EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000013566 (Gene tree)
Gene ID: 109246683
Gene Symbol: SF1
Alias: -
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 14029 bases
Position: chrKV860336.1:6527766-6541794
Accession: 109246683
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000023125	KH_1	PF00013.29	2.8e-07	1	1
ENSPPRP00000023148	KH_1	PF00013.29	2.9e-07	1	1
ENSPPRP00000023156	KH_1	PF00013.29	3.2e-07	1	1
ENSPPRP00000023125	zf-CCHC	PF00098.23	0.00018	1	1
ENSPPRP00000023148	zf-CCHC	PF00098.23	0.00019	1	1
ENSPPRP00000023156	zf-CCHC	PF00098.23	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000021695	SF1-203	2900	XM_019414890	ENSPPRP00000023156	673 (aa)	XP_019270435	-
ENSPPRT00000021674	SF1-201	2054	XM_019414883	ENSPPRP00000023125	613 (aa)	XP_019270428	UPI00005A3749
ENSPPRT00000021687	SF1-202	1917	XM_019414888	ENSPPRP00000023148	638 (aa)	XP_019270433	-

Gene Model

Click here to download ENSPPRG00000013566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000013566's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000013566	SF1	57	83.102	ENSAPOG00000012341	sf1	59	76.722	Acanthochromis_polyacanthus
ENSPPRG00000013566	SF1	98	91.719	ENSAMEG00000017828	SF1	88	94.571	Ailuropoda_melanoleuca
ENSPPRG00000013566	SF1	57	84.746	ENSACIG00000016514	sf1	61	78.780	Amphilophus_citrinellus
ENSPPRG00000013566	SF1	57	82.825	ENSAOCG00000010934	sf1	59	76.794	Amphiprion_ocellaris
ENSPPRG00000013566	SF1	57	82.825	ENSAPEG00000009498	sf1	59	76.794	Amphiprion_percula
ENSPPRG00000013566	SF1	57	84.211	ENSATEG00000001894	sf1	59	77.724	Anabas_testudineus
ENSPPRG00000013566	SF1	97	87.270	ENSANAG00000022607	-	99	86.622	Aotus_nancymaae
ENSPPRG00000013566	SF1	100	99.837	ENSANAG00000026664	-	98	99.841	Aotus_nancymaae
ENSPPRG00000013566	SF1	58	85.393	ENSACLG00000007633	sf1	61	79.319	Astatotilapia_calliptera
ENSPPRG00000013566	SF1	58	86.981	ENSAMXG00000003630	sf1	50	79.218	Astyanax_mexicanus
ENSPPRG00000013566	SF1	100	100.000	ENSBTAG00000001035	SF1	96	100.000	Bos_taurus
ENSPPRG00000013566	SF1	100	100.000	ENSCJAG00000002780	SF1	98	100.000	Callithrix_jacchus
ENSPPRG00000013566	SF1	98	100.000	ENSCAFG00000014239	SF1	98	100.000	Canis_familiaris
ENSPPRG00000013566	SF1	100	100.000	ENSCAFG00020014381	SF1	98	100.000	Canis_lupus_dingo
ENSPPRG00000013566	SF1	100	100.000	ENSCHIG00000025867	SF1	98	100.000	Capra_hircus
ENSPPRG00000013566	SF1	98	78.889	ENSCAPG00000010762	SF1	100	78.889	Cavia_aperea
ENSPPRG00000013566	SF1	98	99.522	ENSCPOG00000012290	SF1	100	99.628	Cavia_porcellus
ENSPPRG00000013566	SF1	100	79.935	ENSCCAG00000023781	-	92	85.045	Cebus_capucinus
ENSPPRG00000013566	SF1	98	100.000	ENSCCAG00000037881	SF1	98	100.000	Cebus_capucinus
ENSPPRG00000013566	SF1	100	100.000	ENSCATG00000011564	SF1	98	100.000	Cercocebus_atys
ENSPPRG00000013566	SF1	82	99.602	ENSCSAG00000007258	SF1	98	100.000	Chlorocebus_sabaeus
ENSPPRG00000013566	SF1	68	93.780	ENSCHOG00000006008	SF1	79	93.780	Choloepus_hoffmanni
ENSPPRG00000013566	SF1	82	86.454	ENSCPBG00000023763	SF1	74	77.241	Chrysemys_picta_bellii
ENSPPRG00000013566	SF1	59	58.696	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSPPRG00000013566	SF1	90	47.746	ENSCSAVG00000009055	-	56	66.667	Ciona_savignyi
ENSPPRG00000013566	SF1	100	100.000	ENSCANG00000042201	SF1	98	100.000	Colobus_angolensis_palliatus
ENSPPRG00000013566	SF1	100	99.511	ENSCGRG00001003677	Sf1	96	99.511	Cricetulus_griseus_chok1gshd
ENSPPRG00000013566	SF1	83	97.843	ENSCGRG00000001708	Sf1	99	99.255	Cricetulus_griseus_crigri
ENSPPRG00000013566	SF1	62	79.639	ENSCSEG00000014375	sf1	57	76.513	Cynoglossus_semilaevis
ENSPPRG00000013566	SF1	57	86.080	ENSCVAG00000001670	sf1	63	79.361	Cyprinodon_variegatus
ENSPPRG00000013566	SF1	77	81.649	ENSDARG00000008188	sf1	70	78.230	Danio_rerio
ENSPPRG00000013566	SF1	82	99.205	ENSDNOG00000001282	SF1	98	99.442	Dasypus_novemcinctus
ENSPPRG00000013566	SF1	100	100.000	ENSDORG00000016334	Sf1	98	99.841	Dipodomys_ordii
ENSPPRG00000013566	SF1	93	92.456	ENSETEG00000012830	SF1	82	91.453	Echinops_telfairi
ENSPPRG00000013566	SF1	82	99.205	ENSEASG00005018272	SF1	98	99.628	Equus_asinus_asinus
ENSPPRG00000013566	SF1	82	99.404	ENSECAG00000024544	SF1	98	99.814	Equus_caballus
ENSPPRG00000013566	SF1	64	99.237	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSPPRG00000013566	SF1	57	82.451	ENSELUG00000013225	sf1	54	78.230	Esox_lucius
ENSPPRG00000013566	SF1	98	100.000	ENSFCAG00000012231	SF1	98	100.000	Felis_catus
ENSPPRG00000013566	SF1	98	91.250	ENSFDAG00000009833	SF1	99	92.006	Fukomys_damarensis
ENSPPRG00000013566	SF1	58	83.425	ENSFHEG00000022656	sf1	59	77.251	Fundulus_heteroclitus
ENSPPRG00000013566	SF1	50	88.308	ENSGMOG00000007469	sf1	59	88.308	Gadus_morhua
ENSPPRG00000013566	SF1	57	85.754	ENSGAFG00000019284	sf1	76	80.392	Gambusia_affinis
ENSPPRG00000013566	SF1	56	80.260	ENSGACG00000000826	sf1	66	76.156	Gasterosteus_aculeatus
ENSPPRG00000013566	SF1	72	89.066	ENSGAGG00000021691	SF1	72	85.300	Gopherus_agassizii
ENSPPRG00000013566	SF1	58	83.978	ENSHBUG00000011598	sf1	59	78.657	Haplochromis_burtoni
ENSPPRG00000013566	SF1	98	99.841	ENSHGLG00000009541	SF1	98	99.841	Heterocephalus_glaber_female
ENSPPRG00000013566	SF1	71	89.195	ENSHGLG00100008076	-	87	87.037	Heterocephalus_glaber_male
ENSPPRG00000013566	SF1	69	89.977	ENSHGLG00100008255	-	90	89.522	Heterocephalus_glaber_male
ENSPPRG00000013566	SF1	95	85.406	ENSHGLG00100013879	-	92	97.154	Heterocephalus_glaber_male
ENSPPRG00000013566	SF1	59	81.452	ENSHCOG00000011388	sf1	58	76.755	Hippocampus_comes
ENSPPRG00000013566	SF1	100	100.000	ENSSTOG00000009790	-	100	99.681	Ictidomys_tridecemlineatus
ENSPPRG00000013566	SF1	73	96.667	ENSSTOG00000024353	-	83	96.667	Ictidomys_tridecemlineatus
ENSPPRG00000013566	SF1	100	99.837	ENSJJAG00000011788	Sf1	98	99.681	Jaculus_jaculus
ENSPPRG00000013566	SF1	58	84.384	ENSKMAG00000005854	sf1	62	78.230	Kryptolebias_marmoratus
ENSPPRG00000013566	SF1	75	82.967	ENSLBEG00000019836	sf1	50	86.890	Labrus_bergylta
ENSPPRG00000013566	SF1	64	79.950	ENSLACG00000018493	SF1	74	78.502	Latimeria_chalumnae
ENSPPRG00000013566	SF1	57	86.275	ENSLOCG00000002130	sf1	66	74.222	Lepisosteus_oculatus
ENSPPRG00000013566	SF1	98	95.639	ENSLAFG00000007201	SF1	99	95.639	Loxodonta_africana
ENSPPRG00000013566	SF1	100	100.000	ENSMFAG00000033122	SF1	98	100.000	Macaca_fascicularis
ENSPPRG00000013566	SF1	100	100.000	ENSMMUG00000022606	SF1	99	99.507	Macaca_mulatta
ENSPPRG00000013566	SF1	100	100.000	ENSMNEG00000037901	SF1	96	100.000	Macaca_nemestrina
ENSPPRG00000013566	SF1	100	100.000	ENSMLEG00000040706	SF1	95	100.000	Mandrillus_leucophaeus
ENSPPRG00000013566	SF1	57	83.934	ENSMAMG00000001780	sf1	58	77.966	Mastacembelus_armatus
ENSPPRG00000013566	SF1	58	83.702	ENSMZEG00005009196	sf1	59	78.417	Maylandia_zebra
ENSPPRG00000013566	SF1	98	99.203	ENSMAUG00000014064	Sf1	98	99.203	Mesocricetus_auratus
ENSPPRG00000013566	SF1	100	99.837	ENSMICG00000001202	SF1	98	99.681	Microcebus_murinus
ENSPPRG00000013566	SF1	98	99.203	ENSMOCG00000022038	Sf1	98	99.203	Microtus_ochrogaster
ENSPPRG00000013566	SF1	57	83.051	ENSMMOG00000020474	sf1	60	76.399	Mola_mola
ENSPPRG00000013566	SF1	70	94.419	ENSMODG00000029407	SF1	96	94.395	Monodelphis_domestica
ENSPPRG00000013566	SF1	57	84.659	ENSMALG00000020521	sf1	68	76.611	Monopterus_albus
ENSPPRG00000013566	SF1	100	99.347	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSPPRG00000013566	SF1	100	99.347	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSPPRG00000013566	SF1	100	99.347	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSPPRG00000013566	SF1	100	99.347	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSPPRG00000013566	SF1	100	99.837	ENSMPUG00000012684	SF1	96	99.837	Mustela_putorius_furo
ENSPPRG00000013566	SF1	89	84.644	ENSMLUG00000029800	-	76	94.820	Myotis_lucifugus
ENSPPRG00000013566	SF1	100	99.674	ENSMLUG00000015217	-	96	99.674	Myotis_lucifugus
ENSPPRG00000013566	SF1	98	99.681	ENSNGAG00000005550	Sf1	98	99.681	Nannospalax_galili
ENSPPRG00000013566	SF1	58	85.393	ENSNBRG00000017606	sf1	60	79.319	Neolamprologus_brichardi
ENSPPRG00000013566	SF1	100	99.837	ENSNLEG00000005236	-	98	99.841	Nomascus_leucogenys
ENSPPRG00000013566	SF1	82	98.413	ENSMEUG00000013424	SF1	100	98.493	Notamacropus_eugenii
ENSPPRG00000013566	SF1	77	99.158	ENSOPRG00000005008	SF1	100	99.394	Ochotona_princeps
ENSPPRG00000013566	SF1	98	87.969	ENSODEG00000006102	-	98	87.618	Octodon_degus
ENSPPRG00000013566	SF1	58	83.978	ENSONIG00000015728	sf1	59	78.657	Oreochromis_niloticus
ENSPPRG00000013566	SF1	66	85.961	ENSOANG00000002909	SF1	96	87.724	Ornithorhynchus_anatinus
ENSPPRG00000013566	SF1	98	99.841	ENSOCUG00000026486	SF1	99	99.841	Oryctolagus_cuniculus
ENSPPRG00000013566	SF1	60	81.551	ENSORLG00000011853	sf1	58	76.755	Oryzias_latipes
ENSPPRG00000013566	SF1	60	81.551	ENSORLG00020011834	sf1	58	76.755	Oryzias_latipes_hni
ENSPPRG00000013566	SF1	58	81.370	ENSORLG00015012855	sf1	59	76.499	Oryzias_latipes_hsok
ENSPPRG00000013566	SF1	58	82.740	ENSOMEG00000005210	sf1	60	77.698	Oryzias_melastigma
ENSPPRG00000013566	SF1	98	99.841	ENSOGAG00000016196	SF1	98	99.841	Otolemur_garnettii
ENSPPRG00000013566	SF1	85	92.463	ENSOARG00000009166	SF1	95	95.212	Ovis_aries
ENSPPRG00000013566	SF1	100	100.000	ENSPPAG00000002799	-	100	100.000	Pan_paniscus
ENSPPRG00000013566	SF1	69	99.091	ENSPTIG00000016141	SF1	79	99.093	Panthera_tigris_altaica
ENSPPRG00000013566	SF1	98	100.000	ENSPTRG00000003846	SF1	98	100.000	Pan_troglodytes
ENSPPRG00000013566	SF1	98	95.827	ENSPANG00000020754	SF1	98	100.000	Papio_anubis
ENSPPRG00000013566	SF1	53	79.880	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSPPRG00000013566	SF1	57	86.895	ENSPSIG00000003610	SF1	97	75.490	Pelodiscus_sinensis
ENSPPRG00000013566	SF1	98	99.362	ENSPEMG00000010463	Sf1	98	99.362	Peromyscus_maniculatus_bairdii
ENSPPRG00000013566	SF1	53	72.321	ENSPMAG00000008272	sf1	53	66.938	Petromyzon_marinus
ENSPPRG00000013566	SF1	100	99.021	ENSPCIG00000018173	SF1	98	98.246	Phascolarctos_cinereus
ENSPPRG00000013566	SF1	57	86.648	ENSPFOG00000013683	sf1	66	80.685	Poecilia_formosa
ENSPPRG00000013566	SF1	57	85.042	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSPPRG00000013566	SF1	57	85.042	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSPPRG00000013566	SF1	57	84.488	ENSPREG00000004155	sf1	59	78.708	Poecilia_reticulata
ENSPPRG00000013566	SF1	98	99.841	ENSPPYG00000003098	-	98	100.000	Pongo_abelii
ENSPPRG00000013566	SF1	86	97.607	ENSPCAG00000013631	SF1	87	97.607	Procavia_capensis
ENSPPRG00000013566	SF1	100	99.837	ENSPCOG00000027546	SF1	98	99.841	Propithecus_coquereli
ENSPPRG00000013566	SF1	86	98.797	ENSPVAG00000016938	SF1	88	98.797	Pteropus_vampyrus
ENSPPRG00000013566	SF1	58	83.978	ENSPNYG00000004673	sf1	59	78.417	Pundamilia_nyererei
ENSPPRG00000013566	SF1	58	86.981	ENSPNAG00000013072	sf1	59	79.805	Pygocentrus_nattereri
ENSPPRG00000013566	SF1	100	99.347	ENSRNOG00000021085	Sf1	96	99.347	Rattus_norvegicus
ENSPPRG00000013566	SF1	100	95.759	ENSRBIG00000042818	SF1	98	95.853	Rhinopithecus_bieti
ENSPPRG00000013566	SF1	98	87.342	ENSRROG00000045655	SF1	100	100.000	Rhinopithecus_roxellana
ENSPPRG00000013566	SF1	61	37.587	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSPPRG00000013566	SF1	95	82.676	ENSSBOG00000022267	-	94	85.372	Saimiri_boliviensis_boliviensis
ENSPPRG00000013566	SF1	62	93.506	ENSSHAG00000006841	SF1	73	94.763	Sarcophilus_harrisii
ENSPPRG00000013566	SF1	62	81.510	ENSSFOG00015021978	sf1	55	77.053	Scleropages_formosus
ENSPPRG00000013566	SF1	64	76.961	ENSSMAG00000007549	sf1	63	76.471	Scophthalmus_maximus
ENSPPRG00000013566	SF1	58	80.688	ENSSDUG00000003903	sf1	61	77.240	Seriola_dumerili
ENSPPRG00000013566	SF1	57	81.016	ENSSLDG00000013075	sf1	59	77.240	Seriola_lalandi_dorsalis
ENSPPRG00000013566	SF1	82	95.618	ENSSARG00000008180	SF1	100	95.745	Sorex_araneus
ENSPPRG00000013566	SF1	82	82.759	ENSSPUG00000012907	SF1	86	81.226	Sphenodon_punctatus
ENSPPRG00000013566	SF1	57	82.548	ENSSPAG00000019060	sf1	58	76.998	Stegastes_partitus
ENSPPRG00000013566	SF1	100	99.837	ENSSSCG00000013021	SF1	100	99.809	Sus_scrofa
ENSPPRG00000013566	SF1	83	62.136	ENSTNIG00000004820	sf1	78	69.305	Tetraodon_nigroviridis
ENSPPRG00000013566	SF1	97	84.422	ENSTBEG00000013133	SF1	77	100.000	Tupaia_belangeri
ENSPPRG00000013566	SF1	82	95.030	ENSTTRG00000008857	SF1	100	95.717	Tursiops_truncatus
ENSPPRG00000013566	SF1	85	97.137	ENSUAMG00000011977	SF1	100	97.137	Ursus_americanus
ENSPPRG00000013566	SF1	83	98.416	ENSUMAG00000007268	SF1	89	100.000	Ursus_maritimus
ENSPPRG00000013566	SF1	55	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSPPRG00000013566	SF1	82	99.602	ENSVVUG00000028585	SF1	98	100.000	Vulpes_vulpes
ENSPPRG00000013566	SF1	97	70.656	ENSXETG00000008434	sf1	68	81.752	Xenopus_tropicalis
ENSPPRG00000013566	SF1	58	85.836	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSPPRG00000013566	SF1	58	84.254	ENSXMAG00000007822	sf1	61	79.426	Xiphophorus_maculatus