EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000012389 (Gene tree)
Gene ID: 109259672
Gene Symbol: RPUSD1
Alias: -
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 3007 bases
Position: chrKV860482.1:428041-431047
Accession: 109259672
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000021624	PseudoU_synth_2	PF00849.22	2.2e-25	1	1
ENSPPRP00000021621	PseudoU_synth_2	PF00849.22	1.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000020101	RPUSD1-201	396	-	ENSPPRP00000021621	132 (aa)	-	-
ENSPPRT00000020108	RPUSD1-202	1873	XM_019437367	ENSPPRP00000021624	302 (aa)	XP_019292912	UPI0009048AD9

Gene Model

Click here to download ENSPPRG00000012389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000012389's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000012389	RPUSD1	99	82.443	ENSG00000007376	RPUSD1	100	85.714	Homo_sapiens
ENSPPRG00000012389	RPUSD1	98	58.609	ENSAPOG00000022221	rpusd1	98	58.940	Acanthochromis_polyacanthus
ENSPPRG00000012389	RPUSD1	100	90.397	ENSAMEG00000007461	RPUSD1	100	90.397	Ailuropoda_melanoleuca
ENSPPRG00000012389	RPUSD1	98	58.170	ENSACIG00000015863	rpusd1	98	58.497	Amphilophus_citrinellus
ENSPPRG00000012389	RPUSD1	98	57.705	ENSAOCG00000021975	rpusd1	95	58.361	Amphiprion_ocellaris
ENSPPRG00000012389	RPUSD1	98	58.033	ENSAPEG00000001316	rpusd1	95	58.689	Amphiprion_percula
ENSPPRG00000012389	RPUSD1	77	74.038	ENSATEG00000002984	rpusd1	99	58.117	Anabas_testudineus
ENSPPRG00000012389	RPUSD1	78	61.317	ENSAPLG00000012316	RPUSD1	99	61.317	Anas_platyrhynchos
ENSPPRG00000012389	RPUSD1	99	67.550	ENSACAG00000008953	RPUSD1	100	67.550	Anolis_carolinensis
ENSPPRG00000012389	RPUSD1	100	80.952	ENSANAG00000024709	RPUSD1	100	82.051	Aotus_nancymaae
ENSPPRG00000012389	RPUSD1	98	58.306	ENSACLG00000013692	rpusd1	98	58.958	Astatotilapia_calliptera
ENSPPRG00000012389	RPUSD1	99	59.333	ENSAMXG00000019802	rpusd1	100	59.333	Astyanax_mexicanus
ENSPPRG00000012389	RPUSD1	100	85.065	ENSBTAG00000000179	RPUSD1	100	85.390	Bos_taurus
ENSPPRG00000012389	RPUSD1	100	80.000	ENSCJAG00000012253	RPUSD1	100	81.731	Callithrix_jacchus
ENSPPRG00000012389	RPUSD1	100	92.053	ENSCAFG00000019614	RPUSD1	100	92.053	Canis_familiaris
ENSPPRG00000012389	RPUSD1	100	92.053	ENSCAFG00020008891	RPUSD1	100	92.053	Canis_lupus_dingo
ENSPPRG00000012389	RPUSD1	100	84.091	ENSCHIG00000012872	RPUSD1	100	84.416	Capra_hircus
ENSPPRG00000012389	RPUSD1	99	83.206	ENSTSYG00000036934	RPUSD1	100	83.206	Carlito_syrichta
ENSPPRG00000012389	RPUSD1	100	83.007	ENSCAPG00000014219	RPUSD1	100	83.007	Cavia_aperea
ENSPPRG00000012389	RPUSD1	100	83.007	ENSCPOG00000034604	RPUSD1	100	83.007	Cavia_porcellus
ENSPPRG00000012389	RPUSD1	100	80.635	ENSCCAG00000034385	RPUSD1	100	82.051	Cebus_capucinus
ENSPPRG00000012389	RPUSD1	99	83.206	ENSCATG00000042983	RPUSD1	100	83.206	Cercocebus_atys
ENSPPRG00000012389	RPUSD1	100	82.680	ENSCLAG00000013966	RPUSD1	100	82.680	Chinchilla_lanigera
ENSPPRG00000012389	RPUSD1	100	79.365	ENSCSAG00000012121	RPUSD1	100	80.769	Chlorocebus_sabaeus
ENSPPRG00000012389	RPUSD1	99	65.574	ENSCPBG00000021101	RPUSD1	99	65.574	Chrysemys_picta_bellii
ENSPPRG00000012389	RPUSD1	99	83.969	ENSCANG00000028576	RPUSD1	100	83.969	Colobus_angolensis_palliatus
ENSPPRG00000012389	RPUSD1	100	80.528	ENSCGRG00001014253	Rpusd1	100	80.528	Cricetulus_griseus_chok1gshd
ENSPPRG00000012389	RPUSD1	100	80.528	ENSCGRG00000017995	Rpusd1	100	80.528	Cricetulus_griseus_crigri
ENSPPRG00000012389	RPUSD1	78	71.845	ENSCSEG00000007648	-	100	72.816	Cynoglossus_semilaevis
ENSPPRG00000012389	RPUSD1	99	58.333	ENSCSEG00000018512	rpusd1	100	57.947	Cynoglossus_semilaevis
ENSPPRG00000012389	RPUSD1	98	57.667	ENSCVAG00000022746	rpusd1	98	57.667	Cyprinodon_variegatus
ENSPPRG00000012389	RPUSD1	99	62.333	ENSDARG00000060192	rpusd1	100	62.333	Danio_rerio
ENSPPRG00000012389	RPUSD1	100	80.844	ENSDNOG00000003721	RPUSD1	100	81.169	Dasypus_novemcinctus
ENSPPRG00000012389	RPUSD1	100	84.158	ENSDORG00000026656	Rpusd1	100	85.809	Dipodomys_ordii
ENSPPRG00000012389	RPUSD1	97	46.774	ENSEBUG00000008767	rpusd1	93	46.774	Eptatretus_burgeri
ENSPPRG00000012389	RPUSD1	100	82.445	ENSEASG00005018421	RPUSD1	76	83.228	Equus_asinus_asinus
ENSPPRG00000012389	RPUSD1	77	73.529	ENSELUG00000014307	rpusd1	88	54.426	Esox_lucius
ENSPPRG00000012389	RPUSD1	100	99.338	ENSFCAG00000010359	RPUSD1	100	99.338	Felis_catus
ENSPPRG00000012389	RPUSD1	91	75.833	ENSFALG00000003211	RPUSD1	100	66.667	Ficedula_albicollis
ENSPPRG00000012389	RPUSD1	100	82.353	ENSFDAG00000013398	RPUSD1	100	82.353	Fukomys_damarensis
ENSPPRG00000012389	RPUSD1	98	56.436	ENSFHEG00000004736	rpusd1	98	57.096	Fundulus_heteroclitus
ENSPPRG00000012389	RPUSD1	77	75.248	ENSGMOG00000010756	rpusd1	98	55.921	Gadus_morhua
ENSPPRG00000012389	RPUSD1	99	64.935	ENSGALG00000005315	RPUSD1	100	64.935	Gallus_gallus
ENSPPRG00000012389	RPUSD1	98	58.000	ENSGAFG00000009886	rpusd1	98	58.000	Gambusia_affinis
ENSPPRG00000012389	RPUSD1	95	59.712	ENSGACG00000014276	rpusd1	97	58.472	Gasterosteus_aculeatus
ENSPPRG00000012389	RPUSD1	99	65.574	ENSGAGG00000004181	RPUSD1	99	65.574	Gopherus_agassizii
ENSPPRG00000012389	RPUSD1	99	82.443	ENSGGOG00000013997	RPUSD1	100	82.443	Gorilla_gorilla
ENSPPRG00000012389	RPUSD1	98	57.980	ENSHBUG00000023728	rpusd1	98	58.632	Haplochromis_burtoni
ENSPPRG00000012389	RPUSD1	100	82.353	ENSHGLG00000002595	RPUSD1	100	82.353	Heterocephalus_glaber_female
ENSPPRG00000012389	RPUSD1	100	82.353	ENSHGLG00100014303	RPUSD1	100	82.353	Heterocephalus_glaber_male
ENSPPRG00000012389	RPUSD1	98	57.912	ENSHCOG00000002390	rpusd1	99	57.912	Hippocampus_comes
ENSPPRG00000012389	RPUSD1	78	75.728	ENSHCOG00000020005	-	97	76.699	Hippocampus_comes
ENSPPRG00000012389	RPUSD1	99	60.396	ENSIPUG00000001570	rpusd1	99	60.726	Ictalurus_punctatus
ENSPPRG00000012389	RPUSD1	100	83.333	ENSSTOG00000004276	RPUSD1	100	83.333	Ictidomys_tridecemlineatus
ENSPPRG00000012389	RPUSD1	100	82.201	ENSJJAG00000015696	Rpusd1	100	82.680	Jaculus_jaculus
ENSPPRG00000012389	RPUSD1	96	58.108	ENSKMAG00000017287	rpusd1	96	58.108	Kryptolebias_marmoratus
ENSPPRG00000012389	RPUSD1	96	57.143	ENSLBEG00000022502	rpusd1	96	57.143	Labrus_bergylta
ENSPPRG00000012389	RPUSD1	96	57.143	ENSLBEG00000013354	RPUSD1	96	57.143	Labrus_bergylta
ENSPPRG00000012389	RPUSD1	99	61.921	ENSLACG00000008869	RPUSD1	99	61.921	Latimeria_chalumnae
ENSPPRG00000012389	RPUSD1	91	69.167	ENSLOCG00000005682	rpusd1	99	73.272	Lepisosteus_oculatus
ENSPPRG00000012389	RPUSD1	100	80.795	ENSLAFG00000002115	RPUSD1	100	80.795	Loxodonta_africana
ENSPPRG00000012389	RPUSD1	99	83.206	ENSMFAG00000003961	RPUSD1	100	83.206	Macaca_fascicularis
ENSPPRG00000012389	RPUSD1	99	83.206	ENSMMUG00000000842	RPUSD1	100	83.206	Macaca_mulatta
ENSPPRG00000012389	RPUSD1	99	83.206	ENSMNEG00000042712	RPUSD1	100	83.206	Macaca_nemestrina
ENSPPRG00000012389	RPUSD1	99	83.206	ENSMLEG00000030591	RPUSD1	100	83.206	Mandrillus_leucophaeus
ENSPPRG00000012389	RPUSD1	98	59.477	ENSMAMG00000004735	rpusd1	98	59.804	Mastacembelus_armatus
ENSPPRG00000012389	RPUSD1	98	58.306	ENSMZEG00005003214	rpusd1	98	58.958	Maylandia_zebra
ENSPPRG00000012389	RPUSD1	97	65.116	ENSMGAG00000005447	RPUSD1	99	65.116	Meleagris_gallopavo
ENSPPRG00000012389	RPUSD1	91	78.333	ENSMAUG00000019998	Rpusd1	100	75.564	Mesocricetus_auratus
ENSPPRG00000012389	RPUSD1	100	83.713	ENSMICG00000017561	RPUSD1	100	84.365	Microcebus_murinus
ENSPPRG00000012389	RPUSD1	100	80.906	ENSMOCG00000014082	Rpusd1	100	81.699	Microtus_ochrogaster
ENSPPRG00000012389	RPUSD1	98	56.757	ENSMMOG00000012569	rpusd1	99	56.757	Mola_mola
ENSPPRG00000012389	RPUSD1	100	69.903	ENSMODG00000016882	RPUSD1	100	70.227	Monodelphis_domestica
ENSPPRG00000012389	RPUSD1	98	57.516	ENSMALG00000017818	rpusd1	98	58.824	Monopterus_albus
ENSPPRG00000012389	RPUSD1	100	82.201	MGP_CAROLIEiJ_G0021244	Rpusd1	100	83.007	Mus_caroli
ENSPPRG00000012389	RPUSD1	100	82.201	ENSMUSG00000041199	Rpusd1	100	83.007	Mus_musculus
ENSPPRG00000012389	RPUSD1	100	81.169	MGP_PahariEiJ_G0023562	Rpusd1	100	81.494	Mus_pahari
ENSPPRG00000012389	RPUSD1	100	82.201	MGP_SPRETEiJ_G0022155	Rpusd1	100	83.007	Mus_spretus
ENSPPRG00000012389	RPUSD1	100	90.397	ENSMPUG00000015897	RPUSD1	100	90.397	Mustela_putorius_furo
ENSPPRG00000012389	RPUSD1	100	82.857	ENSMLUG00000001089	RPUSD1	100	84.887	Myotis_lucifugus
ENSPPRG00000012389	RPUSD1	100	81.553	ENSNGAG00000003595	Rpusd1	100	82.026	Nannospalax_galili
ENSPPRG00000012389	RPUSD1	98	58.983	ENSNBRG00000006457	rpusd1	98	60.000	Neolamprologus_brichardi
ENSPPRG00000012389	RPUSD1	55	75.843	ENSNLEG00000008424	-	100	78.286	Nomascus_leucogenys
ENSPPRG00000012389	RPUSD1	100	71.053	ENSMEUG00000016049	RPUSD1	100	71.053	Notamacropus_eugenii
ENSPPRG00000012389	RPUSD1	99	77.333	ENSOPRG00000008340	RPUSD1	99	77.333	Ochotona_princeps
ENSPPRG00000012389	RPUSD1	100	81.699	ENSODEG00000016945	RPUSD1	100	81.699	Octodon_degus
ENSPPRG00000012389	RPUSD1	98	57.655	ENSONIG00000015672	rpusd1	99	58.306	Oreochromis_niloticus
ENSPPRG00000012389	RPUSD1	81	72.897	ENSOANG00000030625	-	79	73.585	Ornithorhynchus_anatinus
ENSPPRG00000012389	RPUSD1	99	58.086	ENSORLG00000013009	rpusd1	99	58.086	Oryzias_latipes
ENSPPRG00000012389	RPUSD1	99	57.756	ENSORLG00020010382	rpusd1	99	57.756	Oryzias_latipes_hni
ENSPPRG00000012389	RPUSD1	99	57.426	ENSORLG00015021354	rpusd1	99	57.426	Oryzias_latipes_hsok
ENSPPRG00000012389	RPUSD1	98	60.000	ENSOMEG00000021426	rpusd1	98	58.389	Oryzias_melastigma
ENSPPRG00000012389	RPUSD1	100	82.857	ENSOGAG00000003795	RPUSD1	100	83.654	Otolemur_garnettii
ENSPPRG00000012389	RPUSD1	100	84.091	ENSOARG00000014254	RPUSD1	100	84.091	Ovis_aries
ENSPPRG00000012389	RPUSD1	99	81.679	ENSPPAG00000034797	RPUSD1	100	82.051	Pan_paniscus
ENSPPRG00000012389	RPUSD1	100	100.000	ENSPTIG00000008545	RPUSD1	100	100.000	Panthera_tigris_altaica
ENSPPRG00000012389	RPUSD1	99	81.679	ENSPTRG00000007565	RPUSD1	100	82.051	Pan_troglodytes
ENSPPRG00000012389	RPUSD1	99	82.443	ENSPANG00000024401	RPUSD1	100	82.443	Papio_anubis
ENSPPRG00000012389	RPUSD1	99	61.311	ENSPKIG00000018890	rpusd1	91	61.311	Paramormyrops_kingsleyae
ENSPPRG00000012389	RPUSD1	99	66.230	ENSPSIG00000013945	RPUSD1	100	66.230	Pelodiscus_sinensis
ENSPPRG00000012389	RPUSD1	99	57.047	ENSPMGG00000014950	rpusd1	99	57.047	Periophthalmus_magnuspinnatus
ENSPPRG00000012389	RPUSD1	100	80.259	ENSPEMG00000000497	Rpusd1	100	81.046	Peromyscus_maniculatus_bairdii
ENSPPRG00000012389	RPUSD1	98	54.098	ENSPMAG00000001563	rpusd1	99	54.754	Petromyzon_marinus
ENSPPRG00000012389	RPUSD1	100	71.148	ENSPCIG00000021216	-	94	71.148	Phascolarctos_cinereus
ENSPPRG00000012389	RPUSD1	98	59.197	ENSPFOG00000007946	rpusd1	98	59.197	Poecilia_formosa
ENSPPRG00000012389	RPUSD1	98	59.197	ENSPLAG00000011925	rpusd1	98	59.197	Poecilia_latipinna
ENSPPRG00000012389	RPUSD1	98	58.863	ENSPMEG00000002910	rpusd1	98	58.863	Poecilia_mexicana
ENSPPRG00000012389	RPUSD1	98	58.667	ENSPREG00000019851	rpusd1	98	58.667	Poecilia_reticulata
ENSPPRG00000012389	RPUSD1	100	69.536	ENSPCAG00000002258	RPUSD1	100	69.536	Procavia_capensis
ENSPPRG00000012389	RPUSD1	100	83.974	ENSPCOG00000022582	RPUSD1	100	83.974	Propithecus_coquereli
ENSPPRG00000012389	RPUSD1	100	81.789	ENSPVAG00000013104	RPUSD1	100	82.372	Pteropus_vampyrus
ENSPPRG00000012389	RPUSD1	98	58.983	ENSPNYG00000024076	rpusd1	98	59.322	Pundamilia_nyererei
ENSPPRG00000012389	RPUSD1	99	58.863	ENSPNAG00000013806	rpusd1	100	58.863	Pygocentrus_nattereri
ENSPPRG00000012389	RPUSD1	100	81.553	ENSRNOG00000023639	Rpusd1	100	82.353	Rattus_norvegicus
ENSPPRG00000012389	RPUSD1	99	83.206	ENSRBIG00000030238	RPUSD1	100	83.206	Rhinopithecus_bieti
ENSPPRG00000012389	RPUSD1	99	83.206	ENSRROG00000036663	RPUSD1	100	83.206	Rhinopithecus_roxellana
ENSPPRG00000012389	RPUSD1	100	84.768	ENSSBOG00000033063	RPUSD1	100	84.768	Saimiri_boliviensis_boliviensis
ENSPPRG00000012389	RPUSD1	100	70.492	ENSSHAG00000013500	RPUSD1	100	70.492	Sarcophilus_harrisii
ENSPPRG00000012389	RPUSD1	99	61.258	ENSSFOG00015014394	rpusd1	99	61.258	Scleropages_formosus
ENSPPRG00000012389	RPUSD1	83	71.429	ENSSMAG00000008045	rpusd1	91	57.377	Scophthalmus_maximus
ENSPPRG00000012389	RPUSD1	82	72.072	ENSSDUG00000001829	rpusd1	95	60.000	Seriola_dumerili
ENSPPRG00000012389	RPUSD1	82	72.072	ENSSLDG00000020853	rpusd1	95	60.000	Seriola_lalandi_dorsalis
ENSPPRG00000012389	RPUSD1	55	88.623	ENSSARG00000011187	-	100	88.623	Sorex_araneus
ENSPPRG00000012389	RPUSD1	62	54.922	ENSSPUG00000005119	-	100	54.922	Sphenodon_punctatus
ENSPPRG00000012389	RPUSD1	98	57.705	ENSSPAG00000012708	rpusd1	98	58.361	Stegastes_partitus
ENSPPRG00000012389	RPUSD1	100	82.222	ENSSSCG00000008000	RPUSD1	99	86.381	Sus_scrofa
ENSPPRG00000012389	RPUSD1	83	80.734	ENSTGUG00000015375	RPUSD1	100	72.941	Taeniopygia_guttata
ENSPPRG00000012389	RPUSD1	98	56.536	ENSTRUG00000003041	rpusd1	98	56.536	Takifugu_rubripes
ENSPPRG00000012389	RPUSD1	98	54.054	ENSTNIG00000002660	rpusd1	99	54.054	Tetraodon_nigroviridis
ENSPPRG00000012389	RPUSD1	100	83.175	ENSTTRG00000010167	RPUSD1	100	83.974	Tursiops_truncatus
ENSPPRG00000012389	RPUSD1	100	91.391	ENSUAMG00000012736	RPUSD1	100	91.391	Ursus_americanus
ENSPPRG00000012389	RPUSD1	100	91.722	ENSUMAG00000021174	RPUSD1	100	91.722	Ursus_maritimus
ENSPPRG00000012389	RPUSD1	100	90.066	ENSVVUG00000012357	RPUSD1	100	90.066	Vulpes_vulpes
ENSPPRG00000012389	RPUSD1	100	62.500	ENSXETG00000007184	rpusd1	100	62.500	Xenopus_tropicalis
ENSPPRG00000012389	RPUSD1	98	58.000	ENSXCOG00000017930	rpusd1	98	58.000	Xiphophorus_couchianus
ENSPPRG00000012389	RPUSD1	98	57.667	ENSXMAG00000024084	rpusd1	98	57.667	Xiphophorus_maculatus