EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000014350 (Gene tree)
Gene ID: -
Gene Symbol: SLIRP
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 12136 bases
Position: chrKV860381.1:4588026-4600161
Accession: 20495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000024127	RRM_1	PF00076.22	5.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000022933	SLIRP-201	294	-	ENSPPRP00000024127	98 (aa)	-	-

Gene Model

Click here to download ENSPPRG00000014350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000014350's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000014350	SLIRP	85	33.846	ENSPPRG00000020542	HNRNPAB	54	33.846
ENSPPRG00000014350	SLIRP	72	31.250	ENSPPRG00000001848	MSI2	55	31.250
ENSPPRG00000014350	SLIRP	69	30.882	ENSPPRG00000009507	RBM38	55	31.343

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000014350	SLIRP	84	81.928	ENSG00000119705	SLIRP	99	81.443	Homo_sapiens
ENSPPRG00000014350	SLIRP	68	61.194	ENSAPOG00000001298	slirp	67	61.194	Acanthochromis_polyacanthus
ENSPPRG00000014350	SLIRP	91	87.640	ENSAMEG00000003975	SLIRP	98	87.640	Ailuropoda_melanoleuca
ENSPPRG00000014350	SLIRP	81	54.430	ENSACIG00000023083	slirp	78	54.430	Amphilophus_citrinellus
ENSPPRG00000014350	SLIRP	76	61.842	ENSAOCG00000006342	slirp	77	61.842	Amphiprion_ocellaris
ENSPPRG00000014350	SLIRP	82	58.537	ENSAPEG00000015719	-	78	61.842	Amphiprion_percula
ENSPPRG00000014350	SLIRP	82	58.537	ENSAPEG00000015917	slirp	77	61.842	Amphiprion_percula
ENSPPRG00000014350	SLIRP	68	56.716	ENSATEG00000013525	slirp	67	56.716	Anabas_testudineus
ENSPPRG00000014350	SLIRP	66	61.538	ENSAMXG00000018693	slirp	65	61.538	Astyanax_mexicanus
ENSPPRG00000014350	SLIRP	98	84.536	ENSCJAG00000016946	SLIRP	99	84.536	Callithrix_jacchus
ENSPPRG00000014350	SLIRP	90	79.545	ENSCAFG00020015876	-	79	79.545	Canis_lupus_dingo
ENSPPRG00000014350	SLIRP	91	83.146	ENSCCAG00000030130	SLIRP	82	83.146	Cebus_capucinus
ENSPPRG00000014350	SLIRP	98	78.351	ENSCATG00000036327	SLIRP	99	78.351	Cercocebus_atys
ENSPPRG00000014350	SLIRP	80	79.487	ENSCSAG00000011736	SLIRP	82	79.775	Chlorocebus_sabaeus
ENSPPRG00000014350	SLIRP	81	53.086	ENSCPBG00000026327	SLIRP	82	53.086	Chrysemys_picta_bellii
ENSPPRG00000014350	SLIRP	82	82.716	ENSCANG00000032892	SLIRP	99	79.381	Colobus_angolensis_palliatus
ENSPPRG00000014350	SLIRP	90	80.682	ENSCGRG00001024068	Slirp	79	80.682	Cricetulus_griseus_chok1gshd
ENSPPRG00000014350	SLIRP	90	80.682	ENSCGRG00000017440	Slirp	79	80.682	Cricetulus_griseus_crigri
ENSPPRG00000014350	SLIRP	68	62.687	ENSCSEG00000015766	slirp	68	62.687	Cynoglossus_semilaevis
ENSPPRG00000014350	SLIRP	79	54.545	ENSCVAG00000012504	slirp	76	54.545	Cyprinodon_variegatus
ENSPPRG00000014350	SLIRP	69	58.824	ENSDARG00000097753	slirp	74	56.579	Danio_rerio
ENSPPRG00000014350	SLIRP	76	71.622	ENSDNOG00000007721	SLIRP	81	70.787	Dasypus_novemcinctus
ENSPPRG00000014350	SLIRP	91	83.146	ENSDORG00000012379	Slirp	80	83.146	Dipodomys_ordii
ENSPPRG00000014350	SLIRP	79	77.922	ENSETEG00000010345	SLIRP	81	77.273	Echinops_telfairi
ENSPPRG00000014350	SLIRP	90	92.045	ENSEASG00005020193	SLIRP	79	92.045	Equus_asinus_asinus
ENSPPRG00000014350	SLIRP	86	65.476	ENSEEUG00000007257	SLIRP	83	65.476	Erinaceus_europaeus
ENSPPRG00000014350	SLIRP	66	60.000	ENSELUG00000016800	slirp	64	60.000	Esox_lucius
ENSPPRG00000014350	SLIRP	100	98.980	ENSFCAG00000036326	SLIRP	100	98.980	Felis_catus
ENSPPRG00000014350	SLIRP	68	53.731	ENSFALG00000012583	SLIRP	88	48.421	Ficedula_albicollis
ENSPPRG00000014350	SLIRP	91	74.468	ENSFDAG00000008347	SLIRP	83	74.468	Fukomys_damarensis
ENSPPRG00000014350	SLIRP	59	55.172	ENSFHEG00000004709	slirp	63	55.172	Fundulus_heteroclitus
ENSPPRG00000014350	SLIRP	68	58.209	ENSGMOG00000016948	slirp	64	58.209	Gadus_morhua
ENSPPRG00000014350	SLIRP	85	49.398	ENSGALG00000031238	SLIRP	84	49.398	Gallus_gallus
ENSPPRG00000014350	SLIRP	71	58.571	ENSGAFG00000010998	slirp	70	58.571	Gambusia_affinis
ENSPPRG00000014350	SLIRP	69	57.353	ENSGACG00000020137	slirp	79	57.353	Gasterosteus_aculeatus
ENSPPRG00000014350	SLIRP	81	59.259	ENSGAGG00000009953	SLIRP	56	59.259	Gopherus_agassizii
ENSPPRG00000014350	SLIRP	84	81.928	ENSGGOG00000011059	-	99	81.443	Gorilla_gorilla
ENSPPRG00000014350	SLIRP	90	72.727	ENSHGLG00000018491	SLIRP	79	72.727	Heterocephalus_glaber_female
ENSPPRG00000014350	SLIRP	90	72.727	ENSHGLG00100014153	SLIRP	79	72.727	Heterocephalus_glaber_male
ENSPPRG00000014350	SLIRP	76	57.895	ENSHCOG00000006795	slirp	77	57.895	Hippocampus_comes
ENSPPRG00000014350	SLIRP	66	60.000	ENSIPUG00000010214	SLIRP	65	60.000	Ictalurus_punctatus
ENSPPRG00000014350	SLIRP	81	86.076	ENSSTOG00000034316	SLIRP	81	85.556	Ictidomys_tridecemlineatus
ENSPPRG00000014350	SLIRP	76	48.684	ENSKMAG00000002038	slirp	73	48.684	Kryptolebias_marmoratus
ENSPPRG00000014350	SLIRP	68	56.716	ENSLBEG00000007564	slirp	67	56.716	Labrus_bergylta
ENSPPRG00000014350	SLIRP	71	55.714	ENSLACG00000013434	SLIRP	67	55.714	Latimeria_chalumnae
ENSPPRG00000014350	SLIRP	87	79.070	ENSMFAG00000042960	SLIRP	99	80.412	Macaca_fascicularis
ENSPPRG00000014350	SLIRP	87	79.070	ENSMMUG00000029256	SLIRP	99	79.381	Macaca_mulatta
ENSPPRG00000014350	SLIRP	87	79.070	ENSMNEG00000028921	SLIRP	99	80.412	Macaca_nemestrina
ENSPPRG00000014350	SLIRP	98	78.351	ENSMLEG00000043644	SLIRP	99	78.351	Mandrillus_leucophaeus
ENSPPRG00000014350	SLIRP	76	57.895	ENSMZEG00005004617	slirp	77	57.895	Maylandia_zebra
ENSPPRG00000014350	SLIRP	90	79.545	ENSMAUG00000003857	Slirp	79	79.545	Mesocricetus_auratus
ENSPPRG00000014350	SLIRP	91	78.652	ENSMICG00000012080	SLIRP	83	78.652	Microcebus_murinus
ENSPPRG00000014350	SLIRP	90	82.955	ENSMOCG00000016019	Slirp	87	82.955	Microtus_ochrogaster
ENSPPRG00000014350	SLIRP	69	58.824	ENSMMOG00000018268	slirp	68	58.824	Mola_mola
ENSPPRG00000014350	SLIRP	70	69.565	ENSMODG00000005207	-	97	69.565	Monodelphis_domestica
ENSPPRG00000014350	SLIRP	69	54.412	ENSMALG00000012581	slirp	69	54.412	Monopterus_albus
ENSPPRG00000014350	SLIRP	90	80.682	MGP_CAROLIEiJ_G0017995	Slirp	81	80.682	Mus_caroli
ENSPPRG00000014350	SLIRP	90	81.818	ENSMUSG00000021040	Slirp	89	81.818	Mus_musculus
ENSPPRG00000014350	SLIRP	90	81.818	MGP_SPRETEiJ_G0018840	Slirp	79	81.818	Mus_spretus
ENSPPRG00000014350	SLIRP	79	84.416	ENSMLUG00000029544	-	79	82.955	Myotis_lucifugus
ENSPPRG00000014350	SLIRP	74	84.932	ENSMLUG00000024998	-	79	84.091	Myotis_lucifugus
ENSPPRG00000014350	SLIRP	90	77.273	ENSNGAG00000016363	Slirp	81	77.273	Nannospalax_galili
ENSPPRG00000014350	SLIRP	86	70.238	ENSNLEG00000027238	-	97	70.238	Nomascus_leucogenys
ENSPPRG00000014350	SLIRP	98	76.289	ENSNLEG00000032459	-	99	76.289	Nomascus_leucogenys
ENSPPRG00000014350	SLIRP	91	77.528	ENSODEG00000012580	SLIRP	97	77.528	Octodon_degus
ENSPPRG00000014350	SLIRP	76	57.895	ENSONIG00000011692	slirp	77	57.895	Oreochromis_niloticus
ENSPPRG00000014350	SLIRP	84	67.073	ENSOANG00000022366	SLIRP	70	67.073	Ornithorhynchus_anatinus
ENSPPRG00000014350	SLIRP	68	61.194	ENSORLG00000010761	slirp	52	61.194	Oryzias_latipes
ENSPPRG00000014350	SLIRP	68	62.687	ENSORLG00020022188	slirp	67	62.687	Oryzias_latipes_hni
ENSPPRG00000014350	SLIRP	81	55.696	ENSORLG00015020171	slirp	78	55.696	Oryzias_latipes_hsok
ENSPPRG00000014350	SLIRP	68	59.701	ENSOMEG00000019321	slirp	67	59.701	Oryzias_melastigma
ENSPPRG00000014350	SLIRP	83	81.707	ENSPPAG00000040710	-	98	81.250	Pan_paniscus
ENSPPRG00000014350	SLIRP	100	100.000	ENSPTIG00000014196	SLIRP	100	100.000	Panthera_tigris_altaica
ENSPPRG00000014350	SLIRP	83	81.707	ENSPTRG00000030691	SLIRP	98	81.250	Pan_troglodytes
ENSPPRG00000014350	SLIRP	98	79.381	ENSPANG00000026323	SLIRP	99	79.381	Papio_anubis
ENSPPRG00000014350	SLIRP	59	56.897	ENSPKIG00000008831	slirp	57	56.897	Paramormyrops_kingsleyae
ENSPPRG00000014350	SLIRP	69	63.235	ENSPMGG00000010541	slirp	78	63.235	Periophthalmus_magnuspinnatus
ENSPPRG00000014350	SLIRP	79	81.818	ENSPEMG00000013234	Slirp	86	80.682	Peromyscus_maniculatus_bairdii
ENSPPRG00000014350	SLIRP	61	55.000	ENSPMAG00000009355	slirp	67	55.000	Petromyzon_marinus
ENSPPRG00000014350	SLIRP	81	65.432	ENSPCIG00000026842	-	87	65.432	Phascolarctos_cinereus
ENSPPRG00000014350	SLIRP	71	54.286	ENSPFOG00000006758	slirp	70	54.286	Poecilia_formosa
ENSPPRG00000014350	SLIRP	71	54.286	ENSPLAG00000011140	slirp	70	54.286	Poecilia_latipinna
ENSPPRG00000014350	SLIRP	71	54.286	ENSPMEG00000019535	slirp	70	54.286	Poecilia_mexicana
ENSPPRG00000014350	SLIRP	71	54.286	ENSPREG00000011673	slirp	70	54.286	Poecilia_reticulata
ENSPPRG00000014350	SLIRP	86	71.264	ENSPPYG00000006030	SLIRP	90	72.449	Pongo_abelii
ENSPPRG00000014350	SLIRP	100	75.510	ENSPCOG00000015159	SLIRP	92	75.510	Propithecus_coquereli
ENSPPRG00000014350	SLIRP	69	69.118	ENSPNAG00000008633	slirp	69	69.118	Pygocentrus_nattereri
ENSPPRG00000014350	SLIRP	82	76.250	ENSRBIG00000032998	-	84	76.923	Rhinopithecus_bieti
ENSPPRG00000014350	SLIRP	87	79.070	ENSRBIG00000032222	-	99	79.381	Rhinopithecus_bieti
ENSPPRG00000014350	SLIRP	80	74.359	ENSRBIG00000035817	-	83	75.281	Rhinopithecus_bieti
ENSPPRG00000014350	SLIRP	77	80.000	ENSRBIG00000031396	-	86	80.233	Rhinopithecus_bieti
ENSPPRG00000014350	SLIRP	86	73.810	ENSRROG00000041312	-	94	74.737	Rhinopithecus_roxellana
ENSPPRG00000014350	SLIRP	77	81.333	ENSRROG00000035604	-	86	81.395	Rhinopithecus_roxellana
ENSPPRG00000014350	SLIRP	87	77.907	ENSRROG00000036656	-	99	78.351	Rhinopithecus_roxellana
ENSPPRG00000014350	SLIRP	79	79.221	ENSRROG00000017133	-	97	77.419	Rhinopithecus_roxellana
ENSPPRG00000014350	SLIRP	97	82.292	ENSSBOG00000020014	SLIRP	97	83.333	Saimiri_boliviensis_boliviensis
ENSPPRG00000014350	SLIRP	68	67.164	ENSSFOG00015011165	slirp	68	67.164	Scleropages_formosus
ENSPPRG00000014350	SLIRP	89	42.529	ENSSMAG00000012930	slirp	75	42.529	Scophthalmus_maximus
ENSPPRG00000014350	SLIRP	69	61.765	ENSSLDG00000023136	slirp	62	61.765	Seriola_lalandi_dorsalis
ENSPPRG00000014350	SLIRP	69	52.941	ENSSPUG00000009346	SLIRP	69	52.941	Sphenodon_punctatus
ENSPPRG00000014350	SLIRP	68	55.224	ENSSPAG00000013477	slirp	67	55.224	Stegastes_partitus
ENSPPRG00000014350	SLIRP	91	83.146	ENSSSCG00000028167	SLIRP	80	83.146	Sus_scrofa
ENSPPRG00000014350	SLIRP	68	55.224	ENSTGUG00000012337	SLIRP	88	49.474	Taeniopygia_guttata
ENSPPRG00000014350	SLIRP	68	54.412	ENSTRUG00000020127	slirp	67	54.412	Takifugu_rubripes
ENSPPRG00000014350	SLIRP	91	88.764	ENSUAMG00000022445	SLIRP	80	88.764	Ursus_americanus
ENSPPRG00000014350	SLIRP	91	88.764	ENSUMAG00000007166	SLIRP	80	88.764	Ursus_maritimus
ENSPPRG00000014350	SLIRP	90	85.227	ENSVPAG00000001781	SLIRP	81	85.227	Vicugna_pacos
ENSPPRG00000014350	SLIRP	72	88.732	ENSVVUG00000004436	SLIRP	79	84.091	Vulpes_vulpes
ENSPPRG00000014350	SLIRP	68	59.701	ENSXETG00000030343	SLIRP	75	59.701	Xenopus_tropicalis
ENSPPRG00000014350	SLIRP	71	55.714	ENSXCOG00000009422	slirp	70	55.714	Xiphophorus_couchianus
ENSPPRG00000014350	SLIRP	71	57.143	ENSXMAG00000015655	slirp	70	57.143	Xiphophorus_maculatus