EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000012603 (Gene tree)
Gene ID: 109264919
Gene Symbol: NCL
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 9595 bases
Position: chrKV860284.1:9413581-9423175
Accession: 109264919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000021940	RRM_1	PF00076.22	1.7e-58	1	4
ENSPPRP00000021940	RRM_1	PF00076.22	1.7e-58	2	4
ENSPPRP00000021940	RRM_1	PF00076.22	1.7e-58	3	4
ENSPPRP00000021940	RRM_1	PF00076.22	1.7e-58	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000020423	NCL-201	2725	XM_019445596	ENSPPRP00000021940	715 (aa)	XP_019301141	UPI0009057B83

Gene Model

Click here to download ENSPPRG00000012603's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000012603's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000012603	NCL	92	89.313	ENSG00000115053	NCL	100	90.934	Homo_sapiens
ENSPPRG00000012603	NCL	53	99.208	ENSAMEG00000016289	NCL	92	93.769	Ailuropoda_melanoleuca
ENSPPRG00000012603	NCL	92	89.634	ENSANAG00000035814	-	100	90.237	Aotus_nancymaae
ENSPPRG00000012603	NCL	99	70.780	ENSANAG00000024378	-	85	84.091	Aotus_nancymaae
ENSPPRG00000012603	NCL	77	92.977	ENSBTAG00000026909	-	95	92.977	Bos_taurus
ENSPPRG00000012603	NCL	54	90.574	ENSBTAG00000050728	-	81	90.574	Bos_taurus
ENSPPRG00000012603	NCL	94	87.573	ENSBTAG00000016174	NCL	100	90.193	Bos_taurus
ENSPPRG00000012603	NCL	92	84.697	ENSCJAG00000013538	NCL	100	87.083	Callithrix_jacchus
ENSPPRG00000012603	NCL	92	94.809	ENSCAFG00000011037	NCL	92	94.809	Canis_familiaris
ENSPPRG00000012603	NCL	84	94.518	ENSCAFG00020023145	NCL	96	95.245	Canis_lupus_dingo
ENSPPRG00000012603	NCL	85	88.468	ENSCHIG00000010894	-	98	89.954	Capra_hircus
ENSPPRG00000012603	NCL	73	93.931	ENSCHIG00000021052	-	98	96.503	Capra_hircus
ENSPPRG00000012603	NCL	92	64.122	ENSCHIG00000012143	-	92	73.979	Capra_hircus
ENSPPRG00000012603	NCL	92	81.184	ENSCHIG00000026149	-	93	81.487	Capra_hircus
ENSPPRG00000012603	NCL	92	87.860	ENSTSYG00000004355	-	92	87.709	Carlito_syrichta
ENSPPRG00000012603	NCL	90	74.806	ENSTSYG00000036886	-	91	75.725	Carlito_syrichta
ENSPPRG00000012603	NCL	95	85.417	ENSTSYG00000029779	-	98	84.615	Carlito_syrichta
ENSPPRG00000012603	NCL	91	80.275	ENSCAPG00000009405	NCL	91	80.428	Cavia_aperea
ENSPPRG00000012603	NCL	92	83.333	ENSCPOG00000001034	NCL	100	84.861	Cavia_porcellus
ENSPPRG00000012603	NCL	56	88.945	ENSCCAG00000000551	-	76	89.055	Cebus_capucinus
ENSPPRG00000012603	NCL	53	96.834	ENSCCAG00000021040	-	100	88.392	Cebus_capucinus
ENSPPRG00000012603	NCL	92	89.650	ENSCATG00000037033	NCL	100	90.934	Cercocebus_atys
ENSPPRG00000012603	NCL	92	82.273	ENSCLAG00000013080	NCL	100	83.611	Chinchilla_lanigera
ENSPPRG00000012603	NCL	62	97.500	ENSCSAG00000006660	NCL	95	97.500	Chlorocebus_sabaeus
ENSPPRG00000012603	NCL	62	76.136	ENSCHOG00000012860	NCL	88	75.566	Choloepus_hoffmanni
ENSPPRG00000012603	NCL	54	92.526	ENSCANG00000036756	NCL	94	95.455	Colobus_angolensis_palliatus
ENSPPRG00000012603	NCL	92	68.769	ENSCGRG00001022350	-	95	68.882	Cricetulus_griseus_chok1gshd
ENSPPRG00000012603	NCL	92	81.791	ENSCGRG00001024315	-	91	82.398	Cricetulus_griseus_chok1gshd
ENSPPRG00000012603	NCL	92	68.366	ENSCGRG00000000507	-	93	67.273	Cricetulus_griseus_crigri
ENSPPRG00000012603	NCL	85	81.361	ENSCGRG00000017894	-	88	82.899	Cricetulus_griseus_crigri
ENSPPRG00000012603	NCL	92	86.474	ENSDNOG00000010783	-	92	87.234	Dasypus_novemcinctus
ENSPPRG00000012603	NCL	100	76.323	ENSDNOG00000046347	-	99	75.905	Dasypus_novemcinctus
ENSPPRG00000012603	NCL	51	73.224	ENSDORG00000023596	-	92	67.945	Dipodomys_ordii
ENSPPRG00000012603	NCL	53	83.377	ENSDORG00000012513	-	91	76.641	Dipodomys_ordii
ENSPPRG00000012603	NCL	53	90.186	ENSETEG00000014756	-	86	90.237	Echinops_telfairi
ENSPPRG00000012603	NCL	72	66.396	ENSETEG00000008139	-	89	66.216	Echinops_telfairi
ENSPPRG00000012603	NCL	62	61.036	ENSETEG00000008553	-	88	60.674	Echinops_telfairi
ENSPPRG00000012603	NCL	85	81.967	ENSETEG00000018937	-	85	82.295	Echinops_telfairi
ENSPPRG00000012603	NCL	89	90.994	ENSEASG00005008488	NCL	94	99.286	Equus_asinus_asinus
ENSPPRG00000012603	NCL	100	91.389	ENSECAG00000021868	NCL	92	91.818	Equus_caballus
ENSPPRG00000012603	NCL	85	81.833	ENSEEUG00000005913	NCL	85	80.851	Erinaceus_europaeus
ENSPPRG00000012603	NCL	100	99.163	ENSFCAG00000027622	NCL	100	99.163	Felis_catus
ENSPPRG00000012603	NCL	91	85.933	ENSFDAG00000014291	NCL	100	85.714	Fukomys_damarensis
ENSPPRG00000012603	NCL	92	89.346	ENSGGOG00000004300	NCL	100	90.516	Gorilla_gorilla
ENSPPRG00000012603	NCL	91	76.758	ENSHGLG00000011069	-	62	80.405	Heterocephalus_glaber_female
ENSPPRG00000012603	NCL	92	85.758	ENSHGLG00000002031	-	100	85.278	Heterocephalus_glaber_female
ENSPPRG00000012603	NCL	57	79.462	ENSHGLG00100000745	-	59	84.881	Heterocephalus_glaber_male
ENSPPRG00000012603	NCL	53	93.931	ENSHGLG00100014537	-	100	84.722	Heterocephalus_glaber_male
ENSPPRG00000012603	NCL	55	82.097	ENSJJAG00000016165	Ncl	93	78.215	Jaculus_jaculus
ENSPPRG00000012603	NCL	91	74.809	ENSLAFG00000013061	NCL	91	73.820	Loxodonta_africana
ENSPPRG00000012603	NCL	92	89.802	ENSMFAG00000040385	NCL	100	90.934	Macaca_fascicularis
ENSPPRG00000012603	NCL	92	89.802	ENSMMUG00000018094	NCL	100	90.934	Macaca_mulatta
ENSPPRG00000012603	NCL	62	93.018	ENSMNEG00000023839	NCL	86	99.286	Macaca_nemestrina
ENSPPRG00000012603	NCL	92	89.802	ENSMLEG00000028935	NCL	100	91.074	Mandrillus_leucophaeus
ENSPPRG00000012603	NCL	100	88.285	ENSMICG00000002538	-	92	88.128	Microcebus_murinus
ENSPPRG00000012603	NCL	92	71.341	ENSMICG00000029975	-	86	81.560	Microcebus_murinus
ENSPPRG00000012603	NCL	92	77.845	MGP_CAROLIEiJ_G0014362	Ncl	92	79.059	Mus_caroli
ENSPPRG00000012603	NCL	92	77.238	ENSMUSG00000026234	Ncl	92	78.452	Mus_musculus
ENSPPRG00000012603	NCL	92	77.307	MGP_PahariEiJ_G0027599	Ncl	92	77.458	Mus_pahari
ENSPPRG00000012603	NCL	92	77.121	MGP_SPRETEiJ_G0015164	Ncl	92	78.485	Mus_spretus
ENSPPRG00000012603	NCL	92	87.292	ENSMLUG00000014547	NCL	92	88.502	Myotis_lucifugus
ENSPPRG00000012603	NCL	92	80.597	ENSNGAG00000002454	-	91	80.781	Nannospalax_galili
ENSPPRG00000012603	NCL	72	73.134	ENSNGAG00000006188	-	54	72.559	Nannospalax_galili
ENSPPRG00000012603	NCL	85	76.364	ENSNLEG00000014107	-	95	78.506	Nomascus_leucogenys
ENSPPRG00000012603	NCL	91	80.822	ENSODEG00000003281	-	91	80.699	Octodon_degus
ENSPPRG00000012603	NCL	91	65.009	ENSODEG00000007803	-	90	64.476	Octodon_degus
ENSPPRG00000012603	NCL	62	79.505	ENSODEG00000002441	-	91	85.169	Octodon_degus
ENSPPRG00000012603	NCL	92	79.116	ENSOCUG00000004312	NCL	100	80.028	Oryctolagus_cuniculus
ENSPPRG00000012603	NCL	77	87.863	ENSOGAG00000027852	NCL	83	87.863	Otolemur_garnettii
ENSPPRG00000012603	NCL	88	85.567	ENSOARG00000013270	-	100	90.110	Ovis_aries
ENSPPRG00000012603	NCL	91	83.182	ENSOARG00000020709	-	92	83.030	Ovis_aries
ENSPPRG00000012603	NCL	70	90.703	ENSOARG00000013710	-	94	79.412	Ovis_aries
ENSPPRG00000012603	NCL	54	80.570	ENSOARG00000004072	-	92	71.669	Ovis_aries
ENSPPRG00000012603	NCL	92	88.702	ENSPPAG00000011619	NCL	100	93.160	Pan_paniscus
ENSPPRG00000012603	NCL	99	99.859	ENSPTIG00000010393	NCL	99	99.859	Panthera_tigris_altaica
ENSPPRG00000012603	NCL	92	90.107	ENSPTRG00000013025	NCL	100	93.485	Pan_troglodytes
ENSPPRG00000012603	NCL	92	89.802	ENSPANG00000010292	NCL	100	90.934	Papio_anubis
ENSPPRG00000012603	NCL	100	84.379	ENSPPYG00000013265	NCL	92	83.510	Pongo_abelii
ENSPPRG00000012603	NCL	91	82.515	ENSPCOG00000004160	-	94	82.675	Propithecus_coquereli
ENSPPRG00000012603	NCL	92	88.485	ENSPCOG00000003051	-	91	88.485	Propithecus_coquereli
ENSPPRG00000012603	NCL	92	89.074	ENSPVAG00000000297	NCL	100	89.986	Pteropus_vampyrus
ENSPPRG00000012603	NCL	92	79.154	ENSRNOG00000018273	Ncl	92	79.909	Rattus_norvegicus
ENSPPRG00000012603	NCL	92	85.496	ENSRBIG00000037525	-	91	85.344	Rhinopithecus_bieti
ENSPPRG00000012603	NCL	66	97.578	ENSRBIG00000035396	-	88	95.638	Rhinopithecus_bieti
ENSPPRG00000012603	NCL	88	98.932	ENSRROG00000028756	-	86	98.932	Rhinopithecus_roxellana
ENSPPRG00000012603	NCL	99	85.935	ENSRROG00000036103	-	99	87.702	Rhinopithecus_roxellana
ENSPPRG00000012603	NCL	55	74.429	ENSSBOG00000023094	-	76	74.661	Saimiri_boliviensis_boliviensis
ENSPPRG00000012603	NCL	81	89.294	ENSSBOG00000027549	-	94	89.294	Saimiri_boliviensis_boliviensis
ENSPPRG00000012603	NCL	92	88.754	ENSSBOG00000029193	-	100	89.972	Saimiri_boliviensis_boliviensis
ENSPPRG00000012603	NCL	92	89.910	ENSSSCG00000016275	NCL	92	89.910	Sus_scrofa
ENSPPRG00000012603	NCL	65	82.153	ENSTBEG00000002469	-	66	82.000	Tupaia_belangeri
ENSPPRG00000012603	NCL	55	84.433	ENSTBEG00000001546	-	85	81.803	Tupaia_belangeri
ENSPPRG00000012603	NCL	92	89.618	ENSTTRG00000009094	NCL	91	89.008	Tursiops_truncatus
ENSPPRG00000012603	NCL	75	94.541	ENSUAMG00000005639	NCL	100	96.223	Ursus_americanus
ENSPPRG00000012603	NCL	92	94.198	ENSUMAG00000015789	NCL	92	94.046	Ursus_maritimus
ENSPPRG00000012603	NCL	69	90.845	ENSVPAG00000001796	NCL	69	90.845	Vicugna_pacos
ENSPPRG00000012603	NCL	100	90.769	ENSVVUG00000025564	NCL	100	90.769	Vulpes_vulpes