EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000008497 (Gene tree)
Gene ID: 109253384
Gene Symbol: PRPF6
Alias: -
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 56093 bases
Position: chrKV860377.1:360212-416304
Accession: 109253384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000016071	PRP1_N	PF06424.12	1.7e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000014296	PRPF6-201	2826	XM_019426236	ENSPPRP00000016071	941 (aa)	XP_019281781	UPI000904F30B

Gene Model

Click here to download ENSPPRG00000008497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000008497's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000008497	PRPF6	100	97.450	ENSG00000101161	PRPF6	100	97.450	Homo_sapiens
ENSPPRG00000008497	PRPF6	100	92.667	ENSAPOG00000010395	prpf6	96	93.092	Acanthochromis_polyacanthus
ENSPPRG00000008497	PRPF6	100	98.408	ENSAMEG00000001916	PRPF6	99	98.408	Ailuropoda_melanoleuca
ENSPPRG00000008497	PRPF6	100	92.667	ENSACIG00000019862	prpf6	96	93.092	Amphilophus_citrinellus
ENSPPRG00000008497	PRPF6	100	92.667	ENSAOCG00000012988	prpf6	96	93.092	Amphiprion_ocellaris
ENSPPRG00000008497	PRPF6	100	86.079	ENSAPEG00000008301	prpf6	100	86.504	Amphiprion_percula
ENSPPRG00000008497	PRPF6	100	92.349	ENSATEG00000005581	prpf6	96	92.774	Anabas_testudineus
ENSPPRG00000008497	PRPF6	100	97.875	ENSACAG00000006464	PRPF6	95	97.875	Anolis_carolinensis
ENSPPRG00000008497	PRPF6	100	97.556	ENSANAG00000012661	PRPF6	100	98.233	Aotus_nancymaae
ENSPPRG00000008497	PRPF6	100	92.349	ENSACLG00000025875	prpf6	96	92.774	Astatotilapia_calliptera
ENSPPRG00000008497	PRPF6	99	92.872	ENSAMXG00000001929	prpf6	96	93.298	Astyanax_mexicanus
ENSPPRG00000008497	PRPF6	100	99.469	ENSBTAG00000011656	PRPF6	100	99.469	Bos_taurus
ENSPPRG00000008497	PRPF6	100	97.556	ENSCJAG00000010616	PRPF6	100	97.556	Callithrix_jacchus
ENSPPRG00000008497	PRPF6	100	99.469	ENSCAFG00000013165	PRPF6	100	99.469	Canis_familiaris
ENSPPRG00000008497	PRPF6	100	99.469	ENSCAFG00020002050	PRPF6	100	99.469	Canis_lupus_dingo
ENSPPRG00000008497	PRPF6	100	99.469	ENSCHIG00000018187	PRPF6	100	99.469	Capra_hircus
ENSPPRG00000008497	PRPF6	100	98.300	ENSTSYG00000007814	PRPF6	100	98.300	Carlito_syrichta
ENSPPRG00000008497	PRPF6	97	97.165	ENSCAPG00000015077	PRPF6	100	97.165	Cavia_aperea
ENSPPRG00000008497	PRPF6	100	98.512	ENSCPOG00000007518	PRPF6	100	98.512	Cavia_porcellus
ENSPPRG00000008497	PRPF6	100	94.261	ENSCCAG00000024564	PRPF6	100	94.368	Cebus_capucinus
ENSPPRG00000008497	PRPF6	100	97.556	ENSCATG00000037473	PRPF6	100	97.556	Cercocebus_atys
ENSPPRG00000008497	PRPF6	100	94.580	ENSCLAG00000003854	PRPF6	100	94.580	Chinchilla_lanigera
ENSPPRG00000008497	PRPF6	100	92.291	ENSCSAG00000016742	PRPF6	100	92.291	Chlorocebus_sabaeus
ENSPPRG00000008497	PRPF6	85	81.138	ENSCHOG00000003315	-	100	81.138	Choloepus_hoffmanni
ENSPPRG00000008497	PRPF6	100	98.087	ENSCPBG00000013964	PRPF6	96	98.087	Chrysemys_picta_bellii
ENSPPRG00000008497	PRPF6	99	73.784	ENSCING00000008817	-	99	73.784	Ciona_intestinalis
ENSPPRG00000008497	PRPF6	100	97.343	ENSCANG00000038230	PRPF6	100	97.343	Colobus_angolensis_palliatus
ENSPPRG00000008497	PRPF6	100	98.618	ENSCGRG00001022666	Prpf6	100	98.618	Cricetulus_griseus_chok1gshd
ENSPPRG00000008497	PRPF6	100	86.929	ENSCSEG00000018561	prpf6	100	87.354	Cynoglossus_semilaevis
ENSPPRG00000008497	PRPF6	100	92.667	ENSCVAG00000010550	prpf6	96	93.092	Cyprinodon_variegatus
ENSPPRG00000008497	PRPF6	100	92.561	ENSDARG00000091367	prpf6	99	92.986	Danio_rerio
ENSPPRG00000008497	PRPF6	100	98.193	ENSDNOG00000040544	PRPF6	100	98.193	Dasypus_novemcinctus
ENSPPRG00000008497	PRPF6	91	97.664	ENSDORG00000005406	Prpf6	100	97.664	Dipodomys_ordii
ENSPPRG00000008497	PRPF6	99	72.121	FBgn0036828	CG6841	98	72.425	Drosophila_melanogaster
ENSPPRG00000008497	PRPF6	85	96.053	ENSETEG00000004447	PRPF6	85	96.053	Echinops_telfairi
ENSPPRG00000008497	PRPF6	99	87.169	ENSEBUG00000008835	prpf6	99	87.169	Eptatretus_burgeri
ENSPPRG00000008497	PRPF6	100	99.150	ENSEASG00005023115	PRPF6	100	99.150	Equus_asinus_asinus
ENSPPRG00000008497	PRPF6	100	94.899	ENSECAG00000013983	PRPF6	100	94.899	Equus_caballus
ENSPPRG00000008497	PRPF6	90	100.000	ENSEEUG00000000180	PRPF6	82	100.000	Erinaceus_europaeus
ENSPPRG00000008497	PRPF6	100	91.286	ENSELUG00000001945	prpf6	93	91.286	Esox_lucius
ENSPPRG00000008497	PRPF6	100	99.894	ENSFCAG00000001183	PRPF6	100	99.894	Felis_catus
ENSPPRG00000008497	PRPF6	100	90.436	ENSFALG00000006046	-	97	90.436	Ficedula_albicollis
ENSPPRG00000008497	PRPF6	100	98.087	ENSFALG00000010326	-	97	98.087	Ficedula_albicollis
ENSPPRG00000008497	PRPF6	100	97.024	ENSFDAG00000006451	PRPF6	100	98.413	Fukomys_damarensis
ENSPPRG00000008497	PRPF6	100	93.305	ENSFHEG00000000560	prpf6	96	93.305	Fundulus_heteroclitus
ENSPPRG00000008497	PRPF6	100	89.218	ENSGMOG00000015622	prpf6	99	89.218	Gadus_morhua
ENSPPRG00000008497	PRPF6	100	97.875	ENSGALG00000006001	PRPF6	100	97.875	Gallus_gallus
ENSPPRG00000008497	PRPF6	100	87.991	ENSGAFG00000021109	prpf6	96	88.417	Gambusia_affinis
ENSPPRG00000008497	PRPF6	100	91.180	ENSGACG00000002576	prpf6	99	91.180	Gasterosteus_aculeatus
ENSPPRG00000008497	PRPF6	100	97.981	ENSGAGG00000008653	PRPF6	96	97.981	Gopherus_agassizii
ENSPPRG00000008497	PRPF6	100	97.450	ENSGGOG00000016876	PRPF6	100	97.450	Gorilla_gorilla
ENSPPRG00000008497	PRPF6	100	92.349	ENSHBUG00000004496	prpf6	96	92.774	Haplochromis_burtoni
ENSPPRG00000008497	PRPF6	100	98.512	ENSHGLG00000009222	PRPF6	100	98.512	Heterocephalus_glaber_female
ENSPPRG00000008497	PRPF6	97	98.473	ENSHGLG00100016600	PRPF6	100	98.473	Heterocephalus_glaber_male
ENSPPRG00000008497	PRPF6	100	91.180	ENSHCOG00000011513	prpf6	96	91.605	Hippocampus_comes
ENSPPRG00000008497	PRPF6	100	93.411	ENSIPUG00000004912	prpf6	96	93.411	Ictalurus_punctatus
ENSPPRG00000008497	PRPF6	100	95.754	ENSSTOG00000002922	PRPF6	100	95.754	Ictidomys_tridecemlineatus
ENSPPRG00000008497	PRPF6	100	98.618	ENSJJAG00000000836	Prpf6	100	98.618	Jaculus_jaculus
ENSPPRG00000008497	PRPF6	100	92.455	ENSKMAG00000017800	prpf6	96	92.880	Kryptolebias_marmoratus
ENSPPRG00000008497	PRPF6	100	91.923	ENSLBEG00000012582	prpf6	96	91.923	Labrus_bergylta
ENSPPRG00000008497	PRPF6	100	94.687	ENSLOCG00000004827	prpf6	96	93.730	Lepisosteus_oculatus
ENSPPRG00000008497	PRPF6	100	97.662	ENSLAFG00000005272	PRPF6	100	97.662	Loxodonta_africana
ENSPPRG00000008497	PRPF6	100	97.343	ENSMFAG00000037542	PRPF6	100	97.343	Macaca_fascicularis
ENSPPRG00000008497	PRPF6	100	90.764	ENSMMUG00000015558	PRPF6	98	99.307	Macaca_mulatta
ENSPPRG00000008497	PRPF6	100	83.051	ENSMNEG00000045555	PRPF6	100	83.051	Macaca_nemestrina
ENSPPRG00000008497	PRPF6	100	92.455	ENSMAMG00000010718	prpf6	96	92.880	Mastacembelus_armatus
ENSPPRG00000008497	PRPF6	92	92.494	ENSMZEG00005026539	prpf6	98	92.494	Maylandia_zebra
ENSPPRG00000008497	PRPF6	100	92.038	ENSMZEG00005015261	-	99	92.463	Maylandia_zebra
ENSPPRG00000008497	PRPF6	97	98.037	ENSMGAG00000006634	PRPF6	100	98.037	Meleagris_gallopavo
ENSPPRG00000008497	PRPF6	100	98.512	ENSMAUG00000013969	Prpf6	100	98.512	Mesocricetus_auratus
ENSPPRG00000008497	PRPF6	87	98.054	ENSMICG00000017793	PRPF6	99	98.054	Microcebus_murinus
ENSPPRG00000008497	PRPF6	100	98.512	ENSMOCG00000001701	Prpf6	100	98.512	Microtus_ochrogaster
ENSPPRG00000008497	PRPF6	100	91.817	ENSMMOG00000020419	prpf6	100	92.242	Mola_mola
ENSPPRG00000008497	PRPF6	99	99.014	ENSMODG00000017051	PRPF6	99	99.014	Monodelphis_domestica
ENSPPRG00000008497	PRPF6	99	92.589	ENSMALG00000000089	prpf6	100	92.589	Monopterus_albus
ENSPPRG00000008497	PRPF6	100	91.923	MGP_CAROLIEiJ_G0024814	Prpf6	100	98.148	Mus_caroli
ENSPPRG00000008497	PRPF6	100	98.512	ENSMUSG00000002455	Prpf6	100	98.512	Mus_musculus
ENSPPRG00000008497	PRPF6	100	98.512	MGP_PahariEiJ_G0026262	Prpf6	100	98.512	Mus_pahari
ENSPPRG00000008497	PRPF6	100	98.512	MGP_SPRETEiJ_G0025741	Prpf6	100	98.512	Mus_spretus
ENSPPRG00000008497	PRPF6	91	98.927	ENSMPUG00000008673	PRPF6	99	98.927	Mustela_putorius_furo
ENSPPRG00000008497	PRPF6	100	98.618	ENSNGAG00000003365	Prpf6	100	98.618	Nannospalax_galili
ENSPPRG00000008497	PRPF6	100	92.455	ENSNBRG00000015025	prpf6	96	92.880	Neolamprologus_brichardi
ENSPPRG00000008497	PRPF6	100	97.343	ENSNLEG00000010208	PRPF6	100	97.343	Nomascus_leucogenys
ENSPPRG00000008497	PRPF6	100	88.735	ENSMEUG00000009824	-	90	88.735	Notamacropus_eugenii
ENSPPRG00000008497	PRPF6	100	92.561	ENSODEG00000004841	PRPF6	100	92.561	Octodon_degus
ENSPPRG00000008497	PRPF6	100	92.349	ENSONIG00000017406	prpf6	96	92.774	Oreochromis_niloticus
ENSPPRG00000008497	PRPF6	100	98.406	ENSOANG00000004920	PRPF6	100	98.406	Ornithorhynchus_anatinus
ENSPPRG00000008497	PRPF6	99	96.781	ENSOCUG00000014151	PRPF6	100	96.781	Oryctolagus_cuniculus
ENSPPRG00000008497	PRPF6	100	92.136	ENSORLG00000009592	prpf6	96	92.136	Oryzias_latipes
ENSPPRG00000008497	PRPF6	100	92.242	ENSORLG00020001458	prpf6	96	92.242	Oryzias_latipes_hni
ENSPPRG00000008497	PRPF6	100	92.242	ENSORLG00015018762	prpf6	96	92.242	Oryzias_latipes_hsok
ENSPPRG00000008497	PRPF6	100	91.923	ENSOMEG00000012174	prpf6	96	92.349	Oryzias_melastigma
ENSPPRG00000008497	PRPF6	100	90.870	ENSOGAG00000007573	PRPF6	100	90.870	Otolemur_garnettii
ENSPPRG00000008497	PRPF6	100	99.044	ENSOARG00000008776	PRPF6	99	99.044	Ovis_aries
ENSPPRG00000008497	PRPF6	100	97.450	ENSPPAG00000008686	PRPF6	100	97.450	Pan_paniscus
ENSPPRG00000008497	PRPF6	97	100.000	ENSPTIG00000011184	PRPF6	97	100.000	Panthera_tigris_altaica
ENSPPRG00000008497	PRPF6	100	97.450	ENSPTRG00000013765	PRPF6	100	97.450	Pan_troglodytes
ENSPPRG00000008497	PRPF6	100	97.024	ENSPANG00000024135	PRPF6	100	97.024	Papio_anubis
ENSPPRG00000008497	PRPF6	100	93.836	ENSPKIG00000005627	prpf6	99	94.261	Paramormyrops_kingsleyae
ENSPPRG00000008497	PRPF6	94	98.186	ENSPSIG00000007717	PRPF6	100	98.186	Pelodiscus_sinensis
ENSPPRG00000008497	PRPF6	100	90.127	ENSPMGG00000008925	prpf6	96	90.340	Periophthalmus_magnuspinnatus
ENSPPRG00000008497	PRPF6	100	98.406	ENSPEMG00000016036	Prpf6	100	98.406	Peromyscus_maniculatus_bairdii
ENSPPRG00000008497	PRPF6	99	88.629	ENSPMAG00000006144	prpf6	99	88.629	Petromyzon_marinus
ENSPPRG00000008497	PRPF6	100	98.512	ENSPCIG00000017909	PRPF6	100	98.512	Phascolarctos_cinereus
ENSPPRG00000008497	PRPF6	100	92.880	ENSPFOG00000006431	prpf6	96	93.305	Poecilia_formosa
ENSPPRG00000008497	PRPF6	100	92.774	ENSPLAG00000005974	prpf6	96	93.199	Poecilia_latipinna
ENSPPRG00000008497	PRPF6	100	92.986	ENSPMEG00000009977	prpf6	96	93.411	Poecilia_mexicana
ENSPPRG00000008497	PRPF6	100	92.880	ENSPREG00000017993	prpf6	92	93.305	Poecilia_reticulata
ENSPPRG00000008497	PRPF6	100	96.918	ENSPPYG00000011256	PRPF6	100	96.918	Pongo_abelii
ENSPPRG00000008497	PRPF6	95	99.673	ENSPCAG00000006536	PRPF6	88	99.673	Procavia_capensis
ENSPPRG00000008497	PRPF6	100	97.981	ENSPCOG00000016881	PRPF6	100	97.981	Propithecus_coquereli
ENSPPRG00000008497	PRPF6	100	92.986	ENSPVAG00000014316	PRPF6	100	92.986	Pteropus_vampyrus
ENSPPRG00000008497	PRPF6	100	76.008	ENSPNYG00000001939	prpf6	70	89.727	Pundamilia_nyererei
ENSPPRG00000008497	PRPF6	100	93.092	ENSPNAG00000015606	prpf6	96	93.518	Pygocentrus_nattereri
ENSPPRG00000008497	PRPF6	100	98.406	ENSRNOG00000051498	Prpf6	100	98.406	Rattus_norvegicus
ENSPPRG00000008497	PRPF6	100	97.343	ENSRBIG00000043613	PRPF6	100	97.343	Rhinopithecus_bieti
ENSPPRG00000008497	PRPF6	100	94.180	ENSRROG00000040969	PRPF6	98	97.924	Rhinopithecus_roxellana
ENSPPRG00000008497	PRPF6	91	93.426	ENSSBOG00000020632	PRPF6	93	93.426	Saimiri_boliviensis_boliviensis
ENSPPRG00000008497	PRPF6	100	98.512	ENSSHAG00000016810	PRPF6	100	98.512	Sarcophilus_harrisii
ENSPPRG00000008497	PRPF6	99	94.415	ENSSFOG00015020859	prpf6	100	94.844	Scleropages_formosus
ENSPPRG00000008497	PRPF6	100	91.711	ENSSMAG00000008112	prpf6	96	91.711	Scophthalmus_maximus
ENSPPRG00000008497	PRPF6	100	92.349	ENSSDUG00000016142	prpf6	96	92.774	Seriola_dumerili
ENSPPRG00000008497	PRPF6	100	92.349	ENSSLDG00000025283	prpf6	100	89.267	Seriola_lalandi_dorsalis
ENSPPRG00000008497	PRPF6	94	96.485	ENSSPUG00000018260	PRPF6	100	96.485	Sphenodon_punctatus
ENSPPRG00000008497	PRPF6	100	92.349	ENSSPAG00000015850	prpf6	96	92.774	Stegastes_partitus
ENSPPRG00000008497	PRPF6	100	98.725	ENSSSCG00000029119	PRPF6	100	98.639	Sus_scrofa
ENSPPRG00000008497	PRPF6	100	98.193	ENSTGUG00000007221	PRPF6	99	98.193	Taeniopygia_guttata
ENSPPRG00000008497	PRPF6	100	91.817	ENSTRUG00000002920	prpf6	96	92.242	Takifugu_rubripes
ENSPPRG00000008497	PRPF6	100	85.518	ENSTNIG00000017873	prpf6	100	85.941	Tetraodon_nigroviridis
ENSPPRG00000008497	PRPF6	89	98.343	ENSTBEG00000005348	PRPF6	85	98.343	Tupaia_belangeri
ENSPPRG00000008497	PRPF6	100	98.831	ENSTTRG00000013068	PRPF6	100	98.831	Tursiops_truncatus
ENSPPRG00000008497	PRPF6	98	97.826	ENSUMAG00000021631	PRPF6	98	97.826	Ursus_maritimus
ENSPPRG00000008497	PRPF6	100	99.469	ENSVVUG00000014948	PRPF6	100	99.469	Vulpes_vulpes
ENSPPRG00000008497	PRPF6	100	95.430	ENSXETG00000012054	prpf6	97	95.855	Xenopus_tropicalis
ENSPPRG00000008497	PRPF6	100	92.986	ENSXCOG00000008082	prpf6	96	93.411	Xiphophorus_couchianus
ENSPPRG00000008497	PRPF6	100	92.986	ENSXMAG00000015581	prpf6	96	93.411	Xiphophorus_maculatus