EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000012562 (Gene tree)
Gene ID: 109254744
Gene Symbol: -
Alias: -
Full Name: snail family transcriptional repressor 2
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 3154 bases
Position: chrKV860393.1:1864482-1867635
Accession: 109254744
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000021887	zf-C2H2	PF00096.26	1.7e-27	1	5
ENSPPRP00000021887	zf-C2H2	PF00096.26	1.7e-27	2	5
ENSPPRP00000021887	zf-C2H2	PF00096.26	1.7e-27	3	5
ENSPPRP00000021887	zf-C2H2	PF00096.26	1.7e-27	4	5
ENSPPRP00000021887	zf-C2H2	PF00096.26	1.7e-27	5	5
ENSPPRP00000021887	zf-met	PF12874.7	2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000020370	-	807	XM_019428895	ENSPPRP00000021887	268 (aa)	XP_019284439	UPI0009049E1C

Gene Model

Click here to download ENSPPRG00000012562's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000012562's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000012562	-	57	33.333	ENSPPRG00000007308	ZNF526	52	35.000
ENSPPRG00000012562	-	53	38.806	ENSPPRG00000014318	ZNF317	69	38.806
ENSPPRG00000012562	-	53	44.030	ENSPPRG00000011201	-	81	44.030
ENSPPRG00000012562	-	56	40.299	ENSPPRG00000000109	-	66	40.299
ENSPPRG00000012562	-	53	42.308	ENSPPRG00000013523	ZNF865	61	38.667
ENSPPRG00000012562	-	53	44.231	ENSPPRG00000004208	ZNF768	56	39.850
ENSPPRG00000012562	-	53	40.146	ENSPPRG00000001020	PRDM5	67	40.146
ENSPPRG00000012562	-	99	51.471	ENSPPRG00000013272	SNAI1	98	52.206
ENSPPRG00000012562	-	83	40.000	ENSPPRG00000013475	ZNF550	59	40.000
ENSPPRG00000012562	-	57	35.075	ENSPPRG00000015444	ZNF319	75	35.075
ENSPPRG00000012562	-	63	38.889	ENSPPRG00000002587	ZNF81	52	38.889
ENSPPRG00000012562	-	52	43.269	ENSPPRG00000007804	ZFP1	57	43.269
ENSPPRG00000012562	-	53	42.593	ENSPPRG00000014343	ZNF226	72	42.593
ENSPPRG00000012562	-	99	46.377	ENSPPRG00000008511	SNAI3	99	47.653
ENSPPRG00000012562	-	65	37.736	ENSPPRG00000011771	ZNF574	50	38.095
ENSPPRG00000012562	-	58	36.429	ENSPPRG00000014300	ZNF234	78	42.424
ENSPPRG00000012562	-	52	37.179	ENSPPRG00000001901	ZBTB41	50	36.232
ENSPPRG00000012562	-	59	39.259	ENSPPRG00000014617	ZNF235	66	39.259
ENSPPRG00000012562	-	80	50.000	ENSPPRG00000012906	ZNF236	54	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000012562	-	100	97.761	ENSG00000019549	SNAI2	100	97.761	Homo_sapiens
ENSPPRG00000012562	-	99	49.488	ENSG00000185669	SNAI3	99	49.164	Homo_sapiens
ENSPPRG00000012562	-	100	99.254	ENSAMEG00000009606	SNAI2	100	99.254	Ailuropoda_melanoleuca
ENSPPRG00000012562	-	99	47.231	ENSANAG00000032748	SNAI3	99	46.906	Aotus_nancymaae
ENSPPRG00000012562	-	100	97.761	ENSANAG00000021163	SNAI2	100	97.761	Aotus_nancymaae
ENSPPRG00000012562	-	99	45.364	ENSBTAG00000017528	SNAI3	99	46.026	Bos_taurus
ENSPPRG00000012562	-	100	94.030	ENSBTAG00000013227	SNAI2	100	94.030	Bos_taurus
ENSPPRG00000012562	-	100	97.761	ENSCJAG00000013499	SNAI2	100	97.761	Callithrix_jacchus
ENSPPRG00000012562	-	100	98.507	ENSCAFG00000006638	SNAI2	100	98.507	Canis_familiaris
ENSPPRG00000012562	-	100	98.507	ENSCAFG00020015384	SNAI2	100	98.507	Canis_lupus_dingo
ENSPPRG00000012562	-	99	46.689	ENSCHIG00000018087	SNAI3	99	46.154	Capra_hircus
ENSPPRG00000012562	-	100	93.657	ENSCHIG00000024410	SNAI2	100	93.657	Capra_hircus
ENSPPRG00000012562	-	90	96.680	ENSTSYG00000030892	SNAI2	90	96.680	Carlito_syrichta
ENSPPRG00000012562	-	53	72.000	ENSTSYG00000025594	SNAI3	52	72.000	Carlito_syrichta
ENSPPRG00000012562	-	83	96.861	ENSCAPG00000013078	SNAI2	100	96.861	Cavia_aperea
ENSPPRG00000012562	-	100	97.761	ENSCCAG00000024100	SNAI2	100	97.761	Cebus_capucinus
ENSPPRG00000012562	-	99	47.557	ENSCATG00000031714	SNAI3	99	47.557	Cercocebus_atys
ENSPPRG00000012562	-	100	97.761	ENSCATG00000028656	SNAI2	100	97.761	Cercocebus_atys
ENSPPRG00000012562	-	100	97.761	ENSCLAG00000011797	SNAI2	100	97.761	Chinchilla_lanigera
ENSPPRG00000012562	-	100	97.761	ENSCSAG00000014787	SNAI2	100	97.761	Chlorocebus_sabaeus
ENSPPRG00000012562	-	99	51.701	ENSCPBG00000023474	SNAI3	99	51.701	Chrysemys_picta_bellii
ENSPPRG00000012562	-	100	94.776	ENSCPBG00000020255	SNAI2	100	94.776	Chrysemys_picta_bellii
ENSPPRG00000012562	-	50	65.672	ENSCSAVG00000009819	-	81	57.962	Ciona_savignyi
ENSPPRG00000012562	-	100	97.761	ENSCANG00000029656	SNAI2	100	97.761	Colobus_angolensis_palliatus
ENSPPRG00000012562	-	100	96.642	ENSCGRG00001013674	Snai2	100	96.642	Cricetulus_griseus_chok1gshd
ENSPPRG00000012562	-	99	48.432	ENSCGRG00001011389	Snai3	99	47.735	Cricetulus_griseus_chok1gshd
ENSPPRG00000012562	-	100	96.642	ENSCGRG00000012119	Snai2	100	96.642	Cricetulus_griseus_crigri
ENSPPRG00000012562	-	99	48.432	ENSCGRG00000014932	Snai3	99	47.735	Cricetulus_griseus_crigri
ENSPPRG00000012562	-	78	34.529	ENSDNOG00000035204	-	100	32.609	Dasypus_novemcinctus
ENSPPRG00000012562	-	100	94.403	ENSDORG00000029620	Snai2	100	94.403	Dipodomys_ordii
ENSPPRG00000012562	-	99	47.945	ENSECAG00000012131	SNAI3	99	47.635	Equus_caballus
ENSPPRG00000012562	-	99	56.747	ENSELUG00000018742	-	99	55.903	Esox_lucius
ENSPPRG00000012562	-	100	81.343	ENSELUG00000021795	SNAI2	79	80.224	Esox_lucius
ENSPPRG00000012562	-	99	47.670	ENSFCAG00000043885	SNAI3	99	46.931	Felis_catus
ENSPPRG00000012562	-	89	63.866	ENSFALG00000012974	-	98	65.546	Ficedula_albicollis
ENSPPRG00000012562	-	100	98.507	ENSFDAG00000016958	SNAI2	100	98.507	Fukomys_damarensis
ENSPPRG00000012562	-	99	53.220	ENSGAGG00000023571	SNAI3	99	52.542	Gopherus_agassizii
ENSPPRG00000012562	-	100	94.776	ENSGAGG00000000426	SNAI2	100	94.776	Gopherus_agassizii
ENSPPRG00000012562	-	99	48.322	ENSGGOG00000012559	SNAI3	99	46.254	Gorilla_gorilla
ENSPPRG00000012562	-	100	97.761	ENSGGOG00000000959	SNAI2	100	97.761	Gorilla_gorilla
ENSPPRG00000012562	-	100	76.208	ENSHCOG00000019435	SNAI2	100	76.208	Hippocampus_comes
ENSPPRG00000012562	-	100	70.896	ENSIPUG00000000131	snai2	100	70.522	Ictalurus_punctatus
ENSPPRG00000012562	-	100	98.134	ENSSTOG00000028743	SNAI2	100	98.134	Ictidomys_tridecemlineatus
ENSPPRG00000012562	-	99	47.959	ENSJJAG00000019934	Snai3	99	45.779	Jaculus_jaculus
ENSPPRG00000012562	-	100	88.060	ENSLOCG00000005992	SNAI2	100	88.060	Lepisosteus_oculatus
ENSPPRG00000012562	-	52	86.429	ENSLOCG00000004887	SNAI3	92	83.444	Lepisosteus_oculatus
ENSPPRG00000012562	-	99	57.934	ENSLAFG00000005117	SNAI3	99	57.934	Loxodonta_africana
ENSPPRG00000012562	-	100	97.015	ENSLAFG00000009299	SNAI2	100	97.015	Loxodonta_africana
ENSPPRG00000012562	-	100	97.761	ENSMFAG00000046061	SNAI2	100	97.761	Macaca_fascicularis
ENSPPRG00000012562	-	99	49.835	ENSMFAG00000032064	SNAI3	99	48.845	Macaca_fascicularis
ENSPPRG00000012562	-	100	97.761	ENSMMUG00000016195	SNAI2	100	97.761	Macaca_mulatta
ENSPPRG00000012562	-	99	49.835	ENSMMUG00000008716	SNAI3	99	48.845	Macaca_mulatta
ENSPPRG00000012562	-	99	50.165	ENSMNEG00000045515	SNAI3	99	49.175	Macaca_nemestrina
ENSPPRG00000012562	-	100	97.761	ENSMNEG00000034216	SNAI2	100	97.761	Macaca_nemestrina
ENSPPRG00000012562	-	85	54.852	ENSMLEG00000033191	SNAI3	75	54.852	Mandrillus_leucophaeus
ENSPPRG00000012562	-	100	97.761	ENSMLEG00000034407	SNAI2	100	97.761	Mandrillus_leucophaeus
ENSPPRG00000012562	-	100	96.269	ENSMAUG00000008119	Snai2	100	96.269	Mesocricetus_auratus
ENSPPRG00000012562	-	100	96.269	ENSMOCG00000006622	Snai2	100	96.269	Microtus_ochrogaster
ENSPPRG00000012562	-	100	95.522	ENSMODG00000010173	SNAI2	100	95.522	Monodelphis_domestica
ENSPPRG00000012562	-	100	95.911	MGP_CAROLIEiJ_G0020483	Snai2	100	95.911	Mus_caroli
ENSPPRG00000012562	-	100	95.167	ENSMUSG00000022676	Snai2	100	95.167	Mus_musculus
ENSPPRG00000012562	-	100	95.911	MGP_PahariEiJ_G0016188	Snai2	100	95.911	Mus_pahari
ENSPPRG00000012562	-	100	95.539	MGP_SPRETEiJ_G0021379	Snai2	100	95.539	Mus_spretus
ENSPPRG00000012562	-	99	49.123	ENSMPUG00000008104	SNAI3	99	45.631	Mustela_putorius_furo
ENSPPRG00000012562	-	100	99.254	ENSMPUG00000010793	SNAI2	100	99.254	Mustela_putorius_furo
ENSPPRG00000012562	-	100	97.015	ENSMLUG00000001086	SNAI2	100	97.015	Myotis_lucifugus
ENSPPRG00000012562	-	99	48.630	ENSNGAG00000023039	Snai3	99	48.958	Nannospalax_galili
ENSPPRG00000012562	-	100	97.761	ENSNLEG00000013421	SNAI2	100	97.761	Nomascus_leucogenys
ENSPPRG00000012562	-	99	48.993	ENSNLEG00000000595	SNAI3	99	46.580	Nomascus_leucogenys
ENSPPRG00000012562	-	97	95.402	ENSMEUG00000009510	SNAI2	100	95.402	Notamacropus_eugenii
ENSPPRG00000012562	-	100	94.776	ENSOANG00000007267	SNAI2	100	94.776	Ornithorhynchus_anatinus
ENSPPRG00000012562	-	99	48.432	ENSOGAG00000000419	SNAI3	99	48.639	Otolemur_garnettii
ENSPPRG00000012562	-	100	93.657	ENSOARG00000013030	SNAI2	100	93.657	Ovis_aries
ENSPPRG00000012562	-	99	47.987	ENSPPAG00000043301	SNAI3	99	45.928	Pan_paniscus
ENSPPRG00000012562	-	100	97.761	ENSPPAG00000015662	SNAI2	100	97.761	Pan_paniscus
ENSPPRG00000012562	-	90	100.000	ENSPTIG00000007593	SNAI2	77	100.000	Panthera_tigris_altaica
ENSPPRG00000012562	-	100	97.761	ENSPTRG00000020235	SNAI2	100	97.761	Pan_troglodytes
ENSPPRG00000012562	-	99	48.322	ENSPTRG00000008460	SNAI3	99	49.338	Pan_troglodytes
ENSPPRG00000012562	-	100	97.761	ENSPANG00000017540	SNAI2	100	97.761	Papio_anubis
ENSPPRG00000012562	-	99	47.883	ENSPANG00000000509	SNAI3	99	47.883	Papio_anubis
ENSPPRG00000012562	-	100	86.194	ENSPKIG00000002254	SNAI2	100	86.194	Paramormyrops_kingsleyae
ENSPPRG00000012562	-	99	54.483	ENSPKIG00000007872	SNAI3	99	53.793	Paramormyrops_kingsleyae
ENSPPRG00000012562	-	86	57.447	ENSPSIG00000004262	SNAI3	56	80.986	Pelodiscus_sinensis
ENSPPRG00000012562	-	100	94.403	ENSPSIG00000016395	SNAI2	100	94.403	Pelodiscus_sinensis
ENSPPRG00000012562	-	100	79.851	ENSPMGG00000013179	SNAI2	100	78.358	Periophthalmus_magnuspinnatus
ENSPPRG00000012562	-	100	96.269	ENSPEMG00000011739	Snai2	100	96.269	Peromyscus_maniculatus_bairdii
ENSPPRG00000012562	-	100	95.896	ENSPCIG00000025156	SNAI2	100	95.896	Phascolarctos_cinereus
ENSPPRG00000012562	-	90	80.992	ENSPREG00000008528	SNAI2	86	79.339	Poecilia_reticulata
ENSPPRG00000012562	-	100	97.761	ENSPPYG00000018578	SNAI2	100	97.761	Pongo_abelii
ENSPPRG00000012562	-	99	47.697	ENSPPYG00000007643	SNAI3	99	49.669	Pongo_abelii
ENSPPRG00000012562	-	100	98.507	ENSPCOG00000015656	SNAI2	100	98.507	Propithecus_coquereli
ENSPPRG00000012562	-	100	98.134	ENSPVAG00000009457	SNAI2	100	98.134	Pteropus_vampyrus
ENSPPRG00000012562	-	100	97.761	ENSRBIG00000041133	SNAI2	100	97.761	Rhinopithecus_bieti
ENSPPRG00000012562	-	99	49.186	ENSRBIG00000025770	SNAI3	99	49.186	Rhinopithecus_bieti
ENSPPRG00000012562	-	100	97.761	ENSRROG00000032273	SNAI2	100	97.761	Rhinopithecus_roxellana
ENSPPRG00000012562	-	99	48.534	ENSRROG00000032757	SNAI3	99	48.845	Rhinopithecus_roxellana
ENSPPRG00000012562	-	100	97.761	ENSSBOG00000035774	SNAI2	100	97.761	Saimiri_boliviensis_boliviensis
ENSPPRG00000012562	-	100	95.896	ENSSHAG00000004205	SNAI2	100	95.896	Sarcophilus_harrisii
ENSPPRG00000012562	-	100	84.444	ENSSFOG00015018025	SNAI2	100	84.444	Scleropages_formosus
ENSPPRG00000012562	-	99	48.693	ENSSFOG00015016115	snai3	93	50.495	Scleropages_formosus
ENSPPRG00000012562	-	100	94.776	ENSSPUG00000005427	-	100	94.776	Sphenodon_punctatus
ENSPPRG00000012562	-	100	95.896	ENSSSCG00000039568	SNAI2	100	95.896	Sus_scrofa
ENSPPRG00000012562	-	86	99.130	ENSUAMG00000014942	SNAI2	100	99.130	Ursus_americanus
ENSPPRG00000012562	-	99	50.172	ENSUAMG00000020030	SNAI3	99	48.197	Ursus_americanus
ENSPPRG00000012562	-	98	98.859	ENSUMAG00000006525	SNAI2	100	98.859	Ursus_maritimus
ENSPPRG00000012562	-	99	47.766	ENSVVUG00000003233	SNAI3	99	45.484	Vulpes_vulpes
ENSPPRG00000012562	-	100	98.881	ENSVVUG00000017625	SNAI2	100	98.881	Vulpes_vulpes
ENSPPRG00000012562	-	100	90.299	ENSXETG00000024006	snai2	100	90.299	Xenopus_tropicalis