EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000013561 (Gene tree)
Gene ID: 109248975
Gene Symbol: TARBP1
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 90732 bases
Position: chrKV860348.1:5340502-5431233
Accession: 109248975
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000023278	SpoU_methylase	PF00588.19	3.5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000021844	TARBP1-201	4506	XM_019419085	ENSPPRP00000023278	1501 (aa)	XP_019274630	-

Gene Model

Click here to download ENSPPRG00000013561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000013561's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000013561	TARBP1	99	75.535	ENSG00000059588	TARBP1	95	88.889	Homo_sapiens
ENSPPRG00000013561	TARBP1	86	46.020	ENSAPOG00000016419	si:dkey-85a20.4	80	46.020	Acanthochromis_polyacanthus
ENSPPRG00000013561	TARBP1	88	86.194	ENSAMEG00000003359	TARBP1	100	86.267	Ailuropoda_melanoleuca
ENSPPRG00000013561	TARBP1	88	42.898	ENSATEG00000020266	si:dkey-85a20.4	83	43.615	Anabas_testudineus
ENSPPRG00000013561	TARBP1	87	65.160	ENSAPLG00000007666	TARBP1	99	65.954	Anas_platyrhynchos
ENSPPRG00000013561	TARBP1	99	55.037	ENSACAG00000001142	TARBP1	99	54.517	Anolis_carolinensis
ENSPPRG00000013561	TARBP1	97	84.270	ENSANAG00000022031	TARBP1	99	74.734	Aotus_nancymaae
ENSPPRG00000013561	TARBP1	92	85.490	ENSBTAG00000004517	TARBP1	95	87.425	Bos_taurus
ENSPPRG00000013561	TARBP1	99	74.908	ENSCJAG00000018155	TARBP1	95	85.119	Callithrix_jacchus
ENSPPRG00000013561	TARBP1	92	84.702	ENSCAFG00000011533	TARBP1	98	86.551	Canis_familiaris
ENSPPRG00000013561	TARBP1	100	87.037	ENSCAFG00020027141	TARBP1	100	79.741	Canis_lupus_dingo
ENSPPRG00000013561	TARBP1	99	85.030	ENSCHIG00000011437	TARBP1	95	88.024	Capra_hircus
ENSPPRG00000013561	TARBP1	85	81.292	ENSTSYG00000010382	TARBP1	99	81.443	Carlito_syrichta
ENSPPRG00000013561	TARBP1	82	67.410	ENSCAPG00000010831	TARBP1	99	67.195	Cavia_aperea
ENSPPRG00000013561	TARBP1	99	72.072	ENSCPOG00000013995	TARBP1	95	73.650	Cavia_porcellus
ENSPPRG00000013561	TARBP1	99	85.802	ENSCCAG00000037278	TARBP1	95	84.524	Cebus_capucinus
ENSPPRG00000013561	TARBP1	99	73.761	ENSCATG00000011754	TARBP1	95	88.690	Cercocebus_atys
ENSPPRG00000013561	TARBP1	87	91.667	ENSCLAG00000003655	TARBP1	99	91.667	Chinchilla_lanigera
ENSPPRG00000013561	TARBP1	83	81.289	ENSCSAG00000010100	TARBP1	99	81.444	Chlorocebus_sabaeus
ENSPPRG00000013561	TARBP1	92	70.357	ENSCPBG00000005587	TARBP1	94	69.773	Chrysemys_picta_bellii
ENSPPRG00000013561	TARBP1	88	81.905	ENSCANG00000034343	TARBP1	99	82.051	Colobus_angolensis_palliatus
ENSPPRG00000013561	TARBP1	99	69.562	ENSCGRG00001016690	Tarbp1	99	69.625	Cricetulus_griseus_chok1gshd
ENSPPRG00000013561	TARBP1	99	68.527	ENSCGRG00000016893	Tarbp1	95	73.060	Cricetulus_griseus_crigri
ENSPPRG00000013561	TARBP1	86	43.184	ENSCSEG00000005255	si:dkey-85a20.4	85	40.909	Cynoglossus_semilaevis
ENSPPRG00000013561	TARBP1	87	45.029	ENSDARG00000079055	si:dkey-85a20.4	99	53.195	Danio_rerio
ENSPPRG00000013561	TARBP1	98	84.918	ENSDNOG00000008637	TARBP1	95	82.217	Dasypus_novemcinctus
ENSPPRG00000013561	TARBP1	83	70.393	ENSDORG00000007984	Tarbp1	100	70.393	Dipodomys_ordii
ENSPPRG00000013561	TARBP1	100	82.601	ENSEASG00005000252	TARBP1	95	87.148	Equus_asinus_asinus
ENSPPRG00000013561	TARBP1	100	82.438	ENSECAG00000023673	TARBP1	95	88.272	Equus_caballus
ENSPPRG00000013561	TARBP1	87	42.383	ENSELUG00000012193	si:dkey-85a20.4	85	42.383	Esox_lucius
ENSPPRG00000013561	TARBP1	100	99.383	ENSFCAG00000014183	TARBP1	100	84.369	Felis_catus
ENSPPRG00000013561	TARBP1	84	64.132	ENSFALG00000013565	TARBP1	99	64.297	Ficedula_albicollis
ENSPPRG00000013561	TARBP1	83	71.854	ENSFDAG00000001308	TARBP1	99	71.787	Fukomys_damarensis
ENSPPRG00000013561	TARBP1	88	38.612	ENSFHEG00000007565	si:dkey-85a20.4	71	52.958	Fundulus_heteroclitus
ENSPPRG00000013561	TARBP1	87	41.467	ENSGMOG00000004549	si:dkey-85a20.4	98	41.540	Gadus_morhua
ENSPPRG00000013561	TARBP1	92	61.334	ENSGALG00000011000	TARBP1	99	57.416	Gallus_gallus
ENSPPRG00000013561	TARBP1	87	45.375	ENSGAFG00000007387	si:dkey-85a20.4	80	45.267	Gambusia_affinis
ENSPPRG00000013561	TARBP1	88	43.601	ENSGACG00000005865	si:dkey-85a20.4	97	43.350	Gasterosteus_aculeatus
ENSPPRG00000013561	TARBP1	98	71.429	ENSGAGG00000012102	TARBP1	99	64.317	Gopherus_agassizii
ENSPPRG00000013561	TARBP1	88	79.884	ENSGGOG00000022879	TARBP1	99	79.884	Gorilla_gorilla
ENSPPRG00000013561	TARBP1	86	48.214	ENSHBUG00000008877	si:dkey-85a20.4	83	44.396	Haplochromis_burtoni
ENSPPRG00000013561	TARBP1	99	69.562	ENSHGLG00000011592	TARBP1	95	79.630	Heterocephalus_glaber_female
ENSPPRG00000013561	TARBP1	99	73.688	ENSHGLG00100015169	TARBP1	99	75.054	Heterocephalus_glaber_male
ENSPPRG00000013561	TARBP1	86	42.847	ENSIPUG00000005249	si:dkey-85a20.4	81	43.142	Ictalurus_punctatus
ENSPPRG00000013561	TARBP1	91	72.881	ENSSTOG00000032291	TARBP1	99	82.222	Ictidomys_tridecemlineatus
ENSPPRG00000013561	TARBP1	99	66.781	ENSJJAG00000017840	Tarbp1	99	68.596	Jaculus_jaculus
ENSPPRG00000013561	TARBP1	69	46.051	ENSKMAG00000017546	si:dkey-85a20.4	68	46.452	Kryptolebias_marmoratus
ENSPPRG00000013561	TARBP1	71	48.765	ENSLBEG00000012132	si:dkey-85a20.4	75	48.895	Labrus_bergylta
ENSPPRG00000013561	TARBP1	99	48.507	ENSLACG00000004337	TARBP1	84	53.667	Latimeria_chalumnae
ENSPPRG00000013561	TARBP1	88	49.015	ENSLOCG00000016214	si:dkey-85a20.4	84	49.088	Lepisosteus_oculatus
ENSPPRG00000013561	TARBP1	96	81.463	ENSLAFG00000011394	TARBP1	99	77.800	Loxodonta_africana
ENSPPRG00000013561	TARBP1	99	72.637	ENSMFAG00000041068	TARBP1	99	74.658	Macaca_fascicularis
ENSPPRG00000013561	TARBP1	99	70.556	ENSMMUG00000021703	TARBP1	99	89.286	Macaca_mulatta
ENSPPRG00000013561	TARBP1	99	73.150	ENSMNEG00000045002	TARBP1	99	89.286	Macaca_nemestrina
ENSPPRG00000013561	TARBP1	87	82.301	ENSMLEG00000044182	TARBP1	99	82.388	Mandrillus_leucophaeus
ENSPPRG00000013561	TARBP1	88	44.210	ENSMAMG00000021760	si:dkey-85a20.4	84	44.210	Mastacembelus_armatus
ENSPPRG00000013561	TARBP1	86	48.214	ENSMZEG00005005751	si:dkey-85a20.4	83	45.119	Maylandia_zebra
ENSPPRG00000013561	TARBP1	99	69.082	ENSMAUG00000020968	Tarbp1	99	68.645	Mesocricetus_auratus
ENSPPRG00000013561	TARBP1	99	69.144	ENSMICG00000015280	TARBP1	94	75.758	Microcebus_murinus
ENSPPRG00000013561	TARBP1	99	66.894	ENSMOCG00000004128	Tarbp1	99	66.895	Microtus_ochrogaster
ENSPPRG00000013561	TARBP1	84	44.333	ENSMMOG00000007795	si:dkey-85a20.4	78	44.333	Mola_mola
ENSPPRG00000013561	TARBP1	98	77.751	ENSMODG00000008504	TARBP1	95	72.708	Monodelphis_domestica
ENSPPRG00000013561	TARBP1	87	43.745	ENSMALG00000002916	si:dkey-85a20.4	84	43.599	Monopterus_albus
ENSPPRG00000013561	TARBP1	99	68.543	MGP_CAROLIEiJ_G0031729	Tarbp1	99	68.105	Mus_caroli
ENSPPRG00000013561	TARBP1	99	68.293	ENSMUSG00000090290	Tarbp1	99	68.293	Mus_musculus
ENSPPRG00000013561	TARBP1	100	68.221	MGP_PahariEiJ_G0023326	Tarbp1	100	68.221	Mus_pahari
ENSPPRG00000013561	TARBP1	100	68.057	MGP_SPRETEiJ_G0032846	Tarbp1	100	68.057	Mus_spretus
ENSPPRG00000013561	TARBP1	80	83.521	ENSMPUG00000002802	TARBP1	100	83.226	Mustela_putorius_furo
ENSPPRG00000013561	TARBP1	88	74.800	ENSMLUG00000002414	TARBP1	100	74.800	Myotis_lucifugus
ENSPPRG00000013561	TARBP1	99	88.272	ENSNLEG00000002518	TARBP1	95	86.310	Nomascus_leucogenys
ENSPPRG00000013561	TARBP1	65	77.119	ENSMEUG00000011370	-	62	77.119	Notamacropus_eugenii
ENSPPRG00000013561	TARBP1	77	85.738	ENSOPRG00000013822	TARBP1	69	85.738	Ochotona_princeps
ENSPPRG00000013561	TARBP1	99	70.721	ENSODEG00000005238	TARBP1	99	70.978	Octodon_degus
ENSPPRG00000013561	TARBP1	88	44.935	ENSONIG00000009789	si:dkey-85a20.4	97	44.109	Oreochromis_niloticus
ENSPPRG00000013561	TARBP1	99	73.444	ENSOCUG00000017418	TARBP1	99	75.200	Oryctolagus_cuniculus
ENSPPRG00000013561	TARBP1	96	44.505	ENSORLG00000010529	si:dkey-85a20.4	84	42.682	Oryzias_latipes
ENSPPRG00000013561	TARBP1	96	43.384	ENSORLG00020019264	si:dkey-85a20.4	83	42.041	Oryzias_latipes_hni
ENSPPRG00000013561	TARBP1	96	43.961	ENSORLG00015003276	si:dkey-85a20.4	84	42.249	Oryzias_latipes_hsok
ENSPPRG00000013561	TARBP1	99	73.642	ENSOGAG00000002379	TARBP1	95	88.889	Otolemur_garnettii
ENSPPRG00000013561	TARBP1	100	76.098	ENSOARG00000003434	TARBP1	100	77.835	Ovis_aries
ENSPPRG00000013561	TARBP1	88	82.602	ENSPPAG00000028097	TARBP1	99	82.749	Pan_paniscus
ENSPPRG00000013561	TARBP1	87	94.415	ENSPTIG00000009281	TARBP1	100	93.978	Panthera_tigris_altaica
ENSPPRG00000013561	TARBP1	99	75.107	ENSPTRG00000002124	TARBP1	95	86.905	Pan_troglodytes
ENSPPRG00000013561	TARBP1	99	73.366	ENSPANG00000021933	TARBP1	99	88.095	Papio_anubis
ENSPPRG00000013561	TARBP1	86	47.949	ENSPKIG00000016716	si:dkey-85a20.4	79	47.949	Paramormyrops_kingsleyae
ENSPPRG00000013561	TARBP1	83	61.658	ENSPSIG00000010699	TARBP1	99	66.563	Pelodiscus_sinensis
ENSPPRG00000013561	TARBP1	100	69.425	ENSPEMG00000006888	Tarbp1	100	69.360	Peromyscus_maniculatus_bairdii
ENSPPRG00000013561	TARBP1	91	83.010	ENSPCIG00000029710	TARBP1	99	83.010	Phascolarctos_cinereus
ENSPPRG00000013561	TARBP1	88	45.151	ENSPFOG00000013020	si:dkey-85a20.4	94	45.259	Poecilia_formosa
ENSPPRG00000013561	TARBP1	88	45.563	ENSPLAG00000006044	si:dkey-85a20.4	81	45.671	Poecilia_latipinna
ENSPPRG00000013561	TARBP1	88	45.455	ENSPMEG00000017857	si:dkey-85a20.4	81	45.563	Poecilia_mexicana
ENSPPRG00000013561	TARBP1	86	46.096	ENSPREG00000022753	si:dkey-85a20.4	80	46.170	Poecilia_reticulata
ENSPPRG00000013561	TARBP1	91	87.037	ENSPPYG00000000102	TARBP1	95	90.625	Pongo_abelii
ENSPPRG00000013561	TARBP1	84	87.662	ENSPCAG00000004808	TARBP1	71	87.662	Procavia_capensis
ENSPPRG00000013561	TARBP1	99	72.811	ENSPCOG00000005666	TARBP1	95	86.420	Propithecus_coquereli
ENSPPRG00000013561	TARBP1	88	72.374	ENSPVAG00000014798	TARBP1	79	72.374	Pteropus_vampyrus
ENSPPRG00000013561	TARBP1	88	44.593	ENSPNYG00000019135	si:dkey-85a20.4	83	44.519	Pundamilia_nyererei
ENSPPRG00000013561	TARBP1	99	64.478	ENSRNOG00000053574	Tarbp1	99	64.415	Rattus_norvegicus
ENSPPRG00000013561	TARBP1	99	71.206	ENSRBIG00000043362	TARBP1	99	72.310	Rhinopithecus_bieti
ENSPPRG00000013561	TARBP1	99	78.499	ENSRROG00000029527	TARBP1	99	78.991	Rhinopithecus_roxellana
ENSPPRG00000013561	TARBP1	92	81.905	ENSSBOG00000034503	TARBP1	99	91.489	Saimiri_boliviensis_boliviensis
ENSPPRG00000013561	TARBP1	87	71.649	ENSSHAG00000000013	TARBP1	100	71.891	Sarcophilus_harrisii
ENSPPRG00000013561	TARBP1	99	40.966	ENSSFOG00015002660	si:dkey-85a20.4	91	46.667	Scleropages_formosus
ENSPPRG00000013561	TARBP1	88	44.284	ENSSMAG00000007081	si:dkey-85a20.4	82	44.676	Scophthalmus_maximus
ENSPPRG00000013561	TARBP1	88	42.319	ENSSDUG00000023566	si:dkey-85a20.4	84	42.826	Seriola_dumerili
ENSPPRG00000013561	TARBP1	88	44.629	ENSSLDG00000020200	si:dkey-85a20.4	84	44.942	Seriola_lalandi_dorsalis
ENSPPRG00000013561	TARBP1	90	85.253	ENSSARG00000012207	TARBP1	86	85.253	Sorex_araneus
ENSPPRG00000013561	TARBP1	99	63.198	ENSSPUG00000015364	TARBP1	99	63.178	Sphenodon_punctatus
ENSPPRG00000013561	TARBP1	88	44.260	ENSSPAG00000007213	si:dkey-85a20.4	85	43.980	Stegastes_partitus
ENSPPRG00000013561	TARBP1	100	76.695	ENSSSCG00000010160	TARBP1	100	84.940	Sus_scrofa
ENSPPRG00000013561	TARBP1	84	61.086	ENSTGUG00000010214	TARBP1	100	62.453	Taeniopygia_guttata
ENSPPRG00000013561	TARBP1	88	43.055	ENSTNIG00000016586	si:dkey-85a20.4	99	42.538	Tetraodon_nigroviridis
ENSPPRG00000013561	TARBP1	95	86.145	ENSTTRG00000008707	TARBP1	95	86.145	Tursiops_truncatus
ENSPPRG00000013561	TARBP1	86	85.854	ENSUMAG00000006730	TARBP1	99	85.929	Ursus_maritimus
ENSPPRG00000013561	TARBP1	82	90.722	ENSVPAG00000007665	TARBP1	81	90.722	Vicugna_pacos
ENSPPRG00000013561	TARBP1	91	85.582	ENSVVUG00000007460	TARBP1	98	86.311	Vulpes_vulpes
ENSPPRG00000013561	TARBP1	88	53.869	ENSXETG00000016224	tarbp1	99	53.571	Xenopus_tropicalis
ENSPPRG00000013561	TARBP1	80	47.885	ENSXCOG00000011779	si:dkey-85a20.4	91	47.885	Xiphophorus_couchianus
ENSPPRG00000013561	TARBP1	65	47.692	ENSXMAG00000009600	si:dkey-85a20.4	94	47.692	Xiphophorus_maculatus