EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000012867 (Gene tree)
Gene ID: 109249992
Gene Symbol: SETX
Alias: -
Full Name: senataxin
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 67577 bases
Position: chrKV860355.1:786464-854040
Accession: 109249992
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000022330	SEN1_N	PF12726.7	2.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000020831	SETX-201	10682	XM_019420732	ENSPPRP00000022330	2669 (aa)	XP_019276277	UPI0009047BD4

Gene Model

Click here to download ENSPPRG00000012867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000012867's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000012867	SETX	100	77.786	ENSG00000107290	SETX	100	81.560	Homo_sapiens
ENSPPRG00000012867	SETX	70	43.750	ENSAMXG00000014406	-	79	43.750	Astyanax_mexicanus
ENSPPRG00000012867	SETX	100	76.977	ENSCJAG00000018245	SETX	100	77.052	Callithrix_jacchus
ENSPPRG00000012867	SETX	100	71.503	ENSCPOG00000001492	SETX	100	71.874	Cavia_porcellus
ENSPPRG00000012867	SETX	97	74.331	ENSCLAG00000012582	SETX	99	74.073	Chinchilla_lanigera
ENSPPRG00000012867	SETX	74	93.817	ENSETEG00000008111	-	74	93.817	Echinops_telfairi
ENSPPRG00000012867	SETX	91	82.822	ENSECAG00000012019	SETX	99	82.863	Equus_caballus
ENSPPRG00000012867	SETX	79	43.551	ENSELUG00000022536	-	84	42.296	Esox_lucius
ENSPPRG00000012867	SETX	100	97.452	ENSFCAG00000007102	SETX	100	97.452	Felis_catus
ENSPPRG00000012867	SETX	78	72.667	ENSFALG00000001464	SETX	86	72.667	Ficedula_albicollis
ENSPPRG00000012867	SETX	100	76.477	ENSGGOG00000027664	SETX	96	83.354	Gorilla_gorilla
ENSPPRG00000012867	SETX	67	46.330	ENSIPUG00000006685	setx	77	46.330	Ictalurus_punctatus
ENSPPRG00000012867	SETX	83	53.907	ENSLOCG00000004264	SETX	89	54.067	Lepisosteus_oculatus
ENSPPRG00000012867	SETX	99	66.867	ENSMOCG00000000848	Setx	99	67.529	Microtus_ochrogaster
ENSPPRG00000012867	SETX	100	70.769	MGP_PahariEiJ_G0024821	Setx	100	71.101	Mus_pahari
ENSPPRG00000012867	SETX	99	76.745	ENSNLEG00000012839	SETX	100	76.745	Nomascus_leucogenys
ENSPPRG00000012867	SETX	95	72.050	ENSOCUG00000005616	SETX	97	71.857	Oryctolagus_cuniculus
ENSPPRG00000012867	SETX	99	78.393	ENSOGAG00000013387	SETX	99	78.210	Otolemur_garnettii
ENSPPRG00000012867	SETX	100	77.377	ENSPPAG00000004108	SETX	99	79.113	Pan_paniscus
ENSPPRG00000012867	SETX	100	99.326	ENSPTIG00000021101	SETX	100	99.326	Panthera_tigris_altaica
ENSPPRG00000012867	SETX	100	77.192	ENSPTRG00000021495	SETX	99	79.113	Pan_troglodytes
ENSPPRG00000012867	SETX	80	49.418	ENSPKIG00000025162	SETX	80	49.750	Paramormyrops_kingsleyae
ENSPPRG00000012867	SETX	59	93.103	ENSSARG00000002336	-	63	93.103	Sorex_araneus
ENSPPRG00000012867	SETX	88	70.317	ENSSPUG00000016332	SETX	90	70.317	Sphenodon_punctatus
ENSPPRG00000012867	SETX	99	77.340	ENSSSCG00000005724	SETX	99	77.415	Sus_scrofa
ENSPPRG00000012867	SETX	79	72.379	ENSTGUG00000005117	SETX	86	72.379	Taeniopygia_guttata
ENSPPRG00000012867	SETX	79	64.238	ENSXETG00000006254	setx	88	64.238	Xenopus_tropicalis