EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000011901 (Gene tree)
Gene ID: 109256286
Gene Symbol: SMG5
Alias: -
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 25668 bases
Position: chrKV860410.1:2429007-2454674
Accession: 109256286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000020976	EST1	PF10374.9	2.8e-24	1	1
ENSPPRP00000020976	EST1_DNA_bind	PF10373.9	7.4e-40	1	2
ENSPPRP00000020976	EST1_DNA_bind	PF10373.9	7.4e-40	2	2
ENSPPRP00000020976	PIN_4	PF13638.6	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000019419	SMG5-201	4188	XM_019431424	ENSPPRP00000020976	987 (aa)	XP_019286969	-

Gene Model

Click here to download ENSPPRG00000011901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000011901's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000011901	SMG5	100	93.246	ENSG00000198952	SMG5	98	93.851	Homo_sapiens
ENSPPRG00000011901	SMG5	100	67.069	ENSAPOG00000019690	smg5	91	77.696	Acanthochromis_polyacanthus
ENSPPRG00000011901	SMG5	100	95.468	ENSAMEG00000014458	SMG5	100	95.468	Ailuropoda_melanoleuca
ENSPPRG00000011901	SMG5	100	64.596	ENSACIG00000001353	smg5	98	65.782	Amphilophus_citrinellus
ENSPPRG00000011901	SMG5	100	64.328	ENSAOCG00000019483	smg5	93	66.049	Amphiprion_ocellaris
ENSPPRG00000011901	SMG5	100	66.500	ENSAPEG00000022949	smg5	98	66.034	Amphiprion_percula
ENSPPRG00000011901	SMG5	100	65.647	ENSATEG00000005348	smg5	98	66.140	Anabas_testudineus
ENSPPRG00000011901	SMG5	100	77.366	ENSAPLG00000010263	SMG5	100	77.366	Anas_platyrhynchos
ENSPPRG00000011901	SMG5	100	92.843	ENSANAG00000032899	SMG5	99	93.643	Aotus_nancymaae
ENSPPRG00000011901	SMG5	100	64.356	ENSACLG00000009311	smg5	91	78.465	Astatotilapia_calliptera
ENSPPRG00000011901	SMG5	52	59.259	ENSAMXG00000024616	smg5	98	62.523	Astyanax_mexicanus
ENSPPRG00000011901	SMG5	100	92.742	ENSBTAG00000009435	SMG5	98	93.952	Bos_taurus
ENSPPRG00000011901	SMG5	99	44.212	ENSBTAG00000021747	-	97	43.656	Bos_taurus
ENSPPRG00000011901	SMG5	100	93.044	ENSCJAG00000005684	SMG5	98	93.851	Callithrix_jacchus
ENSPPRG00000011901	SMG5	100	97.062	ENSCAFG00000016839	SMG5	98	97.062	Canis_familiaris
ENSPPRG00000011901	SMG5	100	97.062	ENSCAFG00020006061	SMG5	98	97.062	Canis_lupus_dingo
ENSPPRG00000011901	SMG5	100	93.548	ENSCHIG00000007709	SMG5	98	93.548	Capra_hircus
ENSPPRG00000011901	SMG5	99	44.433	ENSCHIG00000006323	-	98	43.900	Capra_hircus
ENSPPRG00000011901	SMG5	100	93.656	ENSTSYG00000004099	SMG5	98	93.656	Carlito_syrichta
ENSPPRG00000011901	SMG5	99	71.805	ENSCAPG00000003631	SMG5	100	72.917	Cavia_aperea
ENSPPRG00000011901	SMG5	100	92.254	ENSCPOG00000015696	SMG5	98	92.555	Cavia_porcellus
ENSPPRG00000011901	SMG5	100	93.145	ENSCCAG00000027409	SMG5	99	93.946	Cebus_capucinus
ENSPPRG00000011901	SMG5	100	93.145	ENSCATG00000030539	SMG5	98	93.851	Cercocebus_atys
ENSPPRG00000011901	SMG5	100	92.857	ENSCLAG00000003983	SMG5	98	93.360	Chinchilla_lanigera
ENSPPRG00000011901	SMG5	100	93.044	ENSCSAG00000002120	SMG5	98	93.750	Chlorocebus_sabaeus
ENSPPRG00000011901	SMG5	56	87.956	ENSCHOG00000008741	-	57	87.956	Choloepus_hoffmanni
ENSPPRG00000011901	SMG5	96	75.963	ENSCPBG00000025848	SMG5	100	76.471	Chrysemys_picta_bellii
ENSPPRG00000011901	SMG5	94	34.202	ENSCING00000008706	-	97	34.202	Ciona_intestinalis
ENSPPRG00000011901	SMG5	100	89.315	ENSCANG00000029208	SMG5	98	90.323	Colobus_angolensis_palliatus
ENSPPRG00000011901	SMG5	100	90.131	ENSCGRG00001006336	Smg5	98	89.537	Cricetulus_griseus_chok1gshd
ENSPPRG00000011901	SMG5	100	90.131	ENSCGRG00000005111	Smg5	100	89.527	Cricetulus_griseus_crigri
ENSPPRG00000011901	SMG5	100	63.936	ENSCSEG00000014220	smg5	91	78.109	Cynoglossus_semilaevis
ENSPPRG00000011901	SMG5	100	59.640	ENSCVAG00000000529	smg5	97	60.040	Cyprinodon_variegatus
ENSPPRG00000011901	SMG5	93	79.597	ENSDARG00000041481	smg5	98	61.638	Danio_rerio
ENSPPRG00000011901	SMG5	100	89.113	ENSDNOG00000000051	SMG5	98	89.839	Dasypus_novemcinctus
ENSPPRG00000011901	SMG5	95	36.741	ENSDNOG00000039862	-	100	36.315	Dasypus_novemcinctus
ENSPPRG00000011901	SMG5	100	90.955	ENSDORG00000010382	Smg5	98	91.239	Dipodomys_ordii
ENSPPRG00000011901	SMG5	69	35.256	FBgn0019890	Smg5	62	35.256	Drosophila_melanogaster
ENSPPRG00000011901	SMG5	82	97.087	ENSETEG00000010336	SMG5	87	97.087	Echinops_telfairi
ENSPPRG00000011901	SMG5	93	47.034	ENSEBUG00000003739	smg5	98	46.261	Eptatretus_burgeri
ENSPPRG00000011901	SMG5	100	94.153	ENSEASG00005019122	SMG5	98	94.153	Equus_asinus_asinus
ENSPPRG00000011901	SMG5	100	94.153	ENSECAG00000001389	SMG5	98	94.153	Equus_caballus
ENSPPRG00000011901	SMG5	74	96.542	ENSEEUG00000012690	SMG5	73	96.542	Erinaceus_europaeus
ENSPPRG00000011901	SMG5	100	65.050	ENSELUG00000012585	smg5	98	64.538	Esox_lucius
ENSPPRG00000011901	SMG5	100	99.696	ENSFCAG00000011783	SMG5	98	99.696	Felis_catus
ENSPPRG00000011901	SMG5	59	80.467	ENSFALG00000001166	-	99	80.467	Ficedula_albicollis
ENSPPRG00000011901	SMG5	99	91.935	ENSFDAG00000017388	SMG5	100	91.935	Fukomys_damarensis
ENSPPRG00000011901	SMG5	99	61.476	ENSFHEG00000013939	smg5	96	67.753	Fundulus_heteroclitus
ENSPPRG00000011901	SMG5	100	61.121	ENSGMOG00000007310	smg5	90	76.329	Gadus_morhua
ENSPPRG00000011901	SMG5	100	76.000	ENSGALG00000029918	-	98	75.707	Gallus_gallus
ENSPPRG00000011901	SMG5	86	75.179	ENSGAFG00000021691	smg5	95	66.134	Gambusia_affinis
ENSPPRG00000011901	SMG5	93	76.145	ENSGACG00000013142	smg5	91	77.586	Gasterosteus_aculeatus
ENSPPRG00000011901	SMG5	100	78.037	ENSGAGG00000016131	SMG5	98	77.454	Gopherus_agassizii
ENSPPRG00000011901	SMG5	100	92.944	ENSGGOG00000010932	SMG5	98	93.750	Gorilla_gorilla
ENSPPRG00000011901	SMG5	100	64.067	ENSHBUG00000008654	smg5	91	78.465	Haplochromis_burtoni
ENSPPRG00000011901	SMG5	100	91.449	ENSHGLG00000019152	SMG5	98	91.952	Heterocephalus_glaber_female
ENSPPRG00000011901	SMG5	90	91.173	ENSHGLG00100015948	SMG5	97	91.732	Heterocephalus_glaber_male
ENSPPRG00000011901	SMG5	87	74.307	ENSHCOG00000010229	smg5	91	74.307	Hippocampus_comes
ENSPPRG00000011901	SMG5	100	61.724	ENSIPUG00000006624	Smg5	98	61.989	Ictalurus_punctatus
ENSPPRG00000011901	SMG5	100	93.548	ENSSTOG00000001780	SMG5	98	93.952	Ictidomys_tridecemlineatus
ENSPPRG00000011901	SMG5	100	90.050	ENSJJAG00000022763	Smg5	98	89.648	Jaculus_jaculus
ENSPPRG00000011901	SMG5	92	77.723	ENSKMAG00000014586	smg5	91	78.713	Kryptolebias_marmoratus
ENSPPRG00000011901	SMG5	100	65.350	ENSLBEG00000002145	smg5	98	65.114	Labrus_bergylta
ENSPPRG00000011901	SMG5	99	63.878	ENSLACG00000010521	SMG5	97	63.878	Latimeria_chalumnae
ENSPPRG00000011901	SMG5	97	78.818	ENSLOCG00000008380	smg5	91	79.397	Lepisosteus_oculatus
ENSPPRG00000011901	SMG5	99	93.946	ENSLAFG00000006241	SMG5	98	93.946	Loxodonta_africana
ENSPPRG00000011901	SMG5	100	93.044	ENSMFAG00000045357	SMG5	98	93.750	Macaca_fascicularis
ENSPPRG00000011901	SMG5	100	93.044	ENSMMUG00000000090	SMG5	98	93.750	Macaca_mulatta
ENSPPRG00000011901	SMG5	100	92.944	ENSMNEG00000044425	SMG5	98	93.649	Macaca_nemestrina
ENSPPRG00000011901	SMG5	100	87.349	ENSMLEG00000041192	SMG5	98	87.349	Mandrillus_leucophaeus
ENSPPRG00000011901	SMG5	100	60.273	ENSMAMG00000010683	smg5	100	60.000	Mastacembelus_armatus
ENSPPRG00000011901	SMG5	64	58.129	ENSMZEG00005016543	smg5	100	57.557	Maylandia_zebra
ENSPPRG00000011901	SMG5	100	62.941	ENSMZEG00005015815	smg5	98	63.386	Maylandia_zebra
ENSPPRG00000011901	SMG5	56	44.876	ENSMAUG00000000043	-	96	44.288	Mesocricetus_auratus
ENSPPRG00000011901	SMG5	100	89.225	ENSMAUG00000010381	Smg5	98	88.632	Mesocricetus_auratus
ENSPPRG00000011901	SMG5	100	93.044	ENSMICG00000002257	SMG5	98	93.851	Microcebus_murinus
ENSPPRG00000011901	SMG5	100	88.945	ENSMOCG00000016590	Smg5	98	88.744	Microtus_ochrogaster
ENSPPRG00000011901	SMG5	100	58.508	ENSMMOG00000017199	smg5	98	58.439	Mola_mola
ENSPPRG00000011901	SMG5	99	34.394	ENSMODG00000004511	-	99	33.863	Monodelphis_domestica
ENSPPRG00000011901	SMG5	87	87.384	ENSMODG00000016901	SMG5	96	88.079	Monodelphis_domestica
ENSPPRG00000011901	SMG5	77	38.845	ENSMODG00000004735	-	86	38.933	Monodelphis_domestica
ENSPPRG00000011901	SMG5	94	37.376	ENSMODG00000004532	-	81	38.522	Monodelphis_domestica
ENSPPRG00000011901	SMG5	78	37.028	ENSMODG00000010675	-	84	37.135	Monodelphis_domestica
ENSPPRG00000011901	SMG5	100	59.128	ENSMALG00000010375	smg5	98	58.559	Monopterus_albus
ENSPPRG00000011901	SMG5	100	90.332	MGP_CAROLIEiJ_G0025163	Smg5	100	98.324	Mus_caroli
ENSPPRG00000011901	SMG5	100	90.534	ENSMUSG00000001415	Smg5	99	98.324	Mus_musculus
ENSPPRG00000011901	SMG5	100	90.050	MGP_PahariEiJ_G0026606	Smg5	100	98.324	Mus_pahari
ENSPPRG00000011901	SMG5	100	90.332	MGP_SPRETEiJ_G0026104	Smg5	100	98.324	Mus_spretus
ENSPPRG00000011901	SMG5	96	95.450	ENSMPUG00000004546	SMG5	100	95.450	Mustela_putorius_furo
ENSPPRG00000011901	SMG5	100	92.254	ENSMLUG00000008518	SMG5	98	92.354	Myotis_lucifugus
ENSPPRG00000011901	SMG5	99	44.726	ENSNGAG00000012101	-	97	44.500	Nannospalax_galili
ENSPPRG00000011901	SMG5	100	90.634	ENSNGAG00000020706	Smg5	98	91.339	Nannospalax_galili
ENSPPRG00000011901	SMG5	97	62.616	ENSNBRG00000004332	smg5	96	63.412	Neolamprologus_brichardi
ENSPPRG00000011901	SMG5	100	92.742	ENSNLEG00000012439	SMG5	98	93.548	Nomascus_leucogenys
ENSPPRG00000011901	SMG5	100	86.103	ENSMEUG00000012834	SMG5	98	86.808	Notamacropus_eugenii
ENSPPRG00000011901	SMG5	100	91.431	ENSOPRG00000009152	SMG5	98	91.734	Ochotona_princeps
ENSPPRG00000011901	SMG5	100	92.540	ENSODEG00000012237	SMG5	98	93.246	Octodon_degus
ENSPPRG00000011901	SMG5	90	40.873	ENSOCUG00000023338	-	97	40.314	Oryctolagus_cuniculus
ENSPPRG00000011901	SMG5	100	93.044	ENSOCUG00000012886	SMG5	100	93.649	Oryctolagus_cuniculus
ENSPPRG00000011901	SMG5	100	63.682	ENSORLG00020013127	smg5	98	64.535	Oryzias_latipes_hni
ENSPPRG00000011901	SMG5	100	63.591	ENSORLG00015019014	smg5	98	64.841	Oryzias_latipes_hsok
ENSPPRG00000011901	SMG5	100	92.641	ENSOGAG00000004966	SMG5	98	93.347	Otolemur_garnettii
ENSPPRG00000011901	SMG5	100	93.649	ENSOARG00000005778	SMG5	98	93.649	Ovis_aries
ENSPPRG00000011901	SMG5	99	44.244	ENSOARG00000011963	-	98	43.912	Ovis_aries
ENSPPRG00000011901	SMG5	100	92.843	ENSPPAG00000011996	SMG5	98	93.649	Pan_paniscus
ENSPPRG00000011901	SMG5	99	92.418	ENSPTIG00000007892	SMG5	96	93.111	Panthera_tigris_altaica
ENSPPRG00000011901	SMG5	100	93.044	ENSPTRG00000023925	SMG5	98	93.851	Pan_troglodytes
ENSPPRG00000011901	SMG5	100	93.044	ENSPTRG00000049282	-	98	93.851	Pan_troglodytes
ENSPPRG00000011901	SMG5	100	93.145	ENSPANG00000011201	SMG5	98	93.851	Papio_anubis
ENSPPRG00000011901	SMG5	100	65.308	ENSPKIG00000009402	smg5	98	66.134	Paramormyrops_kingsleyae
ENSPPRG00000011901	SMG5	100	78.394	ENSPSIG00000015198	SMG5	100	78.593	Pelodiscus_sinensis
ENSPPRG00000011901	SMG5	100	59.831	ENSPMGG00000010465	smg5	98	59.605	Periophthalmus_magnuspinnatus
ENSPPRG00000011901	SMG5	56	46.085	ENSPEMG00000010022	-	94	44.852	Peromyscus_maniculatus_bairdii
ENSPPRG00000011901	SMG5	100	90.030	ENSPEMG00000001819	Smg5	98	89.437	Peromyscus_maniculatus_bairdii
ENSPPRG00000011901	SMG5	100	50.243	ENSPMAG00000000410	smg5	98	50.339	Petromyzon_marinus
ENSPPRG00000011901	SMG5	100	87.324	ENSPCIG00000018938	SMG5	98	87.827	Phascolarctos_cinereus
ENSPPRG00000011901	SMG5	93	76.134	ENSPFOG00000010191	smg5	98	60.018	Poecilia_formosa
ENSPPRG00000011901	SMG5	93	76.134	ENSPLAG00000009332	smg5	98	61.918	Poecilia_latipinna
ENSPPRG00000011901	SMG5	93	76.134	ENSPMEG00000014105	smg5	98	65.686	Poecilia_mexicana
ENSPPRG00000011901	SMG5	93	76.134	ENSPREG00000017713	smg5	98	61.644	Poecilia_reticulata
ENSPPRG00000011901	SMG5	100	93.145	ENSPPYG00000000723	SMG5	98	93.952	Pongo_abelii
ENSPPRG00000011901	SMG5	71	98.883	ENSPCAG00000008412	SMG5	81	98.883	Procavia_capensis
ENSPPRG00000011901	SMG5	100	93.044	ENSPCOG00000004741	SMG5	98	93.851	Propithecus_coquereli
ENSPPRG00000011901	SMG5	100	84.879	ENSPVAG00000016748	SMG5	98	84.879	Pteropus_vampyrus
ENSPPRG00000011901	SMG5	100	59.336	ENSPNYG00000013397	smg5	91	78.218	Pundamilia_nyererei
ENSPPRG00000011901	SMG5	100	61.874	ENSPNAG00000028363	smg5	98	61.481	Pygocentrus_nattereri
ENSPPRG00000011901	SMG5	100	91.037	ENSRNOG00000019590	Smg5	98	90.433	Rattus_norvegicus
ENSPPRG00000011901	SMG5	100	93.145	ENSRBIG00000027428	SMG5	98	93.851	Rhinopithecus_bieti
ENSPPRG00000011901	SMG5	100	93.044	ENSRROG00000030035	SMG5	98	93.750	Rhinopithecus_roxellana
ENSPPRG00000011901	SMG5	100	93.145	ENSSBOG00000033339	SMG5	98	93.952	Saimiri_boliviensis_boliviensis
ENSPPRG00000011901	SMG5	100	86.887	ENSSHAG00000014163	SMG5	100	87.487	Sarcophilus_harrisii
ENSPPRG00000011901	SMG5	87	40.420	ENSSHAG00000000561	-	85	40.420	Sarcophilus_harrisii
ENSPPRG00000011901	SMG5	66	38.889	ENSSHAG00000000935	-	92	39.655	Sarcophilus_harrisii
ENSPPRG00000011901	SMG5	99	34.203	ENSSHAG00000009572	-	96	32.565	Sarcophilus_harrisii
ENSPPRG00000011901	SMG5	100	66.066	ENSSFOG00015024175	smg5	98	65.572	Scleropages_formosus
ENSPPRG00000011901	SMG5	93	75.845	ENSSMAG00000013059	smg5	91	78.218	Scophthalmus_maximus
ENSPPRG00000011901	SMG5	100	59.369	ENSSDUG00000007122	smg5	98	60.054	Seriola_dumerili
ENSPPRG00000011901	SMG5	100	59.675	ENSSLDG00000011418	smg5	98	60.217	Seriola_lalandi_dorsalis
ENSPPRG00000011901	SMG5	90	80.179	ENSSARG00000012484	SMG5	97	80.179	Sorex_araneus
ENSPPRG00000011901	SMG5	96	76.190	ENSSPUG00000002260	SMG5	100	76.089	Sphenodon_punctatus
ENSPPRG00000011901	SMG5	92	76.847	ENSSPAG00000014266	smg5	97	65.839	Stegastes_partitus
ENSPPRG00000011901	SMG5	100	95.262	ENSSSCG00000006490	-	100	95.053	Sus_scrofa
ENSPPRG00000011901	SMG5	97	74.167	ENSSSCG00000039308	-	97	73.225	Sus_scrofa
ENSPPRG00000011901	SMG5	100	78.579	ENSTGUG00000003748	-	98	78.579	Taeniopygia_guttata
ENSPPRG00000011901	SMG5	100	62.512	ENSTRUG00000012580	smg5	91	76.098	Takifugu_rubripes
ENSPPRG00000011901	SMG5	100	63.861	ENSTNIG00000010303	smg5	91	74.396	Tetraodon_nigroviridis
ENSPPRG00000011901	SMG5	59	98.522	ENSTBEG00000002777	SMG5	57	98.522	Tupaia_belangeri
ENSPPRG00000011901	SMG5	97	92.484	ENSTTRG00000001401	SMG5	94	92.484	Tursiops_truncatus
ENSPPRG00000011901	SMG5	100	96.758	ENSUAMG00000013721	SMG5	98	96.758	Ursus_americanus
ENSPPRG00000011901	SMG5	100	91.717	ENSUMAG00000018041	SMG5	97	91.717	Ursus_maritimus
ENSPPRG00000011901	SMG5	99	85.368	ENSVPAG00000009446	SMG5	99	85.368	Vicugna_pacos
ENSPPRG00000011901	SMG5	100	97.062	ENSVVUG00000005887	SMG5	98	97.062	Vulpes_vulpes
ENSPPRG00000011901	SMG5	78	65.195	ENSXETG00000033791	SMG5	99	63.510	Xenopus_tropicalis
ENSPPRG00000011901	SMG5	73	75.656	ENSXCOG00000004379	smg5	94	69.231	Xiphophorus_couchianus
ENSPPRG00000011901	SMG5	93	75.418	ENSXMAG00000013499	smg5	98	65.579	Xiphophorus_maculatus