EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000012873 (Gene tree)
Gene ID: 109245948
Gene Symbol: RBM47
Alias: -
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 10521 bases
Position: chrKV860274.1:48612955-48623475
Accession: 109245948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000022302	RRM_1	PF00076.22	8.8e-38	1	3
ENSPPRP00000022302	RRM_1	PF00076.22	8.8e-38	2	3
ENSPPRP00000022302	RRM_1	PF00076.22	8.8e-38	3	3
ENSPPRP00000022316	RRM_1	PF00076.22	1.4e-37	1	3
ENSPPRP00000022316	RRM_1	PF00076.22	1.4e-37	2	3
ENSPPRP00000022316	RRM_1	PF00076.22	1.4e-37	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000020828	RBM47-202	1716	XM_019413595	ENSPPRP00000022316	571 (aa)	XP_019269140	-
ENSPPRT00000020816	RBM47-201	1509	-	ENSPPRP00000022302	502 (aa)	-	-

Gene Model

Click here to download ENSPPRG00000012873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000012873's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000012873	RBM47	61	55.591	ENSPPRG00000011708	HNRNPR	71	46.272
ENSPPRG00000012873	RBM47	60	74.333	ENSPPRG00000009416	RBM46	64	74.333
ENSPPRG00000012873	RBM47	69	67.816	ENSPPRG00000012180	A1CF	76	58.261
ENSPPRG00000012873	RBM47	59	55.150	ENSPPRG00000011141	SYNCRIP	79	46.067

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000012873	RBM47	100	93.434	ENSG00000163694	RBM47	100	99.115	Homo_sapiens
ENSPPRG00000012873	RBM47	100	83.467	ENSAPOG00000011062	rbm47	100	81.266	Acanthochromis_polyacanthus
ENSPPRG00000012873	RBM47	100	98.933	ENSAMEG00000009672	RBM47	100	93.624	Ailuropoda_melanoleuca
ENSPPRG00000012873	RBM47	100	84.000	ENSACIG00000011531	rbm47	100	81.794	Amphilophus_citrinellus
ENSPPRG00000012873	RBM47	99	83.467	ENSAOCG00000022245	rbm47	100	81.266	Amphiprion_ocellaris
ENSPPRG00000012873	RBM47	99	83.467	ENSAPEG00000018304	rbm47	100	81.266	Amphiprion_percula
ENSPPRG00000012873	RBM47	100	81.234	ENSATEG00000018400	rbm47	94	84.401	Anabas_testudineus
ENSPPRG00000012873	RBM47	99	92.287	ENSAPLG00000013974	RBM47	100	84.992	Anas_platyrhynchos
ENSPPRG00000012873	RBM47	99	86.472	ENSACAG00000011833	RBM47	100	83.139	Anolis_carolinensis
ENSPPRG00000012873	RBM47	100	93.266	ENSANAG00000029440	RBM47	100	93.266	Aotus_nancymaae
ENSPPRG00000012873	RBM47	100	82.171	ENSACLG00000016902	rbm47	95	85.634	Astatotilapia_calliptera
ENSPPRG00000012873	RBM47	100	80.412	ENSAMXG00000021794	rbm47	95	83.333	Astyanax_mexicanus
ENSPPRG00000012873	RBM47	100	94.924	ENSBTAG00000002356	RBM47	100	94.924	Bos_taurus
ENSPPRG00000012873	RBM47	100	92.941	ENSCJAG00000019385	RBM47	100	92.941	Callithrix_jacchus
ENSPPRG00000012873	RBM47	96	91.740	ENSCAFG00000015898	RBM47	100	91.568	Canis_familiaris
ENSPPRG00000012873	RBM47	80	96.884	ENSCAFG00020010558	RBM47	94	91.011	Canis_lupus_dingo
ENSPPRG00000012873	RBM47	100	95.262	ENSCHIG00000026214	RBM47	100	95.262	Capra_hircus
ENSPPRG00000012873	RBM47	85	75.442	ENSTSYG00000033612	RBM47	92	89.381	Carlito_syrichta
ENSPPRG00000012873	RBM47	100	87.162	ENSCAPG00000008426	RBM47	100	87.162	Cavia_aperea
ENSPPRG00000012873	RBM47	100	97.333	ENSCPOG00000014100	RBM47	100	93.750	Cavia_porcellus
ENSPPRG00000012873	RBM47	99	68.293	ENSCCAG00000024397	-	99	66.725	Cebus_capucinus
ENSPPRG00000012873	RBM47	100	92.941	ENSCCAG00000030129	-	100	92.941	Cebus_capucinus
ENSPPRG00000012873	RBM47	100	94.228	ENSCATG00000042064	RBM47	100	94.228	Cercocebus_atys
ENSPPRG00000012873	RBM47	100	96.533	ENSCLAG00000001684	RBM47	100	95.570	Chinchilla_lanigera
ENSPPRG00000012873	RBM47	100	93.603	ENSCSAG00000017060	RBM47	100	93.603	Chlorocebus_sabaeus
ENSPPRG00000012873	RBM47	91	94.937	ENSCHOG00000011731	RBM47	88	94.937	Choloepus_hoffmanni
ENSPPRG00000012873	RBM47	99	92.553	ENSCPBG00000013831	RBM47	100	87.248	Chrysemys_picta_bellii
ENSPPRG00000012873	RBM47	100	94.058	ENSCANG00000019997	RBM47	100	94.058	Colobus_angolensis_palliatus
ENSPPRG00000012873	RBM47	100	85.468	ENSCGRG00001020102	-	100	85.660	Cricetulus_griseus_chok1gshd
ENSPPRG00000012873	RBM47	100	94.415	ENSCGRG00001000623	-	100	89.430	Cricetulus_griseus_chok1gshd
ENSPPRG00000012873	RBM47	100	92.448	ENSCGRG00000007762	-	100	93.671	Cricetulus_griseus_crigri
ENSPPRG00000012873	RBM47	100	85.086	ENSCGRG00000014760	-	100	85.277	Cricetulus_griseus_crigri
ENSPPRG00000012873	RBM47	99	82.228	ENSCSEG00000004545	rbm47	100	79.528	Cynoglossus_semilaevis
ENSPPRG00000012873	RBM47	99	82.400	ENSCVAG00000020144	rbm47	100	73.862	Cyprinodon_variegatus
ENSPPRG00000012873	RBM47	100	75.083	ENSDARG00000061985	rbm47	95	83.196	Danio_rerio
ENSPPRG00000012873	RBM47	100	91.695	ENSDNOG00000046854	RBM47	100	92.542	Dasypus_novemcinctus
ENSPPRG00000012873	RBM47	100	94.459	ENSDORG00000010144	Rbm47	100	91.290	Dipodomys_ordii
ENSPPRG00000012873	RBM47	100	94.180	ENSETEG00000009194	RBM47	100	90.604	Echinops_telfairi
ENSPPRG00000012873	RBM47	99	70.745	ENSEBUG00000011912	rbm47	95	58.772	Eptatretus_burgeri
ENSPPRG00000012873	RBM47	100	95.431	ENSEASG00005008443	RBM47	100	95.431	Equus_asinus_asinus
ENSPPRG00000012873	RBM47	100	95.431	ENSECAG00000004400	RBM47	100	95.431	Equus_caballus
ENSPPRG00000012873	RBM47	74	96.970	ENSEEUG00000001194	RBM47	75	96.970	Erinaceus_europaeus
ENSPPRG00000012873	RBM47	99	83.024	ENSELUG00000006148	rbm47	94	76.389	Esox_lucius
ENSPPRG00000012873	RBM47	100	96.435	ENSFCAG00000012399	RBM47	100	96.435	Felis_catus
ENSPPRG00000012873	RBM47	99	92.021	ENSFALG00000002861	RBM47	100	87.731	Ficedula_albicollis
ENSPPRG00000012873	RBM47	100	94.133	ENSFDAG00000016326	RBM47	100	91.695	Fukomys_damarensis
ENSPPRG00000012873	RBM47	99	83.200	ENSFHEG00000007938	rbm47	100	73.737	Fundulus_heteroclitus
ENSPPRG00000012873	RBM47	99	81.266	ENSGMOG00000014802	rbm47	94	75.347	Gadus_morhua
ENSPPRG00000012873	RBM47	75	92.021	ENSGALG00000014267	RBM47	100	91.777	Gallus_gallus
ENSPPRG00000012873	RBM47	75	83.200	ENSGAFG00000020571	rbm47	98	81.383	Gambusia_affinis
ENSPPRG00000012873	RBM47	100	79.284	ENSGACG00000016223	rbm47	94	83.008	Gasterosteus_aculeatus
ENSPPRG00000012873	RBM47	99	92.553	ENSGAGG00000020051	RBM47	100	87.416	Gopherus_agassizii
ENSPPRG00000012873	RBM47	100	94.228	ENSGGOG00000001367	RBM47	100	94.228	Gorilla_gorilla
ENSPPRG00000012873	RBM47	100	82.171	ENSHBUG00000003520	rbm47	95	85.634	Haplochromis_burtoni
ENSPPRG00000012873	RBM47	100	76.575	ENSHGLG00000016914	RBM47	100	95.570	Heterocephalus_glaber_female
ENSPPRG00000012873	RBM47	100	81.525	ENSHGLG00100003071	-	100	81.525	Heterocephalus_glaber_male
ENSPPRG00000012873	RBM47	100	93.211	ENSHGLG00100014028	-	100	95.570	Heterocephalus_glaber_male
ENSPPRG00000012873	RBM47	99	84.085	ENSHCOG00000002074	rbm47	99	80.052	Hippocampus_comes
ENSPPRG00000012873	RBM47	100	82.133	ENSIPUG00000004743	rbm47	97	83.380	Ictalurus_punctatus
ENSPPRG00000012873	RBM47	100	97.333	ENSSTOG00000004727	RBM47	100	96.203	Ictidomys_tridecemlineatus
ENSPPRG00000012873	RBM47	100	95.491	ENSJJAG00000013823	Rbm47	100	92.282	Jaculus_jaculus
ENSPPRG00000012873	RBM47	99	84.127	ENSKMAG00000000084	rbm47	100	74.832	Kryptolebias_marmoratus
ENSPPRG00000012873	RBM47	99	81.217	ENSLBEG00000008436	rbm47	100	73.199	Labrus_bergylta
ENSPPRG00000012873	RBM47	99	88.533	ENSLACG00000007196	RBM47	100	83.305	Latimeria_chalumnae
ENSPPRG00000012873	RBM47	99	87.200	ENSLOCG00000012966	rbm47	95	79.427	Lepisosteus_oculatus
ENSPPRG00000012873	RBM47	100	96.800	ENSLAFG00000011998	RBM47	100	92.929	Loxodonta_africana
ENSPPRG00000012873	RBM47	100	94.228	ENSMFAG00000037967	RBM47	100	94.228	Macaca_fascicularis
ENSPPRG00000012873	RBM47	100	93.603	ENSMMUG00000012036	RBM47	100	98.964	Macaca_mulatta
ENSPPRG00000012873	RBM47	100	94.228	ENSMNEG00000040774	RBM47	100	94.228	Macaca_nemestrina
ENSPPRG00000012873	RBM47	100	99.048	ENSMLEG00000041432	RBM47	100	99.048	Mandrillus_leucophaeus
ENSPPRG00000012873	RBM47	99	81.701	ENSMAMG00000019143	rbm47	95	84.401	Mastacembelus_armatus
ENSPPRG00000012873	RBM47	100	82.171	ENSMZEG00005023659	rbm47	95	85.634	Maylandia_zebra
ENSPPRG00000012873	RBM47	99	92.287	ENSMGAG00000012226	RBM47	100	86.789	Meleagris_gallopavo
ENSPPRG00000012873	RBM47	100	93.899	ENSMAUG00000006493	Rbm47	100	93.671	Mesocricetus_auratus
ENSPPRG00000012873	RBM47	100	87.436	ENSMICG00000026417	RBM47	100	88.964	Microcebus_murinus
ENSPPRG00000012873	RBM47	100	94.947	ENSMOCG00000021170	Rbm47	100	95.570	Microtus_ochrogaster
ENSPPRG00000012873	RBM47	100	80.670	ENSMMOG00000007260	rbm47	95	81.894	Mola_mola
ENSPPRG00000012873	RBM47	100	92.267	ENSMODG00000007003	RBM47	100	88.682	Monodelphis_domestica
ENSPPRG00000012873	RBM47	62	80.757	ENSMODG00000015426	-	97	79.743	Monodelphis_domestica
ENSPPRG00000012873	RBM47	100	85.333	ENSMODG00000020561	-	97	80.492	Monodelphis_domestica
ENSPPRG00000012873	RBM47	99	82.400	ENSMALG00000005167	rbm47	100	81.530	Monopterus_albus
ENSPPRG00000012873	RBM47	100	93.883	MGP_CAROLIEiJ_G0027258	Rbm47	100	92.405	Mus_caroli
ENSPPRG00000012873	RBM47	100	94.149	ENSMUSG00000070780	Rbm47	100	92.405	Mus_musculus
ENSPPRG00000012873	RBM47	100	94.149	MGP_PahariEiJ_G0017040	Rbm47	100	93.038	Mus_pahari
ENSPPRG00000012873	RBM47	100	94.149	MGP_SPRETEiJ_G0028253	Rbm47	100	92.405	Mus_spretus
ENSPPRG00000012873	RBM47	100	99.200	ENSMPUG00000006177	RBM47	94	94.435	Mustela_putorius_furo
ENSPPRG00000012873	RBM47	100	94.960	ENSMLUG00000000889	RBM47	100	91.201	Myotis_lucifugus
ENSPPRG00000012873	RBM47	100	94.947	ENSNGAG00000003325	Rbm47	100	91.261	Nannospalax_galili
ENSPPRG00000012873	RBM47	100	82.429	ENSNBRG00000015092	rbm47	95	84.958	Neolamprologus_brichardi
ENSPPRG00000012873	RBM47	100	93.888	ENSNLEG00000017151	RBM47	100	93.888	Nomascus_leucogenys
ENSPPRG00000012873	RBM47	71	93.296	ENSMEUG00000009516	-	99	87.264	Notamacropus_eugenii
ENSPPRG00000012873	RBM47	85	96.680	ENSOPRG00000016507	-	72	96.680	Ochotona_princeps
ENSPPRG00000012873	RBM47	100	97.067	ENSODEG00000004873	RBM47	100	93.909	Octodon_degus
ENSPPRG00000012873	RBM47	100	81.538	ENSONIG00000009061	rbm47	94	84.680	Oreochromis_niloticus
ENSPPRG00000012873	RBM47	100	87.629	ENSOANG00000008978	RBM47	100	85.906	Ornithorhynchus_anatinus
ENSPPRG00000012873	RBM47	100	92.893	ENSOCUG00000012034	RBM47	100	92.893	Oryctolagus_cuniculus
ENSPPRG00000012873	RBM47	100	84.309	ENSORLG00000005847	rbm47	100	73.906	Oryzias_latipes
ENSPPRG00000012873	RBM47	100	84.309	ENSORLG00020005154	rbm47	100	74.074	Oryzias_latipes_hni
ENSPPRG00000012873	RBM47	100	84.574	ENSORLG00015000066	rbm47	100	74.454	Oryzias_latipes_hsok
ENSPPRG00000012873	RBM47	100	84.533	ENSOMEG00000010730	rbm47	100	75.294	Oryzias_melastigma
ENSPPRG00000012873	RBM47	100	89.333	ENSOGAG00000025193	-	100	85.908	Otolemur_garnettii
ENSPPRG00000012873	RBM47	100	93.592	ENSOGAG00000029367	-	100	93.592	Otolemur_garnettii
ENSPPRG00000012873	RBM47	100	89.552	ENSOARG00000012711	RBM47	100	86.294	Ovis_aries
ENSPPRG00000012873	RBM47	100	94.058	ENSPPAG00000029763	RBM47	100	94.058	Pan_paniscus
ENSPPRG00000012873	RBM47	84	92.200	ENSPTIG00000017046	RBM47	100	92.000	Panthera_tigris_altaica
ENSPPRG00000012873	RBM47	100	94.228	ENSPTRG00000016006	RBM47	100	94.228	Pan_troglodytes
ENSPPRG00000012873	RBM47	100	94.228	ENSPANG00000005980	RBM47	100	94.228	Papio_anubis
ENSPPRG00000012873	RBM47	100	76.806	ENSPKIG00000013431	RBM47	100	74.697	Paramormyrops_kingsleyae
ENSPPRG00000012873	RBM47	96	84.722	ENSPKIG00000005037	rbm47	95	83.889	Paramormyrops_kingsleyae
ENSPPRG00000012873	RBM47	87	92.287	ENSPSIG00000017516	RBM47	97	87.311	Pelodiscus_sinensis
ENSPPRG00000012873	RBM47	100	83.467	ENSPMGG00000018540	rbm47	100	81.003	Periophthalmus_magnuspinnatus
ENSPPRG00000012873	RBM47	100	94.947	ENSPEMG00000011088	Rbm47	100	91.261	Peromyscus_maniculatus_bairdii
ENSPPRG00000012873	RBM47	100	79.699	ENSPFOG00000007997	rbm47	94	81.720	Poecilia_formosa
ENSPPRG00000012873	RBM47	100	79.449	ENSPLAG00000002072	rbm47	94	81.452	Poecilia_latipinna
ENSPPRG00000012873	RBM47	99	83.467	ENSPMEG00000017492	rbm47	100	81.867	Poecilia_mexicana
ENSPPRG00000012873	RBM47	96	86.723	ENSPREG00000008456	rbm47	94	81.720	Poecilia_reticulata
ENSPPRG00000012873	RBM47	98	84.239	ENSPPYG00000014688	RBM47	98	78.351	Pongo_abelii
ENSPPRG00000012873	RBM47	92	95.822	ENSPCAG00000011879	RBM47	81	96.750	Procavia_capensis
ENSPPRG00000012873	RBM47	100	90.832	ENSPCOG00000023451	RBM47	100	91.681	Propithecus_coquereli
ENSPPRG00000012873	RBM47	100	93.434	ENSPVAG00000003812	RBM47	100	93.434	Pteropus_vampyrus
ENSPPRG00000012873	RBM47	100	82.171	ENSPNYG00000022868	rbm47	95	84.680	Pundamilia_nyererei
ENSPPRG00000012873	RBM47	99	80.928	ENSPNAG00000007940	rbm47	95	83.889	Pygocentrus_nattereri
ENSPPRG00000012873	RBM47	100	94.415	ENSRNOG00000002408	Rbm47	100	90.894	Rattus_norvegicus
ENSPPRG00000012873	RBM47	100	94.058	ENSRBIG00000039601	RBM47	100	94.058	Rhinopithecus_bieti
ENSPPRG00000012873	RBM47	100	94.058	ENSRROG00000044696	RBM47	100	94.058	Rhinopithecus_roxellana
ENSPPRG00000012873	RBM47	100	89.813	ENSSBOG00000028475	RBM47	96	97.333	Saimiri_boliviensis_boliviensis
ENSPPRG00000012873	RBM47	100	92.533	ENSSHAG00000017576	RBM47	100	90.000	Sarcophilus_harrisii
ENSPPRG00000012873	RBM47	100	73.445	ENSSFOG00015024101	RBM47	97	74.783	Scleropages_formosus
ENSPPRG00000012873	RBM47	99	81.074	ENSSFOG00015012445	rbm47	94	84.789	Scleropages_formosus
ENSPPRG00000012873	RBM47	100	79.949	ENSSMAG00000009744	rbm47	94	82.451	Scophthalmus_maximus
ENSPPRG00000012873	RBM47	99	83.733	ENSSDUG00000022684	rbm47	100	81.530	Seriola_dumerili
ENSPPRG00000012873	RBM47	99	84.000	ENSSLDG00000003109	rbm47	100	81.266	Seriola_lalandi_dorsalis
ENSPPRG00000012873	RBM47	88	95.982	ENSSARG00000001735	RBM47	84	95.982	Sorex_araneus
ENSPPRG00000012873	RBM47	99	89.867	ENSSPUG00000007515	RBM47	100	83.980	Sphenodon_punctatus
ENSPPRG00000012873	RBM47	100	84.533	ENSSPAG00000001257	rbm47	100	82.058	Stegastes_partitus
ENSPPRG00000012873	RBM47	100	94.755	ENSSSCG00000008796	RBM47	100	94.755	Sus_scrofa
ENSPPRG00000012873	RBM47	99	92.021	ENSTGUG00000008705	RBM47	100	87.374	Taeniopygia_guttata
ENSPPRG00000012873	RBM47	100	83.467	ENSTRUG00000014050	rbm47	100	80.267	Takifugu_rubripes
ENSPPRG00000012873	RBM47	100	81.443	ENSTNIG00000006127	rbm47	95	82.451	Tetraodon_nigroviridis
ENSPPRG00000012873	RBM47	90	92.405	ENSTBEG00000001607	RBM47	76	92.405	Tupaia_belangeri
ENSPPRG00000012873	RBM47	100	94.237	ENSTTRG00000002839	RBM47	100	94.237	Tursiops_truncatus
ENSPPRG00000012873	RBM47	100	94.266	ENSUAMG00000021346	RBM47	100	94.266	Ursus_americanus
ENSPPRG00000012873	RBM47	55	100.000	ENSVPAG00000000641	-	57	100.000	Vicugna_pacos
ENSPPRG00000012873	RBM47	96	92.254	ENSVVUG00000014774	RBM47	100	91.723	Vulpes_vulpes
ENSPPRG00000012873	RBM47	99	87.831	ENSXETG00000012802	rbm47	100	82.968	Xenopus_tropicalis
ENSPPRG00000012873	RBM47	100	75.048	ENSXCOG00000000780	rbm47	100	72.952	Xiphophorus_couchianus
ENSPPRG00000012873	RBM47	100	82.933	ENSXMAG00000009874	rbm47	100	81.333	Xiphophorus_maculatus