EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000011979 (Gene tree)
Gene ID: 109278200
Gene Symbol: YTHDC1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 36867 bases
Position: chrKV860274.1:25622801-25659667
Accession: 109278200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000021063	YTH	PF04146.15	2.6e-40	1	1
ENSPPRP00000021068	YTH	PF04146.15	2.8e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000019515	YTHDC1-201	3273	XM_019468364	ENSPPRP00000021063	711 (aa)	XP_019323909	UPI000904C1BD
ENSPPRT00000019519	YTHDC1-202	3351	XM_019468333	ENSPPRP00000021068	737 (aa)	XP_019323878	UPI000904BA4C

Gene Model

Click here to download ENSPPRG00000011979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000011979's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000011979	YTHDC1	100	97.425	ENSG00000083896	YTHDC1	100	97.425	Homo_sapiens
ENSPPRG00000011979	YTHDC1	57	59.574	ENSAPOG00000013997	ythdc1	57	62.264	Acanthochromis_polyacanthus
ENSPPRG00000011979	YTHDC1	100	98.509	ENSAMEG00000005688	YTHDC1	100	98.509	Ailuropoda_melanoleuca
ENSPPRG00000011979	YTHDC1	82	53.649	ENSACIG00000019728	ythdc1	80	59.649	Amphilophus_citrinellus
ENSPPRG00000011979	YTHDC1	56	62.410	ENSAOCG00000000239	ythdc1	59	67.464	Amphiprion_ocellaris
ENSPPRG00000011979	YTHDC1	50	64.960	ENSAPEG00000000618	ythdc1	53	68.946	Amphiprion_percula
ENSPPRG00000011979	YTHDC1	91	83.976	ENSAPLG00000009921	YTHDC1	60	95.082	Anas_platyrhynchos
ENSPPRG00000011979	YTHDC1	93	83.041	ENSACAG00000009697	YTHDC1	93	83.041	Anolis_carolinensis
ENSPPRG00000011979	YTHDC1	100	97.472	ENSANAG00000001522	YTHDC1	100	97.472	Aotus_nancymaae
ENSPPRG00000011979	YTHDC1	56	60.964	ENSACLG00000019371	ythdc1	59	66.029	Astatotilapia_calliptera
ENSPPRG00000011979	YTHDC1	92	65.044	ENSAMXG00000006978	ythdc1	92	65.630	Astyanax_mexicanus
ENSPPRG00000011979	YTHDC1	100	96.744	ENSBTAG00000015572	YTHDC1	100	96.744	Bos_taurus
ENSPPRG00000011979	YTHDC1	100	97.753	ENSCJAG00000009934	YTHDC1	100	97.753	Callithrix_jacchus
ENSPPRG00000011979	YTHDC1	100	98.374	ENSCAFG00000002821	YTHDC1	100	98.374	Canis_familiaris
ENSPPRG00000011979	YTHDC1	100	98.374	ENSCAFG00020027112	YTHDC1	100	98.374	Canis_lupus_dingo
ENSPPRG00000011979	YTHDC1	99	91.346	ENSCHIG00000004810	YTHDC1	98	91.346	Capra_hircus
ENSPPRG00000011979	YTHDC1	100	97.612	ENSTSYG00000011668	YTHDC1	100	97.612	Carlito_syrichta
ENSPPRG00000011979	YTHDC1	90	68.799	ENSCAPG00000008722	YTHDC1	90	67.616	Cavia_aperea
ENSPPRG00000011979	YTHDC1	100	90.028	ENSCPOG00000010929	YTHDC1	100	90.028	Cavia_porcellus
ENSPPRG00000011979	YTHDC1	100	97.472	ENSCCAG00000035754	YTHDC1	100	97.472	Cebus_capucinus
ENSPPRG00000011979	YTHDC1	100	97.561	ENSCATG00000036320	YTHDC1	100	97.561	Cercocebus_atys
ENSPPRG00000011979	YTHDC1	99	96.429	ENSCLAG00000005482	YTHDC1	99	96.429	Chinchilla_lanigera
ENSPPRG00000011979	YTHDC1	100	96.477	ENSCSAG00000005252	YTHDC1	100	96.477	Chlorocebus_sabaeus
ENSPPRG00000011979	YTHDC1	92	85.463	ENSCPBG00000021965	YTHDC1	94	86.322	Chrysemys_picta_bellii
ENSPPRG00000011979	YTHDC1	100	97.612	ENSCANG00000004769	YTHDC1	100	97.612	Colobus_angolensis_palliatus
ENSPPRG00000011979	YTHDC1	100	96.070	ENSCGRG00001000816	Ythdc1	100	96.070	Cricetulus_griseus_chok1gshd
ENSPPRG00000011979	YTHDC1	99	95.875	ENSCGRG00000009807	Ythdc1	99	95.875	Cricetulus_griseus_crigri
ENSPPRG00000011979	YTHDC1	56	61.201	ENSCSEG00000020404	ythdc1	59	66.667	Cynoglossus_semilaevis
ENSPPRG00000011979	YTHDC1	56	61.021	ENSCVAG00000022349	ythdc1	59	66.506	Cyprinodon_variegatus
ENSPPRG00000011979	YTHDC1	92	64.179	ENSDARG00000051953	ythdc1	58	79.115	Danio_rerio
ENSPPRG00000011979	YTHDC1	100	95.129	ENSDNOG00000004949	YTHDC1	100	95.129	Dasypus_novemcinctus
ENSPPRG00000011979	YTHDC1	99	97.111	ENSDORG00000013045	Ythdc1	100	97.004	Dipodomys_ordii
ENSPPRG00000011979	YTHDC1	78	100.000	ENSETEG00000001878	YTHDC1	78	100.000	Echinops_telfairi
ENSPPRG00000011979	YTHDC1	100	98.103	ENSEASG00005018383	YTHDC1	100	98.103	Equus_asinus_asinus
ENSPPRG00000011979	YTHDC1	100	97.832	ENSECAG00000018303	YTHDC1	100	98.790	Equus_caballus
ENSPPRG00000011979	YTHDC1	100	95.387	ENSEEUG00000015466	YTHDC1	100	95.387	Erinaceus_europaeus
ENSPPRG00000011979	YTHDC1	92	63.570	ENSELUG00000014029	ythdc1	57	77.692	Esox_lucius
ENSPPRG00000011979	YTHDC1	100	99.859	ENSFCAG00000026791	YTHDC1	100	99.859	Felis_catus
ENSPPRG00000011979	YTHDC1	68	88.063	ENSFALG00000006581	YTHDC1	87	95.500	Ficedula_albicollis
ENSPPRG00000011979	YTHDC1	99	96.581	ENSFDAG00000018560	YTHDC1	100	96.581	Fukomys_damarensis
ENSPPRG00000011979	YTHDC1	66	58.730	ENSFHEG00000001286	ythdc1	60	54.487	Fundulus_heteroclitus
ENSPPRG00000011979	YTHDC1	63	64.539	ENSGMOG00000018815	ythdc1	73	68.085	Gadus_morhua
ENSPPRG00000011979	YTHDC1	92	85.168	ENSGALG00000035906	YTHDC1	55	96.758	Gallus_gallus
ENSPPRG00000011979	YTHDC1	50	65.950	ENSGAFG00000001759	ythdc1	54	67.391	Gambusia_affinis
ENSPPRG00000011979	YTHDC1	57	63.023	ENSGACG00000015486	ythdc1	57	62.774	Gasterosteus_aculeatus
ENSPPRG00000011979	YTHDC1	93	86.257	ENSGAGG00000007108	YTHDC1	93	86.111	Gopherus_agassizii
ENSPPRG00000011979	YTHDC1	100	97.561	ENSGGOG00000021958	YTHDC1	100	97.561	Gorilla_gorilla
ENSPPRG00000011979	YTHDC1	56	60.964	ENSHBUG00000019288	ythdc1	59	66.029	Haplochromis_burtoni
ENSPPRG00000011979	YTHDC1	100	96.477	ENSHGLG00000006319	-	100	96.477	Heterocephalus_glaber_female
ENSPPRG00000011979	YTHDC1	94	69.065	ENSHGLG00000003239	-	57	76.291	Heterocephalus_glaber_female
ENSPPRG00000011979	YTHDC1	100	95.391	ENSHGLG00100001556	-	100	95.748	Heterocephalus_glaber_male
ENSPPRG00000011979	YTHDC1	94	68.625	ENSHGLG00100008060	-	57	73.893	Heterocephalus_glaber_male
ENSPPRG00000011979	YTHDC1	54	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSPPRG00000011979	YTHDC1	93	66.714	ENSIPUG00000018136	ythdc1	61	82.688	Ictalurus_punctatus
ENSPPRG00000011979	YTHDC1	100	97.561	ENSSTOG00000013652	YTHDC1	100	97.561	Ictidomys_tridecemlineatus
ENSPPRG00000011979	YTHDC1	91	91.098	ENSJJAG00000010268	Ythdc1	93	91.543	Jaculus_jaculus
ENSPPRG00000011979	YTHDC1	56	60.714	ENSKMAG00000006483	ythdc1	85	65.000	Kryptolebias_marmoratus
ENSPPRG00000011979	YTHDC1	64	63.725	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSPPRG00000011979	YTHDC1	87	74.034	ENSLACG00000004893	YTHDC1	92	74.268	Latimeria_chalumnae
ENSPPRG00000011979	YTHDC1	93	73.324	ENSLOCG00000003045	ythdc1	92	87.500	Lepisosteus_oculatus
ENSPPRG00000011979	YTHDC1	100	96.341	ENSLAFG00000021592	YTHDC1	100	99.160	Loxodonta_africana
ENSPPRG00000011979	YTHDC1	100	97.696	ENSMFAG00000031927	YTHDC1	100	97.696	Macaca_fascicularis
ENSPPRG00000011979	YTHDC1	100	96.612	ENSMMUG00000002265	YTHDC1	100	97.534	Macaca_mulatta
ENSPPRG00000011979	YTHDC1	100	97.612	ENSMNEG00000033751	YTHDC1	100	97.612	Macaca_nemestrina
ENSPPRG00000011979	YTHDC1	100	97.472	ENSMLEG00000042147	YTHDC1	100	97.472	Mandrillus_leucophaeus
ENSPPRG00000011979	YTHDC1	55	62.350	ENSMAMG00000013122	ythdc1	58	66.587	Mastacembelus_armatus
ENSPPRG00000011979	YTHDC1	56	60.964	ENSMZEG00005023173	ythdc1	59	66.029	Maylandia_zebra
ENSPPRG00000011979	YTHDC1	93	83.333	ENSMGAG00000010391	YTHDC1	59	94.848	Meleagris_gallopavo
ENSPPRG00000011979	YTHDC1	100	95.799	ENSMAUG00000001286	Ythdc1	100	95.799	Mesocricetus_auratus
ENSPPRG00000011979	YTHDC1	100	97.696	ENSMICG00000034640	YTHDC1	100	97.696	Microcebus_murinus
ENSPPRG00000011979	YTHDC1	100	96.070	ENSMOCG00000020201	Ythdc1	100	96.070	Microtus_ochrogaster
ENSPPRG00000011979	YTHDC1	65	57.531	ENSMODG00000009173	-	88	61.137	Monodelphis_domestica
ENSPPRG00000011979	YTHDC1	86	69.907	ENSMODG00000014337	-	95	70.951	Monodelphis_domestica
ENSPPRG00000011979	YTHDC1	93	87.994	ENSMODG00000020754	-	92	87.701	Monodelphis_domestica
ENSPPRG00000011979	YTHDC1	96	51.617	ENSMODG00000010076	-	60	61.085	Monodelphis_domestica
ENSPPRG00000011979	YTHDC1	58	67.797	ENSMALG00000013412	ythdc1	56	69.054	Monopterus_albus
ENSPPRG00000011979	YTHDC1	93	95.022	MGP_CAROLIEiJ_G0027347	Ythdc1	97	91.423	Mus_caroli
ENSPPRG00000011979	YTHDC1	93	93.851	ENSMUSG00000035851	Ythdc1	97	90.566	Mus_musculus
ENSPPRG00000011979	YTHDC1	93	94.143	MGP_PahariEiJ_G0017126	Ythdc1	97	90.755	Mus_pahari
ENSPPRG00000011979	YTHDC1	93	94.143	MGP_SPRETEiJ_G0028339	Ythdc1	97	90.755	Mus_spretus
ENSPPRG00000011979	YTHDC1	93	73.178	ENSMPUG00000001743	YTHDC1	53	97.698	Mustela_putorius_furo
ENSPPRG00000011979	YTHDC1	99	97.111	ENSMLUG00000016300	YTHDC1	100	97.111	Myotis_lucifugus
ENSPPRG00000011979	YTHDC1	59	92.417	ENSNGAG00000024000	Ythdc1	93	91.489	Nannospalax_galili
ENSPPRG00000011979	YTHDC1	60	62.349	ENSNBRG00000007663	ythdc1	70	65.777	Neolamprologus_brichardi
ENSPPRG00000011979	YTHDC1	99	96.978	ENSNLEG00000009202	YTHDC1	99	96.978	Nomascus_leucogenys
ENSPPRG00000011979	YTHDC1	82	81.940	ENSMEUG00000007128	YTHDC1	81	81.940	Notamacropus_eugenii
ENSPPRG00000011979	YTHDC1	75	98.017	ENSOPRG00000008986	YTHDC1	74	98.017	Ochotona_princeps
ENSPPRG00000011979	YTHDC1	100	95.640	ENSODEG00000001715	YTHDC1	100	95.640	Octodon_degus
ENSPPRG00000011979	YTHDC1	68	75.000	ENSONIG00000012651	ythdc1	65	68.000	Oreochromis_niloticus
ENSPPRG00000011979	YTHDC1	88	77.064	ENSOANG00000014398	YTHDC1	55	97.468	Ornithorhynchus_anatinus
ENSPPRG00000011979	YTHDC1	93	80.786	ENSOCUG00000015886	YTHDC1	56	94.059	Oryctolagus_cuniculus
ENSPPRG00000011979	YTHDC1	56	61.836	ENSORLG00000030544	ythdc1	61	67.542	Oryzias_latipes
ENSPPRG00000011979	YTHDC1	56	61.111	ENSORLG00020019316	ythdc1	61	67.542	Oryzias_latipes_hni
ENSPPRG00000011979	YTHDC1	56	62.500	ENSOMEG00000000551	ythdc1	60	65.770	Oryzias_melastigma
ENSPPRG00000011979	YTHDC1	100	96.206	ENSOGAG00000003362	YTHDC1	100	96.206	Otolemur_garnettii
ENSPPRG00000011979	YTHDC1	100	96.744	ENSOARG00000008633	YTHDC1	100	96.744	Ovis_aries
ENSPPRG00000011979	YTHDC1	100	97.425	ENSPPAG00000041315	YTHDC1	100	97.425	Pan_paniscus
ENSPPRG00000011979	YTHDC1	99	99.725	ENSPTIG00000015527	YTHDC1	100	99.725	Panthera_tigris_altaica
ENSPPRG00000011979	YTHDC1	100	97.425	ENSPTRG00000016105	YTHDC1	100	97.425	Pan_troglodytes
ENSPPRG00000011979	YTHDC1	100	97.561	ENSPANG00000021590	YTHDC1	100	97.561	Papio_anubis
ENSPPRG00000011979	YTHDC1	78	83.527	ENSPKIG00000018497	ythdc1	93	68.768	Paramormyrops_kingsleyae
ENSPPRG00000011979	YTHDC1	91	85.333	ENSPSIG00000002782	YTHDC1	92	85.185	Pelodiscus_sinensis
ENSPPRG00000011979	YTHDC1	56	57.100	ENSPMGG00000000970	-	78	58.610	Periophthalmus_magnuspinnatus
ENSPPRG00000011979	YTHDC1	99	96.159	ENSPEMG00000013850	Ythdc1	100	96.154	Peromyscus_maniculatus_bairdii
ENSPPRG00000011979	YTHDC1	93	87.848	ENSPCIG00000006870	YTHDC1	92	88.280	Phascolarctos_cinereus
ENSPPRG00000011979	YTHDC1	56	60.714	ENSPFOG00000013404	ythdc1	60	65.385	Poecilia_formosa
ENSPPRG00000011979	YTHDC1	61	57.895	ENSPLAG00000011079	ythdc1	85	65.385	Poecilia_latipinna
ENSPPRG00000011979	YTHDC1	56	60.714	ENSPMEG00000009238	ythdc1	60	65.385	Poecilia_mexicana
ENSPPRG00000011979	YTHDC1	78	58.824	ENSPREG00000016973	ythdc1	59	60.302	Poecilia_reticulata
ENSPPRG00000011979	YTHDC1	87	96.417	ENSPPYG00000014726	YTHDC1	100	96.417	Pongo_abelii
ENSPPRG00000011979	YTHDC1	78	87.791	ENSPCAG00000009607	YTHDC1	77	87.209	Procavia_capensis
ENSPPRG00000011979	YTHDC1	100	93.496	ENSPCOG00000019105	YTHDC1	100	93.496	Propithecus_coquereli
ENSPPRG00000011979	YTHDC1	100	94.993	ENSPVAG00000015551	YTHDC1	100	94.993	Pteropus_vampyrus
ENSPPRG00000011979	YTHDC1	56	60.964	ENSPNYG00000011687	ythdc1	59	66.029	Pundamilia_nyererei
ENSPPRG00000011979	YTHDC1	93	68.383	ENSPNAG00000028365	ythdc1	93	68.474	Pygocentrus_nattereri
ENSPPRG00000011979	YTHDC1	93	92.701	ENSRNOG00000001996	Ythdc1	93	93.139	Rattus_norvegicus
ENSPPRG00000011979	YTHDC1	99	96.433	ENSRBIG00000028279	YTHDC1	99	96.433	Rhinopithecus_bieti
ENSPPRG00000011979	YTHDC1	100	97.612	ENSRROG00000035028	YTHDC1	100	97.612	Rhinopithecus_roxellana
ENSPPRG00000011979	YTHDC1	100	97.832	ENSSBOG00000022353	YTHDC1	100	97.832	Saimiri_boliviensis_boliviensis
ENSPPRG00000011979	YTHDC1	93	86.823	ENSSHAG00000002538	YTHDC1	91	87.389	Sarcophilus_harrisii
ENSPPRG00000011979	YTHDC1	93	68.240	ENSSFOG00015003298	ythdc1	60	84.884	Scleropages_formosus
ENSPPRG00000011979	YTHDC1	57	59.692	ENSSMAG00000009086	ythdc1	60	65.707	Scophthalmus_maximus
ENSPPRG00000011979	YTHDC1	55	61.501	ENSSDUG00000022008	ythdc1	59	66.986	Seriola_dumerili
ENSPPRG00000011979	YTHDC1	55	61.501	ENSSLDG00000007926	ythdc1	59	66.986	Seriola_lalandi_dorsalis
ENSPPRG00000011979	YTHDC1	79	97.778	ENSSARG00000010960	YTHDC1	100	97.778	Sorex_araneus
ENSPPRG00000011979	YTHDC1	93	81.368	ENSSPUG00000009357	YTHDC1	92	80.495	Sphenodon_punctatus
ENSPPRG00000011979	YTHDC1	57	61.712	ENSSPAG00000011449	ythdc1	59	67.464	Stegastes_partitus
ENSPPRG00000011979	YTHDC1	100	97.973	ENSSSCG00000035505	YTHDC1	100	97.973	Sus_scrofa
ENSPPRG00000011979	YTHDC1	93	84.795	ENSTGUG00000004452	-	92	84.649	Taeniopygia_guttata
ENSPPRG00000011979	YTHDC1	66	58.199	ENSTRUG00000010142	ythdc1	69	70.000	Takifugu_rubripes
ENSPPRG00000011979	YTHDC1	86	59.701	ENSTNIG00000013243	ythdc1	89	64.840	Tetraodon_nigroviridis
ENSPPRG00000011979	YTHDC1	93	85.505	ENSTBEG00000011546	YTHDC1	92	86.091	Tupaia_belangeri
ENSPPRG00000011979	YTHDC1	100	96.612	ENSTTRG00000005083	YTHDC1	100	96.612	Tursiops_truncatus
ENSPPRG00000011979	YTHDC1	93	99.697	ENSUAMG00000010388	YTHDC1	100	99.697	Ursus_americanus
ENSPPRG00000011979	YTHDC1	99	83.791	ENSUMAG00000013668	YTHDC1	98	83.791	Ursus_maritimus
ENSPPRG00000011979	YTHDC1	100	97.609	ENSVPAG00000009040	YTHDC1	100	97.609	Vicugna_pacos
ENSPPRG00000011979	YTHDC1	99	99.588	ENSVVUG00000005387	YTHDC1	100	98.399	Vulpes_vulpes
ENSPPRG00000011979	YTHDC1	92	72.366	ENSXETG00000017960	ythdc1	91	71.975	Xenopus_tropicalis
ENSPPRG00000011979	YTHDC1	56	59.629	ENSXMAG00000005196	ythdc1	61	64.663	Xiphophorus_maculatus