EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000009507 (Gene tree)
Gene ID: 109253488
Gene Symbol: RBM38
Alias: -
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 28674 bases
Position: chrKV860377.1:6730882-6759555
Accession: 109253488
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000017592	RRM_1	PF00076.22	1.3e-18	1	1
ENSPPRP00000017590	RRM_1	PF00076.22	4.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000015881	RBM38-201	366	-	ENSPPRP00000017592	121 (aa)	-	UPI000DE7E730
ENSPPRT00000015896	RBM38-202	1111	XM_019426457	ENSPPRP00000017590	239 (aa)	XP_019282002	UPI000905AFC5

Gene Model

Click here to download ENSPPRG00000009507's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000009507's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000009507	RBM38	58	37.143	ENSPPRG00000011438	-	60	37.143
ENSPPRG00000009507	RBM38	64	38.571	ENSPPRG00000020542	HNRNPAB	54	38.235
ENSPPRG00000009507	RBM38	51	40.323	ENSPPRG00000013361	-	69	40.323
ENSPPRG00000009507	RBM38	63	42.373	ENSPPRG00000000370	MSI1	68	36.842
ENSPPRG00000009507	RBM38	69	41.667	ENSPPRG00000008838	CIRBP	50	41.667
ENSPPRG00000009507	RBM38	74	42.857	ENSPPRG00000019212	HNRNPA2B1	57	42.857
ENSPPRG00000009507	RBM38	83	41.333	ENSPPRG00000022001	-	62	42.466
ENSPPRG00000009507	RBM38	70	42.373	ENSPPRG00000001848	MSI2	61	40.260
ENSPPRG00000009507	RBM38	81	90.816	ENSPPRG00000005000	RBM24	100	68.067
ENSPPRG00000009507	RBM38	64	44.118	ENSPPRG00000012587	HNRNPA1	55	44.118
ENSPPRG00000009507	RBM38	97	35.294	ENSPPRG00000012584	DAZAP1	50	34.862
ENSPPRG00000009507	RBM38	85	44.118	ENSPPRG00000005026	-	73	44.118
ENSPPRG00000009507	RBM38	55	31.343	ENSPPRG00000014350	SLIRP	69	30.882
ENSPPRG00000009507	RBM38	68	41.176	ENSPPRG00000015090	-	61	41.176
ENSPPRG00000009507	RBM38	67	38.667	ENSPPRG00000014655	HNRNPA0	51	38.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000009507	RBM38	100	97.521	ENSG00000132819	RBM38	100	97.521	Homo_sapiens
ENSPPRG00000009507	RBM38	80	85.714	ENSAPOG00000003301	rbm38	91	58.621	Acanthochromis_polyacanthus
ENSPPRG00000009507	RBM38	82	89.109	ENSAPOG00000009939	-	94	67.873	Acanthochromis_polyacanthus
ENSPPRG00000009507	RBM38	81	91.919	ENSACIG00000012502	-	100	88.034	Amphilophus_citrinellus
ENSPPRG00000009507	RBM38	81	84.848	ENSACIG00000000010	rbm38	74	63.298	Amphilophus_citrinellus
ENSPPRG00000009507	RBM38	81	84.848	ENSAOCG00000013497	-	91	58.621	Amphiprion_ocellaris
ENSPPRG00000009507	RBM38	100	78.862	ENSAOCG00000012559	RBM38	99	64.198	Amphiprion_ocellaris
ENSPPRG00000009507	RBM38	84	87.500	ENSAPEG00000023581	-	95	64.979	Amphiprion_percula
ENSPPRG00000009507	RBM38	98	76.230	ENSAPEG00000013137	rbm38	99	59.426	Amphiprion_percula
ENSPPRG00000009507	RBM38	84	86.538	ENSATEG00000016710	-	92	66.234	Anabas_testudineus
ENSPPRG00000009507	RBM38	81	83.838	ENSATEG00000016366	rbm38	94	60.714	Anabas_testudineus
ENSPPRG00000009507	RBM38	82	90.909	ENSACAG00000016238	RBM38	97	74.153	Anolis_carolinensis
ENSPPRG00000009507	RBM38	100	98.347	ENSANAG00000031959	RBM38	100	98.347	Aotus_nancymaae
ENSPPRG00000009507	RBM38	84	87.500	ENSACLG00000019514	-	92	67.100	Astatotilapia_calliptera
ENSPPRG00000009507	RBM38	76	86.957	ENSAMXG00000038120	rbm38	76	64.865	Astyanax_mexicanus
ENSPPRG00000009507	RBM38	82	90.099	ENSAMXG00000015601	-	95	68.696	Astyanax_mexicanus
ENSPPRG00000009507	RBM38	100	98.347	ENSBTAG00000008105	RBM38	100	96.234	Bos_taurus
ENSPPRG00000009507	RBM38	74	84.270	WBGene00006321	sup-12	59	84.270	Caenorhabditis_elegans
ENSPPRG00000009507	RBM38	100	98.347	ENSCJAG00000019139	RBM38	100	98.347	Callithrix_jacchus
ENSPPRG00000009507	RBM38	100	99.174	ENSCAFG00020021943	RBM38	100	97.490	Canis_lupus_dingo
ENSPPRG00000009507	RBM38	100	98.347	ENSCHIG00000002609	RBM38	100	95.816	Capra_hircus
ENSPPRG00000009507	RBM38	100	98.347	ENSCPOG00000012781	RBM38	100	95.397	Cavia_porcellus
ENSPPRG00000009507	RBM38	100	98.347	ENSCCAG00000036872	RBM38	100	98.347	Cebus_capucinus
ENSPPRG00000009507	RBM38	100	98.347	ENSCATG00000032133	RBM38	100	98.347	Cercocebus_atys
ENSPPRG00000009507	RBM38	96	95.217	ENSCLAG00000005906	RBM38	100	95.217	Chinchilla_lanigera
ENSPPRG00000009507	RBM38	100	98.347	ENSCSAG00000015503	RBM38	100	96.234	Chlorocebus_sabaeus
ENSPPRG00000009507	RBM38	81	93.878	ENSCPBG00000024059	RBM38	100	82.110	Chrysemys_picta_bellii
ENSPPRG00000009507	RBM38	80	84.536	ENSCSAVG00000001132	-	59	62.658	Ciona_savignyi
ENSPPRG00000009507	RBM38	99	79.167	ENSCANG00000030105	-	89	72.269	Colobus_angolensis_palliatus
ENSPPRG00000009507	RBM38	100	94.215	ENSCGRG00001012928	Rbm38	100	90.795	Cricetulus_griseus_chok1gshd
ENSPPRG00000009507	RBM38	78	92.553	ENSCSEG00000004701	-	93	67.890	Cynoglossus_semilaevis
ENSPPRG00000009507	RBM38	79	81.250	ENSCSEG00000020943	rbm38	60	60.326	Cynoglossus_semilaevis
ENSPPRG00000009507	RBM38	78	94.681	ENSCVAG00000005472	-	92	66.667	Cyprinodon_variegatus
ENSPPRG00000009507	RBM38	76	90.217	ENSCVAG00000015952	rbm38	91	57.082	Cyprinodon_variegatus
ENSPPRG00000009507	RBM38	78	91.489	ENSDARG00000058818	rbm38	92	64.574	Danio_rerio
ENSPPRG00000009507	RBM38	90	89.815	ENSDNOG00000032004	RBM38	100	89.352	Dasypus_novemcinctus
ENSPPRG00000009507	RBM38	88	83.178	ENSEBUG00000015164	rbm38	88	66.438	Eptatretus_burgeri
ENSPPRG00000009507	RBM38	100	98.347	ENSECAG00000007700	RBM38	100	94.979	Equus_caballus
ENSPPRG00000009507	RBM38	100	95.041	ENSEEUG00000013489	RBM38	100	94.167	Erinaceus_europaeus
ENSPPRG00000009507	RBM38	82	87.129	ENSELUG00000005849	-	95	66.102	Esox_lucius
ENSPPRG00000009507	RBM38	81	87.879	ENSELUG00000000585	-	80	68.478	Esox_lucius
ENSPPRG00000009507	RBM38	100	100.000	ENSFCAG00000042916	RBM38	100	100.000	Felis_catus
ENSPPRG00000009507	RBM38	85	92.233	ENSFALG00000010805	RBM38	99	79.688	Ficedula_albicollis
ENSPPRG00000009507	RBM38	78	94.681	ENSFHEG00000006160	-	92	71.163	Fundulus_heteroclitus
ENSPPRG00000009507	RBM38	77	90.323	ENSFHEG00000017748	rbm38	75	63.492	Fundulus_heteroclitus
ENSPPRG00000009507	RBM38	78	92.553	ENSGMOG00000016655	-	96	75.275	Gadus_morhua
ENSPPRG00000009507	RBM38	81	93.878	ENSGALG00000026081	RBM38	100	79.817	Gallus_gallus
ENSPPRG00000009507	RBM38	81	87.000	ENSGACG00000009873	-	100	66.816	Gasterosteus_aculeatus
ENSPPRG00000009507	RBM38	80	84.694	ENSGACG00000015224	rbm38	98	60.092	Gasterosteus_aculeatus
ENSPPRG00000009507	RBM38	81	93.878	ENSGAGG00000001187	RBM38	100	82.569	Gopherus_agassizii
ENSPPRG00000009507	RBM38	92	76.522	ENSHBUG00000012058	rbm38	98	58.159	Haplochromis_burtoni
ENSPPRG00000009507	RBM38	84	87.500	ENSHBUG00000011778	-	92	70.183	Haplochromis_burtoni
ENSPPRG00000009507	RBM38	100	96.694	ENSHGLG00000015077	RBM38	100	91.213	Heterocephalus_glaber_female
ENSPPRG00000009507	RBM38	82	88.119	ENSHCOG00000005622	-	54	73.438	Hippocampus_comes
ENSPPRG00000009507	RBM38	74	84.444	ENSHCOG00000019040	rbm38	65	66.225	Hippocampus_comes
ENSPPRG00000009507	RBM38	82	90.099	ENSIPUG00000019349	-	95	65.086	Ictalurus_punctatus
ENSPPRG00000009507	RBM38	60	95.833	ENSJJAG00000016299	-	90	95.833	Jaculus_jaculus
ENSPPRG00000009507	RBM38	74	85.393	ENSKMAG00000012402	rbm38	98	53.390	Kryptolebias_marmoratus
ENSPPRG00000009507	RBM38	81	84.848	ENSLBEG00000018878	rbm38	91	57.940	Labrus_bergylta
ENSPPRG00000009507	RBM38	84	86.538	ENSLBEG00000016163	RBM38	92	70.183	Labrus_bergylta
ENSPPRG00000009507	RBM38	82	90.000	ENSLOCG00000003456	rbm38	95	72.889	Lepisosteus_oculatus
ENSPPRG00000009507	RBM38	97	98.291	ENSMFAG00000043808	RBM38	97	98.291	Macaca_fascicularis
ENSPPRG00000009507	RBM38	100	98.347	ENSMMUG00000031391	RBM38	100	98.347	Macaca_mulatta
ENSPPRG00000009507	RBM38	100	98.347	ENSMNEG00000034683	RBM38	100	98.347	Macaca_nemestrina
ENSPPRG00000009507	RBM38	77	80.645	ENSMLEG00000043261	-	88	83.486	Mandrillus_leucophaeus
ENSPPRG00000009507	RBM38	82	89.109	ENSMAMG00000020499	RBM38	95	64.831	Mastacembelus_armatus
ENSPPRG00000009507	RBM38	81	83.838	ENSMAMG00000024135	rbm38	91	59.227	Mastacembelus_armatus
ENSPPRG00000009507	RBM38	81	83.838	ENSMZEG00005026036	rbm38	74	63.830	Maylandia_zebra
ENSPPRG00000009507	RBM38	84	87.500	ENSMZEG00005000849	-	92	70.183	Maylandia_zebra
ENSPPRG00000009507	RBM38	100	94.215	ENSMAUG00000021211	Rbm38	100	91.213	Mesocricetus_auratus
ENSPPRG00000009507	RBM38	90	96.759	ENSMICG00000038011	RBM38	100	96.759	Microcebus_murinus
ENSPPRG00000009507	RBM38	100	91.736	ENSMOCG00000008715	Rbm38	100	90.377	Microtus_ochrogaster
ENSPPRG00000009507	RBM38	96	79.661	ENSMMOG00000020051	-	99	64.730	Mola_mola
ENSPPRG00000009507	RBM38	100	87.603	ENSMODG00000016458	RBM38	100	79.668	Monodelphis_domestica
ENSPPRG00000009507	RBM38	82	89.109	ENSMALG00000004680	RBM38	70	74.074	Monopterus_albus
ENSPPRG00000009507	RBM38	81	80.612	ENSMALG00000022327	rbm38	67	69.677	Monopterus_albus
ENSPPRG00000009507	RBM38	100	92.562	MGP_CAROLIEiJ_G0024745	Rbm38	100	92.050	Mus_caroli
ENSPPRG00000009507	RBM38	100	92.562	ENSMUSG00000027510	Rbm38	100	92.469	Mus_musculus
ENSPPRG00000009507	RBM38	100	93.388	MGP_PahariEiJ_G0026186	Rbm38	100	91.632	Mus_pahari
ENSPPRG00000009507	RBM38	100	92.562	MGP_SPRETEiJ_G0025665	Rbm38	100	92.050	Mus_spretus
ENSPPRG00000009507	RBM38	81	100.000	ENSMPUG00000006518	RBM38	93	100.000	Mustela_putorius_furo
ENSPPRG00000009507	RBM38	90	92.130	ENSMLUG00000011140	RBM38	100	92.130	Myotis_lucifugus
ENSPPRG00000009507	RBM38	60	93.243	ENSNGAG00000014017	-	64	93.243	Nannospalax_galili
ENSPPRG00000009507	RBM38	84	87.500	ENSNBRG00000022545	-	92	67.100	Neolamprologus_brichardi
ENSPPRG00000009507	RBM38	92	78.261	ENSNBRG00000022685	rbm38	98	59.167	Neolamprologus_brichardi
ENSPPRG00000009507	RBM38	100	80.165	ENSMEUG00000005475	-	100	79.710	Notamacropus_eugenii
ENSPPRG00000009507	RBM38	100	98.347	ENSODEG00000007980	RBM38	100	95.397	Octodon_degus
ENSPPRG00000009507	RBM38	84	87.500	ENSONIG00000020324	-	92	66.957	Oreochromis_niloticus
ENSPPRG00000009507	RBM38	81	83.838	ENSONIG00000017073	rbm38	76	64.362	Oreochromis_niloticus
ENSPPRG00000009507	RBM38	88	89.623	ENSOANG00000009259	RBM38	90	75.847	Ornithorhynchus_anatinus
ENSPPRG00000009507	RBM38	78	86.316	ENSORLG00000012154	rbm38	74	61.702	Oryzias_latipes
ENSPPRG00000009507	RBM38	82	88.119	ENSORLG00000027180	-	92	66.094	Oryzias_latipes
ENSPPRG00000009507	RBM38	80	84.694	ENSORLG00020017871	rbm38	74	62.766	Oryzias_latipes_hni
ENSPPRG00000009507	RBM38	82	88.119	ENSORLG00020020751	-	95	63.710	Oryzias_latipes_hni
ENSPPRG00000009507	RBM38	94	77.193	ENSORLG00015012606	rbm38	97	56.596	Oryzias_latipes_hsok
ENSPPRG00000009507	RBM38	82	88.119	ENSORLG00015017040	-	92	66.379	Oryzias_latipes_hsok
ENSPPRG00000009507	RBM38	80	83.673	ENSOMEG00000006805	rbm38	74	62.766	Oryzias_melastigma
ENSPPRG00000009507	RBM38	82	88.119	ENSOMEG00000023912	-	92	65.368	Oryzias_melastigma
ENSPPRG00000009507	RBM38	100	97.541	ENSOGAG00000029136	RBM38	100	96.250	Otolemur_garnettii
ENSPPRG00000009507	RBM38	81	98.980	ENSPTRG00000045845	-	68	99.194	Pan_troglodytes
ENSPPRG00000009507	RBM38	100	97.521	ENSPTRG00000013661	RBM38	100	97.521	Pan_troglodytes
ENSPPRG00000009507	RBM38	100	98.347	ENSPANG00000020919	-	100	98.347	Papio_anubis
ENSPPRG00000009507	RBM38	99	73.333	ENSPANG00000033127	-	100	71.429	Papio_anubis
ENSPPRG00000009507	RBM38	84	84.906	ENSPKIG00000025417	rbm38	98	63.934	Paramormyrops_kingsleyae
ENSPPRG00000009507	RBM38	83	91.089	ENSPKIG00000018122	-	100	87.179	Paramormyrops_kingsleyae
ENSPPRG00000009507	RBM38	86	91.346	ENSPSIG00000011649	RBM38	95	80.357	Pelodiscus_sinensis
ENSPPRG00000009507	RBM38	78	86.170	ENSPMGG00000017094	-	72	72.283	Periophthalmus_magnuspinnatus
ENSPPRG00000009507	RBM38	80	84.694	ENSPMGG00000011343	rbm38	94	57.143	Periophthalmus_magnuspinnatus
ENSPPRG00000009507	RBM38	100	87.603	ENSPCIG00000013648	RBM38	100	79.253	Phascolarctos_cinereus
ENSPPRG00000009507	RBM38	78	89.362	ENSPFOG00000011658	rbm38	91	58.120	Poecilia_formosa
ENSPPRG00000009507	RBM38	78	94.681	ENSPLAG00000002500	-	92	67.234	Poecilia_latipinna
ENSPPRG00000009507	RBM38	78	89.362	ENSPLAG00000005218	rbm38	91	58.120	Poecilia_latipinna
ENSPPRG00000009507	RBM38	78	89.362	ENSPMEG00000015770	rbm38	91	58.120	Poecilia_mexicana
ENSPPRG00000009507	RBM38	78	89.362	ENSPREG00000007398	rbm38	91	58.547	Poecilia_reticulata
ENSPPRG00000009507	RBM38	100	97.541	ENSPCOG00000026201	RBM38	100	97.541	Propithecus_coquereli
ENSPPRG00000009507	RBM38	100	68.201	ENSPVAG00000006457	RBM38	100	68.201	Pteropus_vampyrus
ENSPPRG00000009507	RBM38	86	77.778	ENSPNYG00000021373	rbm38	98	55.466	Pundamilia_nyererei
ENSPPRG00000009507	RBM38	81	92.929	ENSPNYG00000019727	-	100	88.889	Pundamilia_nyererei
ENSPPRG00000009507	RBM38	79	90.625	ENSPNAG00000010596	rbm38	76	70.968	Pygocentrus_nattereri
ENSPPRG00000009507	RBM38	82	90.099	ENSPNAG00000015123	-	96	77.273	Pygocentrus_nattereri
ENSPPRG00000009507	RBM38	100	93.388	ENSRNOG00000006420	Rbm38	100	92.050	Rattus_norvegicus
ENSPPRG00000009507	RBM38	100	86.777	ENSRROG00000036388	-	100	76.569	Rhinopithecus_roxellana
ENSPPRG00000009507	RBM38	88	98.131	ENSSBOG00000031053	RBM38	100	98.131	Saimiri_boliviensis_boliviensis
ENSPPRG00000009507	RBM38	78	93.617	ENSSFOG00015004453	rbm38	92	70.455	Scleropages_formosus
ENSPPRG00000009507	RBM38	80	85.714	ENSSDUG00000022611	rbm38	74	65.957	Seriola_dumerili
ENSPPRG00000009507	RBM38	82	88.119	ENSSDUG00000021082	RBM38	92	66.234	Seriola_dumerili
ENSPPRG00000009507	RBM38	81	84.848	ENSSLDG00000010845	rbm38	90	62.326	Seriola_lalandi_dorsalis
ENSPPRG00000009507	RBM38	82	88.119	ENSSLDG00000011778	RBM38	92	66.234	Seriola_lalandi_dorsalis
ENSPPRG00000009507	RBM38	84	86.538	ENSSPAG00000020989	RBM38	91	68.692	Stegastes_partitus
ENSPPRG00000009507	RBM38	81	84.848	ENSSPAG00000011113	rbm38	74	64.894	Stegastes_partitus
ENSPPRG00000009507	RBM38	100	99.174	ENSSSCG00000007504	RBM38	100	97.908	Sus_scrofa
ENSPPRG00000009507	RBM38	78	92.553	ENSTRUG00000019869	-	92	67.672	Takifugu_rubripes
ENSPPRG00000009507	RBM38	81	84.848	ENSTRUG00000024954	rbm38	75	62.234	Takifugu_rubripes
ENSPPRG00000009507	RBM38	81	90.000	ENSTNIG00000007093	-	97	69.683	Tetraodon_nigroviridis
ENSPPRG00000009507	RBM38	98	89.076	ENSTBEG00000001689	-	50	89.076	Tupaia_belangeri
ENSPPRG00000009507	RBM38	100	99.174	ENSUAMG00000019780	RBM38	100	98.745	Ursus_americanus
ENSPPRG00000009507	RBM38	100	99.174	ENSVVUG00000017246	RBM38	100	97.490	Vulpes_vulpes
ENSPPRG00000009507	RBM38	81	90.816	ENSXETG00000011268	rbm38	99	74.324	Xenopus_tropicalis
ENSPPRG00000009507	RBM38	78	94.681	ENSXCOG00000017324	-	53	86.325	Xiphophorus_couchianus
ENSPPRG00000009507	RBM38	77	90.323	ENSXMAG00000023662	rbm38	91	58.369	Xiphophorus_maculatus