EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000010281 (Gene tree)
Gene ID: 109266574
Gene Symbol: LSG1
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 37240 bases
Position: chrKV860287.1:31717762-31755001
Accession: 109266574
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000018694	MMR_HSR1	PF01926.23	5.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000017041	LSG1-201	2001	XM_019448789	ENSPPRP00000018694	666 (aa)	XP_019304334	-

Gene Model

Click here to download ENSPPRG00000010281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000010281's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000010281	LSG1	99	84.211	ENSG00000041802	LSG1	98	89.655	Homo_sapiens
ENSPPRG00000010281	LSG1	100	63.528	ENSAPOG00000009694	lsg1	100	63.827	Acanthochromis_polyacanthus
ENSPPRG00000010281	LSG1	100	88.589	ENSAMEG00000009343	LSG1	100	88.589	Ailuropoda_melanoleuca
ENSPPRG00000010281	LSG1	98	63.553	ENSACIG00000012406	lsg1	100	62.278	Amphilophus_citrinellus
ENSPPRG00000010281	LSG1	100	62.649	ENSAOCG00000016066	lsg1	100	62.631	Amphiprion_ocellaris
ENSPPRG00000010281	LSG1	100	63.378	ENSAPEG00000003252	lsg1	100	62.930	Amphiprion_percula
ENSPPRG00000010281	LSG1	98	63.859	ENSATEG00000011794	lsg1	100	63.772	Anabas_testudineus
ENSPPRG00000010281	LSG1	95	64.050	ENSACAG00000004222	LSG1	99	63.579	Anolis_carolinensis
ENSPPRG00000010281	LSG1	99	85.714	ENSANAG00000021153	LSG1	99	85.714	Aotus_nancymaae
ENSPPRG00000010281	LSG1	100	62.925	ENSACLG00000000520	lsg1	100	62.777	Astatotilapia_calliptera
ENSPPRG00000010281	LSG1	100	62.259	ENSAMXG00000008271	lsg1	100	63.111	Astyanax_mexicanus
ENSPPRG00000010281	LSG1	99	84.511	ENSBTAG00000008461	LSG1	99	84.511	Bos_taurus
ENSPPRG00000010281	LSG1	68	48.837	WBGene00016907	C53H9.2	94	52.703	Caenorhabditis_elegans
ENSPPRG00000010281	LSG1	99	85.113	ENSCJAG00000013962	LSG1	99	85.113	Callithrix_jacchus
ENSPPRG00000010281	LSG1	95	88.468	ENSCAFG00000013445	LSG1	100	88.468	Canis_familiaris
ENSPPRG00000010281	LSG1	100	87.838	ENSCAFG00020002216	LSG1	99	88.854	Canis_lupus_dingo
ENSPPRG00000010281	LSG1	100	84.384	ENSCHIG00000015769	LSG1	100	84.384	Capra_hircus
ENSPPRG00000010281	LSG1	99	84.361	ENSTSYG00000001447	LSG1	99	84.361	Carlito_syrichta
ENSPPRG00000010281	LSG1	95	76.258	ENSCAPG00000009856	LSG1	99	75.943	Cavia_aperea
ENSPPRG00000010281	LSG1	99	84.361	ENSCCAG00000035744	LSG1	99	84.361	Cebus_capucinus
ENSPPRG00000010281	LSG1	99	84.962	ENSCATG00000042060	LSG1	99	83.759	Cercocebus_atys
ENSPPRG00000010281	LSG1	99	85.714	ENSCSAG00000008796	LSG1	92	85.714	Chlorocebus_sabaeus
ENSPPRG00000010281	LSG1	100	68.713	ENSCPBG00000015941	LSG1	83	68.713	Chrysemys_picta_bellii
ENSPPRG00000010281	LSG1	71	60.914	ENSCING00000007079	-	97	60.914	Ciona_intestinalis
ENSPPRG00000010281	LSG1	76	54.733	ENSCSAVG00000002514	-	96	54.733	Ciona_savignyi
ENSPPRG00000010281	LSG1	99	85.113	ENSCANG00000030709	LSG1	99	85.113	Colobus_angolensis_palliatus
ENSPPRG00000010281	LSG1	99	80.931	ENSCGRG00001019846	Lsg1	99	81.532	Cricetulus_griseus_chok1gshd
ENSPPRG00000010281	LSG1	99	80.931	ENSCGRG00000014617	Lsg1	99	81.532	Cricetulus_griseus_crigri
ENSPPRG00000010281	LSG1	98	63.927	ENSCSEG00000008522	lsg1	100	63.284	Cynoglossus_semilaevis
ENSPPRG00000010281	LSG1	98	64.462	ENSCVAG00000002484	lsg1	100	63.556	Cyprinodon_variegatus
ENSPPRG00000010281	LSG1	100	64.925	ENSDARG00000015352	lsg1	100	64.723	Danio_rerio
ENSPPRG00000010281	LSG1	99	82.635	ENSDNOG00000006224	LSG1	99	82.335	Dasypus_novemcinctus
ENSPPRG00000010281	LSG1	82	59.426	FBgn0266284	Ns3	91	57.588	Drosophila_melanogaster
ENSPPRG00000010281	LSG1	88	85.333	ENSETEG00000003888	LSG1	89	85.333	Echinops_telfairi
ENSPPRG00000010281	LSG1	89	55.390	ENSEBUG00000003119	lsg1	85	55.150	Eptatretus_burgeri
ENSPPRG00000010281	LSG1	99	87.068	ENSEASG00005000678	LSG1	99	87.068	Equus_asinus_asinus
ENSPPRG00000010281	LSG1	99	87.218	ENSECAG00000017659	LSG1	99	87.218	Equus_caballus
ENSPPRG00000010281	LSG1	86	82.906	ENSEEUG00000015217	LSG1	87	82.906	Erinaceus_europaeus
ENSPPRG00000010281	LSG1	100	59.701	ENSELUG00000023973	lsg1	100	60.000	Esox_lucius
ENSPPRG00000010281	LSG1	100	97.598	ENSFCAG00000024957	LSG1	100	97.598	Felis_catus
ENSPPRG00000010281	LSG1	99	63.636	ENSFALG00000007210	LSG1	99	63.636	Ficedula_albicollis
ENSPPRG00000010281	LSG1	99	76.866	ENSFDAG00000017373	LSG1	99	76.866	Fukomys_damarensis
ENSPPRG00000010281	LSG1	97	62.443	ENSFHEG00000003680	lsg1	99	62.798	Fundulus_heteroclitus
ENSPPRG00000010281	LSG1	82	72.269	ENSGMOG00000015834	lsg1	91	68.182	Gadus_morhua
ENSPPRG00000010281	LSG1	99	63.690	ENSGALG00000007058	LSG1	87	63.893	Gallus_gallus
ENSPPRG00000010281	LSG1	97	63.790	ENSGAFG00000015831	lsg1	99	63.158	Gambusia_affinis
ENSPPRG00000010281	LSG1	98	61.550	ENSGACG00000009323	lsg1	100	60.805	Gasterosteus_aculeatus
ENSPPRG00000010281	LSG1	99	85.263	ENSGGOG00000000520	LSG1	99	85.263	Gorilla_gorilla
ENSPPRG00000010281	LSG1	100	63.205	ENSHBUG00000005659	lsg1	100	63.056	Haplochromis_burtoni
ENSPPRG00000010281	LSG1	99	75.635	ENSHGLG00000017390	LSG1	99	76.532	Heterocephalus_glaber_female
ENSPPRG00000010281	LSG1	99	75.635	ENSHGLG00100018587	LSG1	99	76.532	Heterocephalus_glaber_male
ENSPPRG00000010281	LSG1	98	62.232	ENSHCOG00000016848	lsg1	100	62.219	Hippocampus_comes
ENSPPRG00000010281	LSG1	100	63.677	ENSIPUG00000008631	lsg1	100	62.930	Ictalurus_punctatus
ENSPPRG00000010281	LSG1	81	76.772	ENSSTOG00000010234	LSG1	99	78.740	Ictidomys_tridecemlineatus
ENSPPRG00000010281	LSG1	99	79.248	ENSJJAG00000015513	Lsg1	99	79.248	Jaculus_jaculus
ENSPPRG00000010281	LSG1	98	61.715	ENSKMAG00000009681	lsg1	100	61.562	Kryptolebias_marmoratus
ENSPPRG00000010281	LSG1	98	61.715	ENSLBEG00000024261	lsg1	100	61.261	Labrus_bergylta
ENSPPRG00000010281	LSG1	100	65.288	ENSLACG00000013399	LSG1	100	64.941	Latimeria_chalumnae
ENSPPRG00000010281	LSG1	98	65.549	ENSLOCG00000004918	lsg1	100	65.022	Lepisosteus_oculatus
ENSPPRG00000010281	LSG1	99	83.109	ENSLAFG00000012919	-	99	83.109	Loxodonta_africana
ENSPPRG00000010281	LSG1	99	85.564	ENSMFAG00000039903	LSG1	99	84.361	Macaca_fascicularis
ENSPPRG00000010281	LSG1	99	85.564	ENSMMUG00000010708	LSG1	99	85.564	Macaca_mulatta
ENSPPRG00000010281	LSG1	99	85.263	ENSMNEG00000031538	LSG1	99	83.910	Macaca_nemestrina
ENSPPRG00000010281	LSG1	99	85.564	ENSMLEG00000041184	LSG1	99	85.564	Mandrillus_leucophaeus
ENSPPRG00000010281	LSG1	100	62.463	ENSMAMG00000000470	lsg1	100	62.018	Mastacembelus_armatus
ENSPPRG00000010281	LSG1	100	63.353	ENSMZEG00005017865	lsg1	100	63.205	Maylandia_zebra
ENSPPRG00000010281	LSG1	89	65.050	ENSMGAG00000007050	LSG1	99	65.050	Meleagris_gallopavo
ENSPPRG00000010281	LSG1	91	79.672	ENSMAUG00000016976	Lsg1	93	79.672	Mesocricetus_auratus
ENSPPRG00000010281	LSG1	99	82.857	ENSMICG00000049087	LSG1	99	82.857	Microcebus_murinus
ENSPPRG00000010281	LSG1	99	79.341	ENSMOCG00000022136	Lsg1	99	79.671	Microtus_ochrogaster
ENSPPRG00000010281	LSG1	83	72.131	ENSMMOG00000008884	lsg1	95	71.661	Mola_mola
ENSPPRG00000010281	LSG1	99	57.585	ENSMODG00000019828	LSG1	99	56.932	Monodelphis_domestica
ENSPPRG00000010281	LSG1	100	79.580	MGP_CAROLIEiJ_G0020648	Lsg1	100	79.730	Mus_caroli
ENSPPRG00000010281	LSG1	100	80.030	ENSMUSG00000022538	Lsg1	100	80.330	Mus_musculus
ENSPPRG00000010281	LSG1	98	80.793	MGP_PahariEiJ_G0016352	Lsg1	100	80.660	Mus_pahari
ENSPPRG00000010281	LSG1	100	79.730	MGP_SPRETEiJ_G0021544	Lsg1	100	79.880	Mus_spretus
ENSPPRG00000010281	LSG1	100	88.589	ENSMPUG00000003734	LSG1	100	88.589	Mustela_putorius_furo
ENSPPRG00000010281	LSG1	100	85.886	ENSMLUG00000012548	LSG1	100	85.886	Myotis_lucifugus
ENSPPRG00000010281	LSG1	99	79.398	ENSNGAG00000021872	Lsg1	99	79.398	Nannospalax_galili
ENSPPRG00000010281	LSG1	99	85.564	ENSNLEG00000008293	LSG1	99	85.564	Nomascus_leucogenys
ENSPPRG00000010281	LSG1	69	68.041	ENSMEUG00000009041	-	82	68.041	Notamacropus_eugenii
ENSPPRG00000010281	LSG1	100	63.056	ENSONIG00000002635	lsg1	100	63.018	Oreochromis_niloticus
ENSPPRG00000010281	LSG1	95	70.912	ENSOANG00000012742	LSG1	99	70.755	Ornithorhynchus_anatinus
ENSPPRG00000010281	LSG1	99	84.060	ENSOCUG00000004817	LSG1	99	84.060	Oryctolagus_cuniculus
ENSPPRG00000010281	LSG1	98	62.137	ENSORLG00000007695	lsg1	100	62.425	Oryzias_latipes
ENSPPRG00000010281	LSG1	98	61.409	ENSORLG00020016286	lsg1	100	60.831	Oryzias_latipes_hni
ENSPPRG00000010281	LSG1	98	62.175	ENSORLG00015012025	lsg1	100	61.712	Oryzias_latipes_hsok
ENSPPRG00000010281	LSG1	98	61.562	ENSOMEG00000022379	lsg1	100	61.940	Oryzias_melastigma
ENSPPRG00000010281	LSG1	99	84.708	ENSOGAG00000003475	LSG1	99	84.708	Otolemur_garnettii
ENSPPRG00000010281	LSG1	100	84.384	ENSOARG00000020403	LSG1	100	84.384	Ovis_aries
ENSPPRG00000010281	LSG1	99	84.962	ENSPPAG00000029271	LSG1	99	84.962	Pan_paniscus
ENSPPRG00000010281	LSG1	100	98.649	ENSPTIG00000010789	LSG1	100	98.649	Panthera_tigris_altaica
ENSPPRG00000010281	LSG1	99	84.812	ENSPTRG00000015760	LSG1	99	84.812	Pan_troglodytes
ENSPPRG00000010281	LSG1	99	85.113	ENSPANG00000018249	LSG1	99	83.910	Papio_anubis
ENSPPRG00000010281	LSG1	97	63.650	ENSPKIG00000002895	lsg1	99	62.908	Paramormyrops_kingsleyae
ENSPPRG00000010281	LSG1	96	64.660	ENSPSIG00000009821	LSG1	100	64.043	Pelodiscus_sinensis
ENSPPRG00000010281	LSG1	95	63.365	ENSPMGG00000000931	lsg1	100	63.208	Periophthalmus_magnuspinnatus
ENSPPRG00000010281	LSG1	99	80.090	ENSPEMG00000012082	-	99	79.790	Peromyscus_maniculatus_bairdii
ENSPPRG00000010281	LSG1	99	58.150	ENSPMAG00000007451	lsg1	99	58.150	Petromyzon_marinus
ENSPPRG00000010281	LSG1	100	67.016	ENSPCIG00000013890	LSG1	82	67.016	Phascolarctos_cinereus
ENSPPRG00000010281	LSG1	97	64.615	ENSPFOG00000021882	lsg1	99	64.414	Poecilia_formosa
ENSPPRG00000010281	LSG1	97	63.359	ENSPLAG00000019536	lsg1	99	63.418	Poecilia_latipinna
ENSPPRG00000010281	LSG1	97	63.804	ENSPMEG00000017281	lsg1	99	63.623	Poecilia_mexicana
ENSPPRG00000010281	LSG1	97	54.079	ENSPREG00000006048	lsg1	99	53.687	Poecilia_reticulata
ENSPPRG00000010281	LSG1	92	84.228	ENSPPYG00000014425	LSG1	100	84.228	Pongo_abelii
ENSPPRG00000010281	LSG1	90	85.333	ENSPCAG00000005511	LSG1	90	85.333	Procavia_capensis
ENSPPRG00000010281	LSG1	99	84.060	ENSPCOG00000012360	LSG1	99	84.060	Propithecus_coquereli
ENSPPRG00000010281	LSG1	100	62.777	ENSPNYG00000021994	lsg1	100	62.629	Pundamilia_nyererei
ENSPPRG00000010281	LSG1	100	64.328	ENSPNAG00000015533	lsg1	100	64.072	Pygocentrus_nattereri
ENSPPRG00000010281	LSG1	100	80.149	ENSRNOG00000001727	Lsg1	100	80.299	Rattus_norvegicus
ENSPPRG00000010281	LSG1	99	84.361	ENSRBIG00000029053	LSG1	99	84.361	Rhinopithecus_bieti
ENSPPRG00000010281	LSG1	99	84.361	ENSRROG00000037702	LSG1	99	84.361	Rhinopithecus_roxellana
ENSPPRG00000010281	LSG1	66	56.322	YGL099W	LSG1	68	56.322	Saccharomyces_cerevisiae
ENSPPRG00000010281	LSG1	99	85.865	ENSSBOG00000034938	LSG1	99	85.865	Saimiri_boliviensis_boliviensis
ENSPPRG00000010281	LSG1	78	64.860	ENSSHAG00000003487	LSG1	100	63.415	Sarcophilus_harrisii
ENSPPRG00000010281	LSG1	98	63.014	ENSSFOG00015008955	lsg1	100	62.725	Scleropages_formosus
ENSPPRG00000010281	LSG1	98	63.595	ENSSDUG00000004622	lsg1	100	63.134	Seriola_dumerili
ENSPPRG00000010281	LSG1	98	64.067	ENSSLDG00000010869	lsg1	100	63.150	Seriola_lalandi_dorsalis
ENSPPRG00000010281	LSG1	82	81.948	ENSSARG00000012981	LSG1	81	81.948	Sorex_araneus
ENSPPRG00000010281	LSG1	100	67.308	ENSSPUG00000016347	LSG1	100	67.160	Sphenodon_punctatus
ENSPPRG00000010281	LSG1	100	84.384	ENSSSCG00000011827	LSG1	100	84.384	Sus_scrofa
ENSPPRG00000010281	LSG1	89	65.159	ENSTGUG00000009068	LSG1	100	65.159	Taeniopygia_guttata
ENSPPRG00000010281	LSG1	98	60.031	ENSTRUG00000017380	lsg1	100	59.159	Takifugu_rubripes
ENSPPRG00000010281	LSG1	98	63.761	ENSTNIG00000015570	lsg1	100	63.582	Tetraodon_nigroviridis
ENSPPRG00000010281	LSG1	100	77.061	ENSTTRG00000000559	LSG1	100	77.061	Tursiops_truncatus
ENSPPRG00000010281	LSG1	100	89.339	ENSUAMG00000012454	LSG1	100	89.339	Ursus_americanus
ENSPPRG00000010281	LSG1	100	89.339	ENSUMAG00000000855	LSG1	100	89.339	Ursus_maritimus
ENSPPRG00000010281	LSG1	95	80.253	ENSVPAG00000012400	LSG1	100	80.253	Vicugna_pacos
ENSPPRG00000010281	LSG1	95	87.362	ENSVVUG00000008956	LSG1	97	87.362	Vulpes_vulpes
ENSPPRG00000010281	LSG1	100	65.140	ENSXETG00000003451	lsg1	100	65.492	Xenopus_tropicalis
ENSPPRG00000010281	LSG1	97	63.303	ENSXCOG00000003239	lsg1	99	62.687	Xiphophorus_couchianus
ENSPPRG00000010281	LSG1	97	63.024	ENSXMAG00000005536	lsg1	99	62.427	Xiphophorus_maculatus