EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000010839 (Gene tree)
Gene ID: 109250466
Gene Symbol: ZIC3
Alias: -
Full Name: Zic family member 3
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 12695 bases
Position: chrKV860358.1:1481916-1494610
Accession: 109250466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000019492	zf-C2H2	PF00096.26	1.9e-21	1	4
ENSPPRP00000019492	zf-C2H2	PF00096.26	1.9e-21	2	4
ENSPPRP00000019492	zf-C2H2	PF00096.26	1.9e-21	3	4
ENSPPRP00000019492	zf-C2H2	PF00096.26	1.9e-21	4	4
ENSPPRP00000019473	zf-C2H2	PF00096.26	1.2e-20	1	4
ENSPPRP00000019473	zf-C2H2	PF00096.26	1.2e-20	2	4
ENSPPRP00000019473	zf-C2H2	PF00096.26	1.2e-20	3	4
ENSPPRP00000019473	zf-C2H2	PF00096.26	1.2e-20	4	4
ENSPPRP00000019473	zf-met	PF12874.7	0.00044	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000017871	ZIC3-202	4081	XM_019421516	ENSPPRP00000019492	467 (aa)	XP_019277061	UPI0009057DFE
ENSPPRT00000017870	ZIC3-201	1374	XM_019421517	ENSPPRP00000019473	457 (aa)	XP_019277062	UPI000904EAE4

Gene Model

Click here to download ENSPPRG00000010839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000010839's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000010839	ZIC3	50	39.815	ENSPPRG00000011201	-	80	39.252

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000010839	ZIC3	100	98.073	ENSG00000156925	ZIC3	100	98.073	Homo_sapiens
ENSPPRG00000010839	ZIC3	100	98.501	ENSANAG00000019614	ZIC3	100	98.501	Aotus_nancymaae
ENSPPRG00000010839	ZIC3	100	98.073	ENSCJAG00000013792	ZIC3	100	98.073	Callithrix_jacchus
ENSPPRG00000010839	ZIC3	100	99.572	ENSCAFG00000018979	ZIC3	100	99.572	Canis_familiaris
ENSPPRG00000010839	ZIC3	100	95.503	ENSTSYG00000003356	ZIC3	100	95.503	Carlito_syrichta
ENSPPRG00000010839	ZIC3	53	98.374	ENSCPOG00000002374	ZIC3	100	98.374	Cavia_porcellus
ENSPPRG00000010839	ZIC3	100	98.287	ENSCCAG00000025983	ZIC3	100	98.287	Cebus_capucinus
ENSPPRG00000010839	ZIC3	100	98.073	ENSCATG00000036569	ZIC3	100	98.073	Cercocebus_atys
ENSPPRG00000010839	ZIC3	100	98.501	ENSCLAG00000001934	ZIC3	100	98.501	Chinchilla_lanigera
ENSPPRG00000010839	ZIC3	93	87.156	ENSCPBG00000026115	ZIC3	100	87.156	Chrysemys_picta_bellii
ENSPPRG00000010839	ZIC3	100	98.287	ENSCANG00000017505	ZIC3	100	98.287	Colobus_angolensis_palliatus
ENSPPRG00000010839	ZIC3	100	98.073	ENSCGRG00001024527	Zic3	100	98.073	Cricetulus_griseus_chok1gshd
ENSPPRG00000010839	ZIC3	100	98.073	ENSDORG00000025481	Zic3	100	98.073	Dipodomys_ordii
ENSPPRG00000010839	ZIC3	100	99.572	ENSFCAG00000025684	ZIC3	100	99.572	Felis_catus
ENSPPRG00000010839	ZIC3	79	98.652	ENSFDAG00000014929	ZIC3	100	99.187	Fukomys_damarensis
ENSPPRG00000010839	ZIC3	94	81.136	ENSGAGG00000004149	ZIC3	92	81.136	Gopherus_agassizii
ENSPPRG00000010839	ZIC3	100	98.073	ENSGGOG00000011914	ZIC3	100	98.073	Gorilla_gorilla
ENSPPRG00000010839	ZIC3	100	97.645	ENSHGLG00000006298	ZIC3	100	97.645	Heterocephalus_glaber_female
ENSPPRG00000010839	ZIC3	67	69.408	ENSHGLG00100002829	ZIC3	100	77.389	Heterocephalus_glaber_male
ENSPPRG00000010839	ZIC3	100	98.073	ENSJJAG00000022714	Zic3	100	98.073	Jaculus_jaculus
ENSPPRG00000010839	ZIC3	100	77.350	ENSLACG00000014597	ZIC3	100	77.350	Latimeria_chalumnae
ENSPPRG00000010839	ZIC3	88	94.891	ENSLAFG00000007048	ZIC3	99	94.891	Loxodonta_africana
ENSPPRG00000010839	ZIC3	100	98.073	ENSMFAG00000027018	ZIC3	100	98.073	Macaca_fascicularis
ENSPPRG00000010839	ZIC3	100	97.593	ENSMMUG00000002023	ZIC3	100	97.593	Macaca_mulatta
ENSPPRG00000010839	ZIC3	100	98.073	ENSMNEG00000040682	ZIC3	100	98.073	Macaca_nemestrina
ENSPPRG00000010839	ZIC3	100	98.073	ENSMLEG00000004378	ZIC3	100	98.073	Mandrillus_leucophaeus
ENSPPRG00000010839	ZIC3	100	97.859	ENSMAUG00000009402	Zic3	100	97.859	Mesocricetus_auratus
ENSPPRG00000010839	ZIC3	100	98.501	ENSMICG00000042529	ZIC3	100	98.501	Microcebus_murinus
ENSPPRG00000010839	ZIC3	100	97.645	ENSMOCG00000020544	Zic3	100	97.645	Microtus_ochrogaster
ENSPPRG00000010839	ZIC3	100	97.645	MGP_CAROLIEiJ_G0033101	Zic3	100	99.187	Mus_caroli
ENSPPRG00000010839	ZIC3	100	97.645	ENSMUSG00000067860	Zic3	100	99.187	Mus_musculus
ENSPPRG00000010839	ZIC3	100	97.645	MGP_PahariEiJ_G0031644	Zic3	100	99.187	Mus_pahari
ENSPPRG00000010839	ZIC3	100	97.645	MGP_SPRETEiJ_G0034256	Zic3	100	99.187	Mus_spretus
ENSPPRG00000010839	ZIC3	100	97.430	ENSNGAG00000023346	Zic3	100	97.430	Nannospalax_galili
ENSPPRG00000010839	ZIC3	78	98.221	ENSNLEG00000003005	-	100	98.221	Nomascus_leucogenys
ENSPPRG00000010839	ZIC3	100	98.287	ENSODEG00000005556	ZIC3	100	98.287	Octodon_degus
ENSPPRG00000010839	ZIC3	100	98.073	ENSPPAG00000030013	ZIC3	100	98.073	Pan_paniscus
ENSPPRG00000010839	ZIC3	100	98.073	ENSPTRG00000043849	ZIC3	100	98.073	Pan_troglodytes
ENSPPRG00000010839	ZIC3	100	98.073	ENSPANG00000011357	ZIC3	100	98.073	Papio_anubis
ENSPPRG00000010839	ZIC3	100	73.561	ENSPKIG00000017705	zic3	100	73.561	Paramormyrops_kingsleyae
ENSPPRG00000010839	ZIC3	62	89.726	ENSPSIG00000011896	ZIC3	99	89.726	Pelodiscus_sinensis
ENSPPRG00000010839	ZIC3	100	97.859	ENSPEMG00000022168	Zic3	100	97.859	Peromyscus_maniculatus_bairdii
ENSPPRG00000010839	ZIC3	100	97.859	ENSPCOG00000021557	ZIC3	100	97.859	Propithecus_coquereli
ENSPPRG00000010839	ZIC3	100	97.216	ENSRNOG00000000861	Zic3	100	97.216	Rattus_norvegicus
ENSPPRG00000010839	ZIC3	100	98.287	ENSRBIG00000030660	ZIC3	100	98.287	Rhinopithecus_bieti
ENSPPRG00000010839	ZIC3	100	98.287	ENSRROG00000028410	ZIC3	100	98.287	Rhinopithecus_roxellana
ENSPPRG00000010839	ZIC3	100	98.287	ENSSBOG00000024684	ZIC3	100	98.287	Saimiri_boliviensis_boliviensis
ENSPPRG00000010839	ZIC3	99	74.946	ENSSFOG00015011731	zic3	100	74.946	Scleropages_formosus
ENSPPRG00000010839	ZIC3	99	68.951	ENSSFOG00015008079	zic3	100	68.951	Scleropages_formosus
ENSPPRG00000010839	ZIC3	84	83.544	ENSTGUG00000002155	ZIC3	100	83.544	Taeniopygia_guttata
ENSPPRG00000010839	ZIC3	100	99.572	ENSVVUG00000021378	ZIC3	100	99.572	Vulpes_vulpes
ENSPPRG00000010839	ZIC3	100	76.809	ENSXETG00000024458	zic3	100	76.809	Xenopus_tropicalis