSPPRP00000014772	726 (aa)	XP_019309025	UPI000904E35A
ENSPPRT00000012942	-	3071	XM_019453483	ENSPPRP00000014780	911 (aa)	XP_019309028	UPI000905D46F

Gene Model

Click here to download ENSPPRG00000007571's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000007571's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000007571	-	90	44.113	ENSPPRG00000010317	RAD54L	84	44.113
ENSPPRG00000007571	-	69	31.335	ENSPPRG00000010258	CHD1L	50	31.335
ENSPPRG00000007571	-	74	30.565	ENSPPRG00000019238	ERCC6L2	82	30.565
ENSPPRG00000007571	-	65	35.437	ENSPPRG00000005839	HELLS	64	35.437
ENSPPRG00000007571	-	68	31.955	ENSPPRG00000024756	SMARCAD1	85	31.955

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000007571	-	99	90.746	ENSG00000265817	FSBP	99	90.746	Homo_sapiens
ENSPPRG00000007571	-	99	90.746	ENSG00000197275	RAD54B	99	87.459	Homo_sapiens
ENSPPRG00000007571	-	100	95.317	ENSAMEG00000005834	-	100	93.963	Ailuropoda_melanoleuca
ENSPPRG00000007571	-	99	58.743	ENSACIG00000013005	rad54b	99	54.733	Amphilophus_citrinellus
ENSPPRG00000007571	-	99	59.946	ENSAOCG00000008523	rad54b	99	54.749	Amphiprion_ocellaris
ENSPPRG00000007571	-	99	59.072	ENSAPEG00000001673	rad54b	99	55.556	Amphiprion_percula
ENSPPRG00000007571	-	99	58.799	ENSATEG00000001527	rad54b	99	53.913	Anabas_testudineus
ENSPPRG00000007571	-	99	74.793	ENSAPLG00000014366	-	99	68.525	Anas_platyrhynchos
ENSPPRG00000007571	-	99	71.369	ENSACAG00000003671	-	99	71.554	Anolis_carolinensis
ENSPPRG00000007571	-	89	87.963	ENSANAG00000019528	-	99	87.963	Aotus_nancymaae
ENSPPRG00000007571	-	99	59.153	ENSACLG00000007826	rad54b	92	59.572	Astatotilapia_calliptera
ENSPPRG00000007571	-	99	57.967	ENSAMXG00000039985	rad54b	94	58.093	Astyanax_mexicanus
ENSPPRG00000007571	-	100	90.634	ENSBTAG00000000632	RAD54B	100	87.377	Bos_taurus
ENSPPRG00000007571	-	80	34.487	WBGene00013792	Y116A8C.13	98	32.494	Caenorhabditis_elegans
ENSPPRG00000007571	-	99	88.966	ENSCJAG00000000080	-	99	88.966	Callithrix_jacchus
ENSPPRG00000007571	-	100	92.837	ENSCAFG00000009179	RAD54B	99	90.779	Canis_familiaris
ENSPPRG00000007571	-	100	92.975	ENSCAFG00020012084	-	99	90.889	Canis_lupus_dingo
ENSPPRG00000007571	-	100	90.358	ENSCHIG00000008230	-	100	86.828	Capra_hircus
ENSPPRG00000007571	-	100	88.981	ENSTSYG00000013234	-	100	85.950	Carlito_syrichta
ENSPPRG00000007571	-	100	86.501	ENSCPOG00000011643	-	99	82.217	Cavia_porcellus
ENSPPRG00000007571	-	99	88.690	ENSCCAG00000011754	-	99	88.690	Cebus_capucinus
ENSPPRG00000007571	-	99	90.193	ENSCATG00000030661	-	99	90.193	Cercocebus_atys
ENSPPRG00000007571	-	99	87.569	ENSCLAG00000010476	-	99	83.077	Chinchilla_lanigera
ENSPPRG00000007571	-	99	89.917	ENSCSAG00000012712	-	99	86.689	Chlorocebus_sabaeus
ENSPPRG00000007571	-	99	75.207	ENSCPBG00000003204	-	99	69.376	Chrysemys_picta_bellii
ENSPPRG00000007571	-	99	90.331	ENSCANG00000017939	-	99	90.331	Colobus_angolensis_palliatus
ENSPPRG00000007571	-	100	82.944	ENSCGRG00001020184	Rad54b	100	78.861	Cricetulus_griseus_chok1gshd
ENSPPRG00000007571	-	100	81.568	ENSCGRG00000016752	Rad54b	100	77.547	Cricetulus_griseus_crigri
ENSPPRG00000007571	-	99	58.095	ENSCSEG00000001601	rad54b	98	61.538	Cynoglossus_semilaevis
ENSPPRG00000007571	-	99	61.202	ENSCVAG00000009200	rad54b	99	57.050	Cyprinodon_variegatus
ENSPPRG00000007571	-	100	58.095	ENSDARG00000092134	rad54b	100	60.983	Danio_rerio
ENSPPRG00000007571	-	99	87.328	ENSDNOG00000015535	-	99	83.991	Dasypus_novemcinctus
ENSPPRG00000007571	-	99	87.724	ENSDORG00000002492	Rad54b	100	82.895	Dipodomys_ordii
ENSPPRG00000007571	-	83	87.252	ENSETEG00000010605	-	100	81.266	Echinops_telfairi
ENSPPRG00000007571	-	99	50.340	ENSEBUG00000009104	rad54b	98	46.939	Eptatretus_burgeri
ENSPPRG00000007571	-	100	90.771	ENSEASG00005004021	-	100	88.136	Equus_asinus_asinus
ENSPPRG00000007571	-	100	91.047	ENSECAG00000021949	-	99	88.487	Equus_caballus
ENSPPRG00000007571	-	88	85.093	ENSEEUG00000008056	-	83	85.093	Erinaceus_europaeus
ENSPPRG00000007571	-	99	58.573	ENSELUG00000009287	rad54b	99	53.178	Esox_lucius
ENSPPRG00000007571	-	100	99.036	ENSFCAG00000015513	-	100	99.036	Felis_catus
ENSPPRG00000007571	-	99	73.967	ENSFALG00000005467	-	99	67.497	Ficedula_albicollis
ENSPPRG00000007571	-	98	87.571	ENSFDAG00000020541	-	100	84.505	Fukomys_damarensis
ENSPPRG00000007571	-	99	57.609	ENSFHEG00000014382	rad54b	91	56.287	Fundulus_heteroclitus
ENSPPRG00000007571	-	99	56.233	ENSGMOG00000014774	rad54b	98	56.713	Gadus_morhua
ENSPPRG00000007571	-	99	73.554	ENSGALG00000043597	RAD54B	99	67.541	Gallus_gallus
ENSPPRG00000007571	-	99	59.647	ENSGAFG00000007901	rad54b	99	55.229	Gambusia_affinis
ENSPPRG00000007571	-	99	59.647	ENSGACG00000009128	rad54b	99	55.076	Gasterosteus_aculeatus
ENSPPRG00000007571	-	99	74.827	ENSGAGG00000018747	-	99	69.290	Gopherus_agassizii
ENSPPRG00000007571	-	100	90.496	ENSGGOG00000023516	-	100	86.937	Gorilla_gorilla
ENSPPRG00000007571	-	99	59.209	ENSHBUG00000016017	rad54b	99	54.234	Haplochromis_burtoni
ENSPPRG00000007571	-	100	86.202	ENSHGLG00000008263	RAD54B	99	83.007	Heterocephalus_glaber_female
ENSPPRG00000007571	-	100	85.095	ENSHGLG00100008108	-	99	82.251	Heterocephalus_glaber_male
ENSPPRG00000007571	-	99	58.069	ENSHCOG00000004764	rad54b	98	56.404	Hippocampus_comes
ENSPPRG00000007571	-	100	58.165	ENSIPUG00000018531	rad54b	99	52.997	Ictalurus_punctatus
ENSPPRG00000007571	-	99	88.472	ENSSTOG00000010791	-	99	84.106	Ictidomys_tridecemlineatus
ENSPPRG00000007571	-	100	85.537	ENSJJAG00000010314	Rad54b	100	81.031	Jaculus_jaculus
ENSPPRG00000007571	-	99	58.356	ENSKMAG00000004744	rad54b	99	53.989	Kryptolebias_marmoratus
ENSPPRG00000007571	-	99	69.103	ENSLACG00000000859	-	100	68.842	Latimeria_chalumnae
ENSPPRG00000007571	-	99	64.325	ENSLOCG00000010100	rad54b	98	62.260	Lepisosteus_oculatus
ENSPPRG00000007571	-	100	88.567	ENSLAFG00000015315	-	100	85.167	Loxodonta_africana
ENSPPRG00000007571	-	99	89.917	ENSMFAG00000031629	-	99	89.917	Macaca_fascicularis
ENSPPRG00000007571	-	99	89.917	ENSMMUG00000005659	-	99	86.689	Macaca_mulatta
ENSPPRG00000007571	-	99	89.917	ENSMNEG00000016408	-	99	86.689	Macaca_nemestrina
ENSPPRG00000007571	-	99	90.331	ENSMLEG00000006946	-	99	86.909	Mandrillus_leucophaeus
ENSPPRG00000007571	-	99	59.838	ENSMAMG00000012269	rad54b	99	55.340	Mastacembelus_armatus
ENSPPRG00000007571	-	99	59.290	ENSMZEG00005005281	rad54b	95	59.698	Maylandia_zebra
ENSPPRG00000007571	-	99	73.554	ENSMGAG00000012024	-	99	67.760	Meleagris_gallopavo
ENSPPRG00000007571	-	100	82.806	ENSMAUG00000013586	Rad54b	100	78.313	Mesocricetus_auratus
ENSPPRG00000007571	-	99	89.931	ENSMICG00000000754	-	99	83.846	Microcebus_murinus
ENSPPRG00000007571	-	100	81.456	ENSMOCG00000020035	Rad54b	99	77.681	Microtus_ochrogaster
ENSPPRG00000007571	-	99	57.916	ENSMMOG00000003394	rad54b	99	53.571	Mola_mola
ENSPPRG00000007571	-	99	79.310	ENSMODG00000007343	-	99	77.295	Monodelphis_domestica
ENSPPRG00000007571	-	89	59.535	ENSMALG00000001520	rad54b	99	59.535	Monopterus_albus
ENSPPRG00000007571	-	100	83.081	MGP_CAROLIEiJ_G0025810	Rad54b	100	78.970	Mus_caroli
ENSPPRG00000007571	-	100	82.920	ENSMUSG00000078773	Rad54b	100	78.509	Mus_musculus
ENSPPRG00000007571	-	100	83.333	MGP_PahariEiJ_G0023933	Rad54b	100	79.057	Mus_pahari
ENSPPRG00000007571	-	100	83.884	MGP_SPRETEiJ_G0026758	Rad54b	100	79.276	Mus_spretus
ENSPPRG00000007571	-	100	93.251	ENSMPUG00000008878	-	100	93.210	Mustela_putorius_furo
ENSPPRG00000007571	-	99	90.483	ENSMLUG00000008953	-	99	85.307	Myotis_lucifugus
ENSPPRG00000007571	-	100	86.339	ENSNGAG00000017537	Rad54b	100	82.135	Nannospalax_galili
ENSPPRG00000007571	-	99	59.371	ENSNBRG00000013394	rad54b	99	54.962	Neolamprologus_brichardi
ENSPPRG00000007571	-	99	90.608	ENSNLEG00000003062	-	99	90.608	Nomascus_leucogenys
ENSPPRG00000007571	-	78	77.640	ENSMEUG00000012426	-	71	74.590	Notamacropus_eugenii
ENSPPRG00000007571	-	94	87.206	ENSODEG00000002650	-	96	86.043	Octodon_degus
ENSPPRG00000007571	-	100	86.088	ENSODEG00000019564	-	100	82.127	Octodon_degus
ENSPPRG00000007571	-	99	59.644	ENSONIG00000006067	rad54b	99	55.338	Oreochromis_niloticus
ENSPPRG00000007571	-	100	77.029	ENSOANG00000011348	-	100	76.361	Ornithorhynchus_anatinus
ENSPPRG00000007571	-	100	88.017	ENSOCUG00000016478	-	99	83.443	Oryctolagus_cuniculus
ENSPPRG00000007571	-	99	60.952	ENSORLG00000008918	rad54b	99	62.906	Oryzias_latipes
ENSPPRG00000007571	-	89	63.060	ENSORLG00020012171	rad54b	99	63.060	Oryzias_latipes_hni
ENSPPRG00000007571	-	99	60.541	ENSORLG00015018536	rad54b	84	61.097	Oryzias_latipes_hsok
ENSPPRG00000007571	-	99	60.000	ENSOMEG00000004345	rad54b	99	59.949	Oryzias_melastigma
ENSPPRG00000007571	-	99	88.828	ENSOGAG00000007854	-	99	85.291	Otolemur_garnettii
ENSPPRG00000007571	-	100	89.669	ENSOARG00000007691	-	100	89.053	Ovis_aries
ENSPPRG00000007571	-	99	88.812	ENSPPAG00000029572	-	99	85.919	Pan_paniscus
ENSPPRG00000007571	-	100	99.449	ENSPTIG00000012670	-	100	99.449	Panthera_tigris_altaica
ENSPPRG00000007571	-	99	90.608	ENSPTRG00000020427	-	99	90.608	Pan_troglodytes
ENSPPRG00000007571	-	99	90.331	ENSPANG00000019566	-	99	87.019	Papio_anubis
ENSPPRG00000007571	-	99	63.260	ENSPKIG00000014974	rad54b	99	58.651	Paramormyrops_kingsleyae
ENSPPRG00000007571	-	99	72.727	ENSPSIG00000002383	-	97	72.682	Pelodiscus_sinensis
ENSPPRG00000007571	-	100	83.356	ENSPEMG00000012133	Rad54b	100	79.409	Peromyscus_maniculatus_bairdii
ENSPPRG00000007571	-	99	57.687	ENSPMAG00000002916	rad54b	99	58.323	Petromyzon_marinus
ENSPPRG00000007571	-	99	80.138	ENSPCIG00000020151	-	94	77.903	Phascolarctos_cinereus
ENSPPRG00000007571	-	99	60.462	ENSPFOG00000023411	rad54b	99	55.461	Poecilia_formosa
ENSPPRG00000007571	-	99	60.734	ENSPLAG00000010430	rad54b	99	55.567	Poecilia_latipinna
ENSPPRG00000007571	-	99	60.326	ENSPMEG00000016873	rad54b	99	55.355	Poecilia_mexicana
ENSPPRG00000007571	-	99	60.164	ENSPREG00000018443	rad54b	99	55.809	Poecilia_reticulata
ENSPPRG00000007571	-	99	90.331	ENSPPYG00000018750	-	99	87.019	Pongo_abelii
ENSPPRG00000007571	-	99	90.069	ENSPCOG00000026845	-	99	90.069	Propithecus_coquereli
ENSPPRG00000007571	-	99	90.483	ENSPVAG00000000261	-	92	90.013	Pteropus_vampyrus
ENSPPRG00000007571	-	99	59.586	ENSPNYG00000018303	rad54b	95	59.975	Pundamilia_nyererei
ENSPPRG00000007571	-	99	59.048	ENSPNAG00000000295	rad54b	99	53.887	Pygocentrus_nattereri
ENSPPRG00000007571	-	100	80.880	ENSRNOG00000039949	Rad54b	100	75.904	Rattus_norvegicus
ENSPPRG00000007571	-	99	89.503	ENSRBIG00000020419	-	99	86.359	Rhinopithecus_bieti
ENSPPRG00000007571	-	99	89.503	ENSRROG00000039897	-	99	86.359	Rhinopithecus_roxellana
ENSPPRG00000007571	-	77	42.504	YBR073W	RDH54	61	42.504	Saccharomyces_cerevisiae
ENSPPRG00000007571	-	99	88.414	ENSSBOG00000028501	-	99	85.620	Saimiri_boliviensis_boliviensis
ENSPPRG00000007571	-	99	80.221	ENSSHAG00000017038	-	99	73.275	Sarcophilus_harrisii
ENSPPRG00000007571	-	81	65.136	ENSSFOG00015008483	rad54b	91	65.136	Scleropages_formosus
ENSPPRG00000007571	-	99	58.333	ENSSMAG00000018659	rad54b	100	53.680	Scophthalmus_maximus
ENSPPRG00000007571	-	98	59.697	ENSSDUG00000001122	rad54b	98	54.237	Seriola_dumerili
ENSPPRG00000007571	-	99	59.294	ENSSLDG00000013787	rad54b	99	53.983	Seriola_lalandi_dorsalis
ENSPPRG00000007571	-	99	73.140	ENSSPUG00000016497	-	99	67.798	Sphenodon_punctatus
ENSPPRG00000007571	-	99	59.401	ENSSPAG00000012800	rad54b	99	55.060	Stegastes_partitus
ENSPPRG00000007571	-	99	89.807	ENSSSCG00000006101	-	99	89.824	Sus_scrofa
ENSPPRG00000007571	-	99	73.901	ENSTGUG00000011880	-	99	67.243	Taeniopygia_guttata
ENSPPRG00000007571	-	99	59.341	ENSTRUG00000010015	rad54b	99	53.270	Takifugu_rubripes
ENSPPRG00000007571	-	99	85.793	ENSTTRG00000006312	-	100	83.974	Tursiops_truncatus
ENSPPRG00000007571	-	100	95.041	ENSUMAG00000016401	-	100	93.853	Ursus_maritimus
ENSPPRG00000007571	-	100	90.220	ENSVPAG00000003157	-	100	86.169	Vicugna_pacos
ENSPPRG00000007571	-	99	59.259	ENSXETG00000025924	rad54b	99	60.224	Xenopus_tropicalis
ENSPPRG00000007571	-	99	59.345	ENSXMAG00000013141	rad54b	99	55.229	Xiphophorus_maculatus