EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000009007 (Gene tree)
Gene ID: 109252795
Gene Symbol: RC3H1
Alias: -
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 48551 bases
Position: chrKV860276.1:15414550-15463100
Accession: 109252795
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000016799	zf-CCCH	PF00642.24	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000015060	RC3H1-201	8021	XM_019425318	ENSPPRP00000016799	1123 (aa)	XP_019280863	UPI00042BDF1E

Gene Model

Click here to download ENSPPRG00000009007's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000009007's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000009007	RC3H1	93	53.734	ENSPPRG00000008698	RC3H2	98	53.382

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000009007	RC3H1	100	97.333	ENSG00000135870	RC3H1	100	97.333	Homo_sapiens
ENSPPRG00000009007	RC3H1	100	97.173	ENSAMEG00000015657	RC3H1	100	97.173	Ailuropoda_melanoleuca
ENSPPRG00000009007	RC3H1	100	87.958	ENSAPLG00000005341	RC3H1	100	87.424	Anas_platyrhynchos
ENSPPRG00000009007	RC3H1	100	84.803	ENSACAG00000015271	RC3H1	100	84.427	Anolis_carolinensis
ENSPPRG00000009007	RC3H1	100	97.087	ENSANAG00000036716	RC3H1	100	97.087	Aotus_nancymaae
ENSPPRG00000009007	RC3H1	100	96.975	ENSBTAG00000052708	RC3H1	100	96.975	Bos_taurus
ENSPPRG00000009007	RC3H1	100	96.734	ENSCJAG00000009106	RC3H1	100	96.734	Callithrix_jacchus
ENSPPRG00000009007	RC3H1	100	97.261	ENSCAFG00000014434	RC3H1	100	97.261	Canis_familiaris
ENSPPRG00000009007	RC3H1	100	97.176	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSPPRG00000009007	RC3H1	100	97.240	ENSCHIG00000002873	RC3H1	100	97.240	Capra_hircus
ENSPPRG00000009007	RC3H1	99	95.141	ENSTSYG00000003913	RC3H1	99	95.141	Carlito_syrichta
ENSPPRG00000009007	RC3H1	100	91.262	ENSCPOG00000004349	RC3H1	100	90.997	Cavia_porcellus
ENSPPRG00000009007	RC3H1	100	94.528	ENSCCAG00000025652	RC3H1	100	94.616	Cebus_capucinus
ENSPPRG00000009007	RC3H1	100	96.823	ENSCATG00000033497	RC3H1	100	96.823	Cercocebus_atys
ENSPPRG00000009007	RC3H1	100	94.528	ENSCLAG00000011267	RC3H1	100	94.528	Chinchilla_lanigera
ENSPPRG00000009007	RC3H1	96	96.777	ENSCSAG00000011823	RC3H1	85	96.777	Chlorocebus_sabaeus
ENSPPRG00000009007	RC3H1	100	89.377	ENSCPBG00000014670	RC3H1	100	88.938	Chrysemys_picta_bellii
ENSPPRG00000009007	RC3H1	100	96.825	ENSCANG00000032120	RC3H1	100	96.825	Colobus_angolensis_palliatus
ENSPPRG00000009007	RC3H1	100	94.170	ENSCGRG00001020812	Rc3h1	100	93.728	Cricetulus_griseus_chok1gshd
ENSPPRG00000009007	RC3H1	100	94.170	ENSCGRG00000011952	Rc3h1	100	93.728	Cricetulus_griseus_crigri
ENSPPRG00000009007	RC3H1	55	95.645	ENSDNOG00000011494	RC3H1	99	95.645	Dasypus_novemcinctus
ENSPPRG00000009007	RC3H1	100	94.965	ENSDORG00000004855	Rc3h1	100	94.965	Dipodomys_ordii
ENSPPRG00000009007	RC3H1	82	97.365	ENSETEG00000012064	RC3H1	87	97.365	Echinops_telfairi
ENSPPRG00000009007	RC3H1	100	97.061	ENSEASG00005017000	RC3H1	100	97.061	Equus_asinus_asinus
ENSPPRG00000009007	RC3H1	100	96.883	ENSECAG00000021208	RC3H1	100	96.883	Equus_caballus
ENSPPRG00000009007	RC3H1	89	83.117	ENSEEUG00000014861	RC3H1	93	83.117	Erinaceus_europaeus
ENSPPRG00000009007	RC3H1	100	98.764	ENSFCAG00000014924	RC3H1	100	98.764	Felis_catus
ENSPPRG00000009007	RC3H1	100	86.626	ENSFALG00000002947	RC3H1	100	85.477	Ficedula_albicollis
ENSPPRG00000009007	RC3H1	100	94.793	ENSFDAG00000013303	RC3H1	100	94.793	Fukomys_damarensis
ENSPPRG00000009007	RC3H1	100	88.417	ENSGALG00000004587	RC3H1	100	87.876	Gallus_gallus
ENSPPRG00000009007	RC3H1	100	88.850	ENSGAGG00000018194	RC3H1	100	88.761	Gopherus_agassizii
ENSPPRG00000009007	RC3H1	100	89.534	ENSGGOG00000005735	RC3H1	100	89.534	Gorilla_gorilla
ENSPPRG00000009007	RC3H1	88	89.445	ENSHGLG00000004183	-	99	89.402	Heterocephalus_glaber_female
ENSPPRG00000009007	RC3H1	100	94.086	ENSHGLG00100008577	RC3H1	100	94.086	Heterocephalus_glaber_male
ENSPPRG00000009007	RC3H1	100	95.940	ENSSTOG00000016033	RC3H1	100	95.940	Ictidomys_tridecemlineatus
ENSPPRG00000009007	RC3H1	100	94.876	ENSJJAG00000018915	Rc3h1	100	94.611	Jaculus_jaculus
ENSPPRG00000009007	RC3H1	100	74.739	ENSLACG00000016186	RC3H1	100	77.754	Latimeria_chalumnae
ENSPPRG00000009007	RC3H1	97	96.718	ENSLAFG00000004367	RC3H1	100	96.718	Loxodonta_africana
ENSPPRG00000009007	RC3H1	100	96.734	ENSMFAG00000033725	RC3H1	100	96.734	Macaca_fascicularis
ENSPPRG00000009007	RC3H1	100	97.511	ENSMMUG00000000630	RC3H1	100	97.511	Macaca_mulatta
ENSPPRG00000009007	RC3H1	100	96.823	ENSMNEG00000035968	RC3H1	100	96.823	Macaca_nemestrina
ENSPPRG00000009007	RC3H1	100	96.734	ENSMLEG00000037455	RC3H1	100	96.734	Mandrillus_leucophaeus
ENSPPRG00000009007	RC3H1	100	86.732	ENSMAUG00000020864	Rc3h1	100	86.465	Mesocricetus_auratus
ENSPPRG00000009007	RC3H1	100	96.555	ENSMICG00000003000	RC3H1	100	96.555	Microcebus_murinus
ENSPPRG00000009007	RC3H1	93	92.891	ENSMOCG00000016587	Rc3h1	98	92.512	Microtus_ochrogaster
ENSPPRG00000009007	RC3H1	100	91.623	ENSMODG00000004289	RC3H1	100	91.711	Monodelphis_domestica
ENSPPRG00000009007	RC3H1	100	93.198	MGP_CAROLIEiJ_G0014756	Rc3h1	100	92.756	Mus_caroli
ENSPPRG00000009007	RC3H1	100	93.767	ENSMUSG00000040423	Rc3h1	100	93.321	Mus_musculus
ENSPPRG00000009007	RC3H1	100	92.845	MGP_PahariEiJ_G0027992	Rc3h1	100	92.403	Mus_pahari
ENSPPRG00000009007	RC3H1	100	93.589	MGP_SPRETEiJ_G0015563	Rc3h1	100	93.143	Mus_spretus
ENSPPRG00000009007	RC3H1	100	97.264	ENSMPUG00000004747	RC3H1	100	97.264	Mustela_putorius_furo
ENSPPRG00000009007	RC3H1	100	95.141	ENSMLUG00000011127	RC3H1	100	95.141	Myotis_lucifugus
ENSPPRG00000009007	RC3H1	100	95.495	ENSNGAG00000011135	Rc3h1	100	95.053	Nannospalax_galili
ENSPPRG00000009007	RC3H1	100	96.558	ENSNLEG00000015327	RC3H1	100	96.558	Nomascus_leucogenys
ENSPPRG00000009007	RC3H1	99	82.832	ENSOPRG00000013068	RC3H1	99	82.832	Ochotona_princeps
ENSPPRG00000009007	RC3H1	100	94.351	ENSODEG00000014185	RC3H1	100	94.351	Octodon_degus
ENSPPRG00000009007	RC3H1	100	90.480	ENSOANG00000000924	RC3H1	100	90.568	Ornithorhynchus_anatinus
ENSPPRG00000009007	RC3H1	99	95.789	ENSOCUG00000004930	RC3H1	98	95.789	Oryctolagus_cuniculus
ENSPPRG00000009007	RC3H1	100	89.330	ENSOGAG00000004044	RC3H1	100	89.330	Otolemur_garnettii
ENSPPRG00000009007	RC3H1	100	95.789	ENSOARG00000013011	RC3H1	100	95.789	Ovis_aries
ENSPPRG00000009007	RC3H1	100	96.649	ENSPPAG00000039253	RC3H1	100	96.649	Pan_paniscus
ENSPPRG00000009007	RC3H1	100	98.769	ENSPTIG00000015326	RC3H1	100	98.769	Panthera_tigris_altaica
ENSPPRG00000009007	RC3H1	100	96.649	ENSPTRG00000001702	RC3H1	100	96.649	Pan_troglodytes
ENSPPRG00000009007	RC3H1	100	96.734	ENSPANG00000008886	RC3H1	100	96.734	Papio_anubis
ENSPPRG00000009007	RC3H1	100	89.744	ENSPSIG00000016181	RC3H1	100	89.920	Pelodiscus_sinensis
ENSPPRG00000009007	RC3H1	100	93.816	ENSPEMG00000011966	Rc3h1	100	93.286	Peromyscus_maniculatus_bairdii
ENSPPRG00000009007	RC3H1	70	94.430	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSPPRG00000009007	RC3H1	100	93.292	ENSPPYG00000000490	RC3H1	98	97.297	Pongo_abelii
ENSPPRG00000009007	RC3H1	80	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSPPRG00000009007	RC3H1	82	95.936	ENSPCOG00000021795	RC3H1	96	95.936	Propithecus_coquereli
ENSPPRG00000009007	RC3H1	94	100.000	ENSPVAG00000007593	RC3H1	100	87.544	Pteropus_vampyrus
ENSPPRG00000009007	RC3H1	97	62.023	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSPPRG00000009007	RC3H1	100	96.737	ENSRBIG00000037743	RC3H1	100	96.737	Rhinopithecus_bieti
ENSPPRG00000009007	RC3H1	100	96.646	ENSRROG00000036546	RC3H1	100	96.646	Rhinopithecus_roxellana
ENSPPRG00000009007	RC3H1	93	92.741	ENSSBOG00000010664	RC3H1	100	92.741	Saimiri_boliviensis_boliviensis
ENSPPRG00000009007	RC3H1	100	90.573	ENSSHAG00000007589	RC3H1	100	90.661	Sarcophilus_harrisii
ENSPPRG00000009007	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSPPRG00000009007	RC3H1	100	83.874	ENSSPUG00000018472	RC3H1	100	83.246	Sphenodon_punctatus
ENSPPRG00000009007	RC3H1	100	97.685	ENSSSCG00000015498	RC3H1	100	97.685	Sus_scrofa
ENSPPRG00000009007	RC3H1	100	87.182	ENSTGUG00000004090	RC3H1	100	86.467	Taeniopygia_guttata
ENSPPRG00000009007	RC3H1	94	91.019	ENSTBEG00000005015	RC3H1	93	91.019	Tupaia_belangeri
ENSPPRG00000009007	RC3H1	100	96.740	ENSTTRG00000008572	RC3H1	100	96.740	Tursiops_truncatus
ENSPPRG00000009007	RC3H1	100	96.555	ENSUAMG00000019525	RC3H1	100	96.555	Ursus_americanus
ENSPPRG00000009007	RC3H1	100	97.087	ENSUMAG00000020087	RC3H1	100	97.087	Ursus_maritimus
ENSPPRG00000009007	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSPPRG00000009007	RC3H1	100	97.007	ENSVVUG00000014201	RC3H1	100	97.007	Vulpes_vulpes
ENSPPRG00000009007	RC3H1	100	77.981	ENSXETG00000020030	rc3h1	100	77.352	Xenopus_tropicalis