EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000008004 (Gene tree)
Gene ID: 109252141
Gene Symbol: -
Alias: -
Full Name: matrin 3
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 30160 bases
Position: chrKV860370.1:2482096-2512255
Accession: 109252141
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000015309	RRM_5	PF13893.6	6.2e-07	1	2
ENSPPRP00000015309	RRM_5	PF13893.6	6.2e-07	2	2
ENSPPRP00000015291	RRM_5	PF13893.6	1.5e-06	1	1
ENSPPRP00000015324	RRM_5	PF13893.6	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000013493	-	1686	-	ENSPPRP00000015309	561 (aa)	-	UPI0002C56406
ENSPPRT00000013485	-	858	-	ENSPPRP00000015292	285 (aa)	-	-
ENSPPRT00000013477	-	2391	-	ENSPPRP00000015291	796 (aa)	-	-
ENSPPRT00000013503	-	4022	XM_019424323	ENSPPRP00000015324	849 (aa)	XP_019279868	UPI0001DE9807

Gene Model

Click here to download ENSPPRG00000008004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000008004's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000008004	-	100	98.995	ENSG00000015479	MATR3	100	100.000	Homo_sapiens
ENSPPRG00000008004	-	99	94.643	ENSAMEG00000011347	-	100	94.643	Ailuropoda_melanoleuca
ENSPPRG00000008004	-	100	77.863	ENSAPLG00000008118	-	100	76.149	Anas_platyrhynchos
ENSPPRG00000008004	-	99	72.389	ENSACAG00000016233	-	99	72.235	Anolis_carolinensis
ENSPPRG00000008004	-	90	72.671	ENSANAG00000024654	-	99	72.671	Aotus_nancymaae
ENSPPRG00000008004	-	100	98.351	ENSANAG00000022951	-	100	98.351	Aotus_nancymaae
ENSPPRG00000008004	-	79	48.148	ENSAMXG00000010681	matr3l1.1	72	48.148	Astyanax_mexicanus
ENSPPRG00000008004	-	67	38.095	ENSAMXG00000010685	matr3l1.1	84	38.095	Astyanax_mexicanus
ENSPPRG00000008004	-	100	93.720	ENSBTAG00000006756	MATR3	100	93.720	Bos_taurus
ENSPPRG00000008004	-	100	97.683	ENSCJAG00000006888	-	100	97.683	Callithrix_jacchus
ENSPPRG00000008004	-	100	99.529	ENSCAFG00000001345	MATR3	100	99.529	Canis_familiaris
ENSPPRG00000008004	-	99	97.535	ENSCAFG00020010504	-	98	99.722	Canis_lupus_dingo
ENSPPRG00000008004	-	100	99.411	ENSCHIG00000025746	-	100	99.411	Capra_hircus
ENSPPRG00000008004	-	100	98.492	ENSTSYG00000011028	-	100	98.492	Carlito_syrichta
ENSPPRG00000008004	-	100	98.469	ENSCPOG00000014076	-	100	98.469	Cavia_porcellus
ENSPPRG00000008004	-	100	98.704	ENSCCAG00000025074	-	100	98.704	Cebus_capucinus
ENSPPRG00000008004	-	100	98.396	ENSCATG00000041304	-	100	98.396	Cercocebus_atys
ENSPPRG00000008004	-	100	98.704	ENSCLAG00000015998	-	100	98.704	Chinchilla_lanigera
ENSPPRG00000008004	-	100	99.058	ENSCSAG00000013075	-	100	99.058	Chlorocebus_sabaeus
ENSPPRG00000008004	-	100	76.889	ENSCPBG00000006303	-	100	76.425	Chrysemys_picta_bellii
ENSPPRG00000008004	-	100	97.644	ENSCANG00000028224	-	100	97.644	Colobus_angolensis_palliatus
ENSPPRG00000008004	-	100	98.469	ENSCGRG00001020227	Matr3	100	98.469	Cricetulus_griseus_chok1gshd
ENSPPRG00000008004	-	100	98.351	ENSCGRG00000011298	Matr3	100	98.351	Cricetulus_griseus_crigri
ENSPPRG00000008004	-	97	32.143	ENSCSEG00000012682	matr3l1.1	93	32.143	Cynoglossus_semilaevis
ENSPPRG00000008004	-	79	39.806	ENSCVAG00000005337	matr3l1.1	78	38.835	Cyprinodon_variegatus
ENSPPRG00000008004	-	100	93.548	ENSDNOG00000037723	-	100	93.548	Dasypus_novemcinctus
ENSPPRG00000008004	-	100	99.529	ENSEASG00005020857	-	100	99.529	Equus_asinus_asinus
ENSPPRG00000008004	-	100	99.529	ENSECAG00000012882	MATR3	100	99.529	Equus_caballus
ENSPPRG00000008004	-	76	42.718	ENSELUG00000021651	si:ch211-271b14.1	83	42.718	Esox_lucius
ENSPPRG00000008004	-	73	49.123	ENSELUG00000021848	matr3l1.1	74	51.515	Esox_lucius
ENSPPRG00000008004	-	100	99.882	ENSFCAG00000021911	-	100	99.882	Felis_catus
ENSPPRG00000008004	-	100	76.696	ENSFALG00000003071	-	100	76.316	Ficedula_albicollis
ENSPPRG00000008004	-	100	97.998	ENSFDAG00000017675	-	100	97.998	Fukomys_damarensis
ENSPPRG00000008004	-	100	77.985	ENSGALG00000002478	MATR3	100	76.425	Gallus_gallus
ENSPPRG00000008004	-	100	76.721	ENSGAGG00000011386	-	100	76.425	Gopherus_agassizii
ENSPPRG00000008004	-	100	99.058	ENSGGOG00000007308	-	100	99.058	Gorilla_gorilla
ENSPPRG00000008004	-	100	99.176	ENSHGLG00000004673	MATR3	100	99.176	Heterocephalus_glaber_female
ENSPPRG00000008004	-	91	98.630	ENSHGLG00100006442	-	100	98.630	Heterocephalus_glaber_male
ENSPPRG00000008004	-	58	37.222	ENSHCOG00000013223	matr3l1.1	83	30.254	Hippocampus_comes
ENSPPRG00000008004	-	100	99.293	ENSSTOG00000014746	-	100	99.293	Ictidomys_tridecemlineatus
ENSPPRG00000008004	-	91	69.006	ENSJJAG00000011022	-	100	69.201	Jaculus_jaculus
ENSPPRG00000008004	-	100	97.527	ENSJJAG00000021710	-	100	97.527	Jaculus_jaculus
ENSPPRG00000008004	-	65	41.489	ENSLBEG00000018267	matr3l1.1	86	37.607	Labrus_bergylta
ENSPPRG00000008004	-	99	56.338	ENSLACG00000006743	-	99	57.484	Latimeria_chalumnae
ENSPPRG00000008004	-	100	98.574	ENSMFAG00000000634	-	100	98.574	Macaca_fascicularis
ENSPPRG00000008004	-	63	96.825	ENSMMUG00000015963	-	99	96.825	Macaca_mulatta
ENSPPRG00000008004	-	100	99.246	ENSMMUG00000016741	MATR3	100	99.246	Macaca_mulatta
ENSPPRG00000008004	-	100	99.176	ENSMNEG00000042856	-	100	99.176	Macaca_nemestrina
ENSPPRG00000008004	-	100	99.176	ENSMLEG00000041178	-	100	99.176	Mandrillus_leucophaeus
ENSPPRG00000008004	-	74	48.235	ENSMAMG00000013840	matr3l1.1	62	41.880	Mastacembelus_armatus
ENSPPRG00000008004	-	100	77.875	ENSMGAG00000001331	-	100	76.206	Meleagris_gallopavo
ENSPPRG00000008004	-	100	98.115	ENSMAUG00000011647	Matr3	100	98.115	Mesocricetus_auratus
ENSPPRG00000008004	-	95	97.383	ENSMICG00000012438	-	99	97.222	Microcebus_murinus
ENSPPRG00000008004	-	100	98.233	ENSMOCG00000015711	Matr3	100	98.233	Microtus_ochrogaster
ENSPPRG00000008004	-	100	91.335	ENSMODG00000011925	-	99	90.749	Monodelphis_domestica
ENSPPRG00000008004	-	100	98.115	MGP_CAROLIEiJ_G0022108	Matr3	100	98.115	Mus_caroli
ENSPPRG00000008004	-	100	98.115	ENSMUSG00000037236	Matr3	100	98.115	Mus_musculus
ENSPPRG00000008004	-	100	98.233	MGP_PahariEiJ_G0018842	Matr3	100	98.233	Mus_pahari
ENSPPRG00000008004	-	100	97.762	MGP_SPRETEiJ_G0023020	Matr3	100	97.762	Mus_spretus
ENSPPRG00000008004	-	100	98.264	ENSMPUG00000009297	-	100	98.264	Mustela_putorius_furo
ENSPPRG00000008004	-	100	98.120	ENSMLUG00000005798	-	99	98.120	Myotis_lucifugus
ENSPPRG00000008004	-	100	98.469	ENSNGAG00000017452	Matr3	100	98.469	Nannospalax_galili
ENSPPRG00000008004	-	100	99.176	ENSNLEG00000009093	-	100	99.176	Nomascus_leucogenys
ENSPPRG00000008004	-	99	90.868	ENSOPRG00000016511	-	100	90.508	Ochotona_princeps
ENSPPRG00000008004	-	100	98.587	ENSODEG00000003015	-	100	98.587	Octodon_degus
ENSPPRG00000008004	-	100	99.058	ENSOCUG00000026311	MATR3	100	99.058	Oryctolagus_cuniculus
ENSPPRG00000008004	-	70	37.879	ENSORLG00020009362	matr3l1.1	80	33.333	Oryzias_latipes_hni
ENSPPRG00000008004	-	64	48.148	ENSORLG00015018551	matr3l1.1	80	38.931	Oryzias_latipes_hsok
ENSPPRG00000008004	-	67	40.351	ENSOMEG00000022287	matr3l1.1	91	36.429	Oryzias_melastigma
ENSPPRG00000008004	-	100	99.411	ENSOGAG00000010607	-	100	99.411	Otolemur_garnettii
ENSPPRG00000008004	-	100	99.411	ENSOARG00000016931	-	99	99.411	Ovis_aries
ENSPPRG00000008004	-	100	90.909	ENSPPAG00000026720	-	99	92.909	Pan_paniscus
ENSPPRG00000008004	-	100	98.574	ENSPPAG00000001418	-	100	98.574	Pan_paniscus
ENSPPRG00000008004	-	98	99.093	ENSPTIG00000010711	-	100	100.000	Panthera_tigris_altaica
ENSPPRG00000008004	-	100	98.574	ENSPTRG00000017294	MATR3	100	98.574	Pan_troglodytes
ENSPPRG00000008004	-	99	97.133	ENSPANG00000032489	-	99	98.545	Papio_anubis
ENSPPRG00000008004	-	100	98.574	ENSPANG00000012018	-	100	98.574	Papio_anubis
ENSPPRG00000008004	-	95	34.982	ENSPKIG00000000333	matr3l1.1	58	38.710	Paramormyrops_kingsleyae
ENSPPRG00000008004	-	100	77.024	ENSPSIG00000014598	-	100	76.206	Pelodiscus_sinensis
ENSPPRG00000008004	-	100	97.880	ENSPEMG00000020679	Matr3	100	97.880	Peromyscus_maniculatus_bairdii
ENSPPRG00000008004	-	100	93.868	ENSPPYG00000015835	-	100	93.868	Pongo_abelii
ENSPPRG00000008004	-	100	98.744	ENSPCOG00000025718	-	100	98.744	Propithecus_coquereli
ENSPPRG00000008004	-	99	93.349	ENSPVAG00000015431	-	100	93.757	Pteropus_vampyrus
ENSPPRG00000008004	-	52	46.512	ENSPNYG00000015855	-	86	46.512	Pundamilia_nyererei
ENSPPRG00000008004	-	100	97.644	ENSRNOG00000019875	Matr3	100	97.644	Rattus_norvegicus
ENSPPRG00000008004	-	100	98.574	ENSRBIG00000034713	-	100	98.574	Rhinopithecus_bieti
ENSPPRG00000008004	-	100	98.574	ENSRROG00000039415	-	100	98.826	Rhinopithecus_roxellana
ENSPPRG00000008004	-	100	97.527	ENSRROG00000043949	-	100	97.527	Rhinopithecus_roxellana
ENSPPRG00000008004	-	100	98.618	ENSSBOG00000030159	-	100	98.618	Saimiri_boliviensis_boliviensis
ENSPPRG00000008004	-	100	91.569	ENSSHAG00000010331	-	99	90.984	Sarcophilus_harrisii
ENSPPRG00000008004	-	61	55.556	ENSSDUG00000015369	matr3l1.1	59	51.515	Seriola_dumerili
ENSPPRG00000008004	-	100	75.873	ENSSPUG00000019236	-	100	75.741	Sphenodon_punctatus
ENSPPRG00000008004	-	100	99.529	ENSSSCG00000014343	-	100	99.529	Sus_scrofa
ENSPPRG00000008004	-	100	76.696	ENSTGUG00000014568	MATR3	100	75.794	Taeniopygia_guttata
ENSPPRG00000008004	-	51	37.327	ENSTRUG00000001692	-	83	35.317	Takifugu_rubripes
ENSPPRG00000008004	-	61	57.143	ENSTNIG00000003166	matr3l1.1	87	57.143	Tetraodon_nigroviridis
ENSPPRG00000008004	-	90	99.861	ENSUAMG00000000097	-	97	99.861	Ursus_americanus
ENSPPRG00000008004	-	100	99.411	ENSUMAG00000015808	-	100	99.411	Ursus_maritimus
ENSPPRG00000008004	-	100	93.660	ENSVPAG00000006337	-	100	93.660	Vicugna_pacos
ENSPPRG00000008004	-	100	99.764	ENSVVUG00000020287	-	100	99.764	Vulpes_vulpes
ENSPPRG00000008004	-	100	52.495	ENSXETG00000003838	matr3	100	51.751	Xenopus_tropicalis
ENSPPRG00000008004	-	78	31.778	ENSXMAG00000014107	-	65	31.569	Xiphophorus_maculatus