EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000011222 (Gene tree)
Gene ID: 109253890
Gene Symbol: SMG7
Alias: -
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 92638 bases
Position: chrKV860276.1:24488557-24581194
Accession: 109253890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000019725	EST1	PF10374.9	7.4e-25	1	1
ENSPPRP00000019748	EST1	PF10374.9	7.7e-25	1	1
ENSPPRP00000019741	EST1	PF10374.9	7.8e-25	1	1
ENSPPRP00000019725	EST1_DNA_bind	PF10373.9	1.8e-55	1	1
ENSPPRP00000019748	EST1_DNA_bind	PF10373.9	1.9e-55	1	1
ENSPPRP00000019741	EST1_DNA_bind	PF10373.9	1.9e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000018148	SMG7-204	5996	XM_019427301	ENSPPRP00000019748	1168 (aa)	XP_019282846	-
ENSPPRT00000018112	SMG7-201	219	-	ENSPPRP00000019714	73 (aa)	-	UPI0001D3BD71
ENSPPRT00000018133	SMG7-203	3534	-	ENSPPRP00000019741	1177 (aa)	-	-
ENSPPRT00000018115	SMG7-202	3411	-	ENSPPRP00000019725	1136 (aa)	-	-

Gene Model

Click here to download ENSPPRG00000011222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000011222's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000011222	SMG7	100	97.801	ENSG00000116698	SMG7	99	99.329	Homo_sapiens
ENSPPRG00000011222	SMG7	89	74.251	ENSAPOG00000009611	smg7	95	74.887	Acanthochromis_polyacanthus
ENSPPRG00000011222	SMG7	99	98.138	ENSAMEG00000002357	SMG7	99	98.138	Ailuropoda_melanoleuca
ENSPPRG00000011222	SMG7	97	64.973	ENSACIG00000015152	smg7	100	65.597	Amphilophus_citrinellus
ENSPPRG00000011222	SMG7	99	65.868	ENSAOCG00000013538	smg7	99	66.610	Amphiprion_ocellaris
ENSPPRG00000011222	SMG7	99	65.726	ENSAPEG00000007851	smg7	99	66.468	Amphiprion_percula
ENSPPRG00000011222	SMG7	99	65.447	ENSATEG00000006931	smg7	99	65.673	Anabas_testudineus
ENSPPRG00000011222	SMG7	100	88.976	ENSAPLG00000015811	SMG7	100	89.064	Anas_platyrhynchos
ENSPPRG00000011222	SMG7	100	83.793	ENSACAG00000014989	SMG7	100	84.211	Anolis_carolinensis
ENSPPRG00000011222	SMG7	100	97.537	ENSANAG00000028114	SMG7	100	97.537	Aotus_nancymaae
ENSPPRG00000011222	SMG7	99	66.438	ENSACLG00000022079	smg7	99	66.036	Astatotilapia_calliptera
ENSPPRG00000011222	SMG7	99	68.000	ENSAMXG00000020809	smg7	99	68.288	Astyanax_mexicanus
ENSPPRG00000011222	SMG7	100	97.519	ENSBTAG00000008003	SMG7	100	97.098	Bos_taurus
ENSPPRG00000011222	SMG7	100	97.449	ENSCJAG00000005135	SMG7	100	97.449	Callithrix_jacchus
ENSPPRG00000011222	SMG7	100	98.630	ENSCAFG00000013276	SMG7	99	98.630	Canis_familiaris
ENSPPRG00000011222	SMG7	100	98.630	ENSCAFG00020015475	SMG7	99	98.630	Canis_lupus_dingo
ENSPPRG00000011222	SMG7	97	97.264	ENSCHIG00000018192	SMG7	99	97.264	Capra_hircus
ENSPPRG00000011222	SMG7	100	97.010	ENSTSYG00000002667	SMG7	100	97.010	Carlito_syrichta
ENSPPRG00000011222	SMG7	99	97.425	ENSCPOG00000008906	SMG7	100	97.425	Cavia_porcellus
ENSPPRG00000011222	SMG7	100	97.713	ENSCCAG00000028596	SMG7	100	97.713	Cebus_capucinus
ENSPPRG00000011222	SMG7	100	97.977	ENSCATG00000011063	SMG7	100	97.977	Cercocebus_atys
ENSPPRG00000011222	SMG7	100	96.920	ENSCLAG00000010751	SMG7	100	96.867	Chinchilla_lanigera
ENSPPRG00000011222	SMG7	100	97.690	ENSCSAG00000012654	SMG7	99	97.690	Chlorocebus_sabaeus
ENSPPRG00000011222	SMG7	94	86.124	ENSCHOG00000010522	SMG7	99	86.571	Choloepus_hoffmanni
ENSPPRG00000011222	SMG7	100	91.236	ENSCPBG00000015724	SMG7	100	91.323	Chrysemys_picta_bellii
ENSPPRG00000011222	SMG7	99	97.872	ENSCANG00000015680	SMG7	99	97.872	Colobus_angolensis_palliatus
ENSPPRG00000011222	SMG7	100	95.075	ENSCGRG00001013705	Smg7	100	95.798	Cricetulus_griseus_chok1gshd
ENSPPRG00000011222	SMG7	99	95.031	ENSCGRG00000018401	Smg7	100	95.735	Cricetulus_griseus_crigri
ENSPPRG00000011222	SMG7	98	63.715	ENSCVAG00000011842	smg7	100	63.832	Cyprinodon_variegatus
ENSPPRG00000011222	SMG7	99	67.589	ENSDARG00000060767	smg7	99	66.382	Danio_rerio
ENSPPRG00000011222	SMG7	98	96.432	ENSDORG00000007331	Smg7	100	96.432	Dipodomys_ordii
ENSPPRG00000011222	SMG7	94	95.073	ENSETEG00000002654	SMG7	99	95.164	Echinops_telfairi
ENSPPRG00000011222	SMG7	100	98.460	ENSEASG00005006524	SMG7	99	98.460	Equus_asinus_asinus
ENSPPRG00000011222	SMG7	100	98.546	ENSECAG00000004313	SMG7	99	98.546	Equus_caballus
ENSPPRG00000011222	SMG7	98	93.231	ENSEEUG00000002024	SMG7	99	93.316	Erinaceus_europaeus
ENSPPRG00000011222	SMG7	99	64.227	ENSELUG00000010293	smg7	99	66.549	Esox_lucius
ENSPPRG00000011222	SMG7	100	99.829	ENSFCAG00000010900	SMG7	100	99.829	Felis_catus
ENSPPRG00000011222	SMG7	98	82.398	ENSFALG00000003047	SMG7	100	83.588	Ficedula_albicollis
ENSPPRG00000011222	SMG7	97	96.905	ENSFDAG00000012121	SMG7	99	96.791	Fukomys_damarensis
ENSPPRG00000011222	SMG7	99	63.979	ENSFHEG00000011073	smg7	99	64.524	Fundulus_heteroclitus
ENSPPRG00000011222	SMG7	89	75.379	ENSGMOG00000004916	smg7	88	75.379	Gadus_morhua
ENSPPRG00000011222	SMG7	100	89.510	ENSGALG00000004667	SMG7	100	89.598	Gallus_gallus
ENSPPRG00000011222	SMG7	99	64.328	ENSGAFG00000019000	smg7	99	64.666	Gambusia_affinis
ENSPPRG00000011222	SMG7	95	65.088	ENSGACG00000001634	smg7	99	64.829	Gasterosteus_aculeatus
ENSPPRG00000011222	SMG7	100	97.801	ENSGGOG00000002342	SMG7	100	97.801	Gorilla_gorilla
ENSPPRG00000011222	SMG7	99	65.179	ENSHBUG00000003726	smg7	97	73.096	Haplochromis_burtoni
ENSPPRG00000011222	SMG7	100	96.922	ENSHGLG00000009353	SMG7	100	97.059	Heterocephalus_glaber_female
ENSPPRG00000011222	SMG7	97	88.879	ENSHGLG00100004878	-	99	88.703	Heterocephalus_glaber_male
ENSPPRG00000011222	SMG7	100	97.010	ENSHGLG00100009637	-	100	97.010	Heterocephalus_glaber_male
ENSPPRG00000011222	SMG7	99	68.352	ENSIPUG00000016997	smg7	99	68.412	Ictalurus_punctatus
ENSPPRG00000011222	SMG7	98	97.737	ENSSTOG00000000401	SMG7	100	97.737	Ictidomys_tridecemlineatus
ENSPPRG00000011222	SMG7	97	94.881	ENSJJAG00000012351	Smg7	99	94.969	Jaculus_jaculus
ENSPPRG00000011222	SMG7	97	61.491	ENSKMAG00000004900	smg7	100	62.160	Kryptolebias_marmoratus
ENSPPRG00000011222	SMG7	99	66.005	ENSLBEG00000002983	smg7	99	66.091	Labrus_bergylta
ENSPPRG00000011222	SMG7	52	63.000	ENSLBEG00000005220	-	75	64.623	Labrus_bergylta
ENSPPRG00000011222	SMG7	99	75.868	ENSLACG00000000972	SMG7	99	76.716	Latimeria_chalumnae
ENSPPRG00000011222	SMG7	99	66.418	ENSLOCG00000002010	smg7	99	67.531	Lepisosteus_oculatus
ENSPPRG00000011222	SMG7	98	97.041	ENSLAFG00000008186	SMG7	100	97.041	Loxodonta_africana
ENSPPRG00000011222	SMG7	100	97.776	ENSMFAG00000031653	SMG7	99	97.776	Macaca_fascicularis
ENSPPRG00000011222	SMG7	100	97.861	ENSMMUG00000018458	SMG7	99	97.861	Macaca_mulatta
ENSPPRG00000011222	SMG7	100	97.977	ENSMNEG00000034798	SMG7	100	97.977	Macaca_nemestrina
ENSPPRG00000011222	SMG7	100	97.977	ENSMLEG00000037170	SMG7	100	97.977	Mandrillus_leucophaeus
ENSPPRG00000011222	SMG7	88	64.763	ENSMAMG00000018733	smg7	85	64.951	Mastacembelus_armatus
ENSPPRG00000011222	SMG7	99	66.296	ENSMZEG00005015247	smg7	99	66.036	Maylandia_zebra
ENSPPRG00000011222	SMG7	99	89.488	ENSMGAG00000001561	SMG7	99	89.576	Meleagris_gallopavo
ENSPPRG00000011222	SMG7	100	95.339	ENSMAUG00000019484	Smg7	100	96.345	Mesocricetus_auratus
ENSPPRG00000011222	SMG7	100	98.151	ENSMICG00000007145	SMG7	100	98.151	Microcebus_murinus
ENSPPRG00000011222	SMG7	100	94.635	ENSMOCG00000020748	Smg7	100	96.171	Microtus_ochrogaster
ENSPPRG00000011222	SMG7	99	64.267	ENSMMOG00000001524	smg7	99	64.553	Mola_mola
ENSPPRG00000011222	SMG7	92	92.789	ENSMODG00000007139	SMG7	99	92.884	Monodelphis_domestica
ENSPPRG00000011222	SMG7	99	65.434	ENSMALG00000000061	smg7	94	69.652	Monopterus_albus
ENSPPRG00000011222	SMG7	100	94.987	MGP_CAROLIEiJ_G0014704	Smg7	100	95.387	Mus_caroli
ENSPPRG00000011222	SMG7	100	94.899	ENSMUSG00000042772	Smg7	100	95.648	Mus_musculus
ENSPPRG00000011222	SMG7	100	94.371	MGP_PahariEiJ_G0027940	Smg7	100	95.735	Mus_pahari
ENSPPRG00000011222	SMG7	100	94.987	MGP_SPRETEiJ_G0015511	Smg7	100	95.735	Mus_spretus
ENSPPRG00000011222	SMG7	96	98.662	ENSMPUG00000011732	SMG7	97	98.662	Mustela_putorius_furo
ENSPPRG00000011222	SMG7	97	97.176	ENSMLUG00000015417	SMG7	99	97.176	Myotis_lucifugus
ENSPPRG00000011222	SMG7	100	96.039	ENSNGAG00000009836	Smg7	100	96.167	Nannospalax_galili
ENSPPRG00000011222	SMG7	98	61.996	ENSNBRG00000024343	smg7	98	70.952	Neolamprologus_brichardi
ENSPPRG00000011222	SMG7	100	98.065	ENSNLEG00000018018	SMG7	100	98.065	Nomascus_leucogenys
ENSPPRG00000011222	SMG7	70	92.276	ENSMEUG00000004681	SMG7	73	92.276	Notamacropus_eugenii
ENSPPRG00000011222	SMG7	98	81.670	ENSOPRG00000013942	SMG7	96	85.192	Ochotona_princeps
ENSPPRG00000011222	SMG7	100	96.658	ENSODEG00000010390	SMG7	100	96.780	Octodon_degus
ENSPPRG00000011222	SMG7	99	66.039	ENSONIG00000000277	smg7	99	65.638	Oreochromis_niloticus
ENSPPRG00000011222	SMG7	96	91.401	ENSOANG00000000994	SMG7	100	91.667	Ornithorhynchus_anatinus
ENSPPRG00000011222	SMG7	100	89.735	ENSOCUG00000005887	SMG7	95	89.906	Oryctolagus_cuniculus
ENSPPRG00000011222	SMG7	99	64.162	ENSORLG00000007314	smg7	99	64.508	Oryzias_latipes
ENSPPRG00000011222	SMG7	99	64.508	ENSORLG00020015779	smg7	99	64.853	Oryzias_latipes_hni
ENSPPRG00000011222	SMG7	99	64.028	ENSORLG00015012289	smg7	99	64.625	Oryzias_latipes_hsok
ENSPPRG00000011222	SMG7	99	62.468	ENSOMEG00000002328	smg7	99	63.267	Oryzias_melastigma
ENSPPRG00000011222	SMG7	99	94.611	ENSOGAG00000003107	SMG7	99	94.183	Otolemur_garnettii
ENSPPRG00000011222	SMG7	100	97.263	ENSOARG00000001352	SMG7	99	97.263	Ovis_aries
ENSPPRG00000011222	SMG7	100	97.977	ENSPPAG00000031619	SMG7	100	97.977	Pan_paniscus
ENSPPRG00000011222	SMG7	100	100.000	ENSPTIG00000007242	SMG7	100	100.000	Panthera_tigris_altaica
ENSPPRG00000011222	SMG7	100	97.977	ENSPTRG00000001764	SMG7	100	97.977	Pan_troglodytes
ENSPPRG00000011222	SMG7	100	97.977	ENSPANG00000004520	SMG7	100	97.977	Papio_anubis
ENSPPRG00000011222	SMG7	99	65.057	ENSPKIG00000007242	smg7	99	68.812	Paramormyrops_kingsleyae
ENSPPRG00000011222	SMG7	97	90.941	ENSPSIG00000012201	SMG7	99	90.501	Pelodiscus_sinensis
ENSPPRG00000011222	SMG7	71	43.535	ENSPMGG00000021833	smg7	81	71.681	Periophthalmus_magnuspinnatus
ENSPPRG00000011222	SMG7	98	95.126	ENSPEMG00000011315	Smg7	100	94.952	Peromyscus_maniculatus_bairdii
ENSPPRG00000011222	SMG7	100	92.970	ENSPCIG00000003786	SMG7	100	93.058	Phascolarctos_cinereus
ENSPPRG00000011222	SMG7	99	61.380	ENSPFOG00000019219	smg7	99	62.305	Poecilia_formosa
ENSPPRG00000011222	SMG7	99	64.182	ENSPLAG00000001446	smg7	99	64.010	Poecilia_latipinna
ENSPPRG00000011222	SMG7	96	63.363	ENSPMEG00000005218	smg7	99	63.186	Poecilia_mexicana
ENSPPRG00000011222	SMG7	87	61.614	ENSPREG00000019039	smg7	91	62.205	Poecilia_reticulata
ENSPPRG00000011222	SMG7	100	98.065	ENSPPYG00000000427	SMG7	100	98.065	Pongo_abelii
ENSPPRG00000011222	SMG7	97	83.304	ENSPCAG00000008360	SMG7	100	83.131	Procavia_capensis
ENSPPRG00000011222	SMG7	100	98.031	ENSPCOG00000011996	SMG7	99	98.031	Propithecus_coquereli
ENSPPRG00000011222	SMG7	98	86.301	ENSPVAG00000000851	SMG7	99	86.301	Pteropus_vampyrus
ENSPPRG00000011222	SMG7	99	66.294	ENSPNYG00000007643	smg7	99	65.805	Pundamilia_nyererei
ENSPPRG00000011222	SMG7	99	67.965	ENSPNAG00000011374	smg7	98	70.707	Pygocentrus_nattereri
ENSPPRG00000011222	SMG7	100	94.112	ENSRNOG00000027962	Smg7	100	96.296	Rattus_norvegicus
ENSPPRG00000011222	SMG7	100	97.889	ENSRBIG00000036316	SMG7	100	97.889	Rhinopithecus_bieti
ENSPPRG00000011222	SMG7	100	97.889	ENSRROG00000035719	SMG7	100	97.889	Rhinopithecus_roxellana
ENSPPRG00000011222	SMG7	97	97.352	ENSSBOG00000023454	SMG7	99	97.352	Saimiri_boliviensis_boliviensis
ENSPPRG00000011222	SMG7	100	92.362	ENSSHAG00000013147	SMG7	100	92.450	Sarcophilus_harrisii
ENSPPRG00000011222	SMG7	99	69.607	ENSSFOG00015017252	smg7	99	76.316	Scleropages_formosus
ENSPPRG00000011222	SMG7	99	66.494	ENSSMAG00000006067	smg7	99	66.552	Scophthalmus_maximus
ENSPPRG00000011222	SMG7	100	64.610	ENSSDUG00000017543	smg7	99	65.649	Seriola_dumerili
ENSPPRG00000011222	SMG7	99	89.488	ENSSPUG00000002064	SMG7	99	89.576	Sphenodon_punctatus
ENSPPRG00000011222	SMG7	100	66.811	ENSSPAG00000008733	smg7	100	66.494	Stegastes_partitus
ENSPPRG00000011222	SMG7	100	98.118	ENSSSCG00000015558	SMG7	99	98.147	Sus_scrofa
ENSPPRG00000011222	SMG7	99	89.515	ENSTGUG00000003928	SMG7	100	89.604	Taeniopygia_guttata
ENSPPRG00000011222	SMG7	97	63.621	ENSTNIG00000002802	smg7	99	63.583	Tetraodon_nigroviridis
ENSPPRG00000011222	SMG7	80	91.845	ENSTBEG00000003220	SMG7	81	92.489	Tupaia_belangeri
ENSPPRG00000011222	SMG7	98	95.730	ENSTTRG00000014778	SMG7	100	95.730	Tursiops_truncatus
ENSPPRG00000011222	SMG7	96	94.607	ENSUAMG00000017473	SMG7	100	94.607	Ursus_americanus
ENSPPRG00000011222	SMG7	94	98.725	ENSUMAG00000016389	SMG7	100	98.725	Ursus_maritimus
ENSPPRG00000011222	SMG7	100	98.801	ENSVVUG00000008976	SMG7	99	98.801	Vulpes_vulpes
ENSPPRG00000011222	SMG7	100	71.675	ENSXETG00000012528	smg7	100	71.639	Xenopus_tropicalis
ENSPPRG00000011222	SMG7	99	64.549	ENSXMAG00000007123	smg7	99	64.549	Xiphophorus_maculatus