EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000014581 (Gene tree)
Gene ID: -
Gene Symbol: SMG6
Alias: -
Full Name: SMG6%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 244393 bases
Position: chrKV860398.1:1598672-1843064
Accession: 17809
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000024315	EST1	PF10374.9	3.4e-15	1	1
ENSPPRP00000024315	EST1_DNA_bind	PF10373.9	7.3e-61	1	1
ENSPPRP00000024315	PIN_4	PF13638.6	1.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000023171	SMG6-201	4242	-	ENSPPRP00000024315	1413 (aa)	-	-

Gene Model

Click here to download ENSPPRG00000014581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000014581's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000014581	SMG6	100	94.010	ENSG00000070366	SMG6	100	99.187	Homo_sapiens
ENSPPRG00000014581	SMG6	89	53.245	ENSAPOG00000019448	smg6	74	55.469	Acanthochromis_polyacanthus
ENSPPRG00000014581	SMG6	100	97.316	ENSAMEG00000007632	SMG6	100	97.316	Ailuropoda_melanoleuca
ENSPPRG00000014581	SMG6	83	54.961	ENSAOCG00000002630	smg6	74	54.891	Amphiprion_ocellaris
ENSPPRG00000014581	SMG6	83	55.197	ENSAPEG00000019101	smg6	74	55.047	Amphiprion_percula
ENSPPRG00000014581	SMG6	83	55.364	ENSATEG00000006483	smg6	73	55.418	Anabas_testudineus
ENSPPRG00000014581	SMG6	87	56.952	ENSACAG00000011783	SMG6	99	58.110	Anolis_carolinensis
ENSPPRG00000014581	SMG6	100	93.939	ENSANAG00000035760	SMG6	100	93.939	Aotus_nancymaae
ENSPPRG00000014581	SMG6	72	59.447	ENSACLG00000005288	smg6	80	55.199	Astatotilapia_calliptera
ENSPPRG00000014581	SMG6	69	63.471	ENSAMXG00000017326	smg6	98	51.615	Astyanax_mexicanus
ENSPPRG00000014581	SMG6	100	95.400	ENSBTAG00000000267	SMG6	100	95.400	Bos_taurus
ENSPPRG00000014581	SMG6	100	93.728	ENSCJAG00000001820	SMG6	100	93.728	Callithrix_jacchus
ENSPPRG00000014581	SMG6	100	97.311	ENSCAFG00000019260	SMG6	100	97.311	Canis_familiaris
ENSPPRG00000014581	SMG6	100	97.311	ENSCAFG00020009770	SMG6	100	97.311	Canis_lupus_dingo
ENSPPRG00000014581	SMG6	100	94.975	ENSCHIG00000021998	SMG6	100	94.975	Capra_hircus
ENSPPRG00000014581	SMG6	100	94.010	ENSTSYG00000003406	SMG6	100	97.847	Carlito_syrichta
ENSPPRG00000014581	SMG6	98	78.010	ENSCAPG00000016197	SMG6	99	82.904	Cavia_aperea
ENSPPRG00000014581	SMG6	100	91.761	ENSCPOG00000014878	SMG6	100	91.761	Cavia_porcellus
ENSPPRG00000014581	SMG6	100	94.080	ENSCCAG00000035801	SMG6	100	94.080	Cebus_capucinus
ENSPPRG00000014581	SMG6	100	93.869	ENSCATG00000031956	SMG6	100	93.869	Cercocebus_atys
ENSPPRG00000014581	SMG6	100	93.517	ENSCLAG00000006748	SMG6	100	93.517	Chinchilla_lanigera
ENSPPRG00000014581	SMG6	100	94.433	ENSCSAG00000013800	SMG6	100	94.433	Chlorocebus_sabaeus
ENSPPRG00000014581	SMG6	51	95.522	ENSCHOG00000005024	-	66	95.522	Choloepus_hoffmanni
ENSPPRG00000014581	SMG6	100	72.778	ENSCPBG00000020369	SMG6	100	73.333	Chrysemys_picta_bellii
ENSPPRG00000014581	SMG6	98	94.296	ENSCANG00000031764	SMG6	100	97.260	Colobus_angolensis_palliatus
ENSPPRG00000014581	SMG6	55	89.003	ENSCGRG00001019595	Smg6	100	89.003	Cricetulus_griseus_chok1gshd
ENSPPRG00000014581	SMG6	98	85.848	ENSCGRG00000007782	Smg6	99	85.993	Cricetulus_griseus_crigri
ENSPPRG00000014581	SMG6	85	55.059	ENSCSEG00000012757	smg6	80	53.647	Cynoglossus_semilaevis
ENSPPRG00000014581	SMG6	72	57.804	ENSCVAG00000012789	smg6	74	53.901	Cyprinodon_variegatus
ENSPPRG00000014581	SMG6	100	55.573	ENSDARG00000100481	smg6	95	56.230	Danio_rerio
ENSPPRG00000014581	SMG6	100	94.221	ENSDNOG00000048283	SMG6	100	94.221	Dasypus_novemcinctus
ENSPPRG00000014581	SMG6	100	89.965	ENSDORG00000016614	Smg6	94	98.198	Dipodomys_ordii
ENSPPRG00000014581	SMG6	93	100.000	ENSETEG00000016790	SMG6	93	100.000	Echinops_telfairi
ENSPPRG00000014581	SMG6	74	50.292	ENSEBUG00000005059	smg6	71	49.758	Eptatretus_burgeri
ENSPPRG00000014581	SMG6	99	97.023	ENSEASG00005009318	SMG6	99	97.023	Equus_asinus_asinus
ENSPPRG00000014581	SMG6	99	96.740	ENSECAG00000006519	SMG6	99	96.740	Equus_caballus
ENSPPRG00000014581	SMG6	100	84.360	ENSEEUG00000003493	SMG6	100	84.360	Erinaceus_europaeus
ENSPPRG00000014581	SMG6	72	60.648	ENSELUG00000005934	smg6	69	55.957	Esox_lucius
ENSPPRG00000014581	SMG6	100	99.788	ENSFCAG00000028817	SMG6	100	99.788	Felis_catus
ENSPPRG00000014581	SMG6	98	72.954	ENSFALG00000006538	SMG6	99	73.025	Ficedula_albicollis
ENSPPRG00000014581	SMG6	100	93.023	ENSFDAG00000015106	SMG6	100	93.023	Fukomys_damarensis
ENSPPRG00000014581	SMG6	83	53.203	ENSFHEG00000013282	smg6	75	53.438	Fundulus_heteroclitus
ENSPPRG00000014581	SMG6	53	69.159	ENSGMOG00000019077	smg6	68	69.159	Gadus_morhua
ENSPPRG00000014581	SMG6	100	72.287	ENSGALG00000003108	SMG6	98	72.407	Gallus_gallus
ENSPPRG00000014581	SMG6	83	53.888	ENSGAFG00000000379	smg6	74	53.967	Gambusia_affinis
ENSPPRG00000014581	SMG6	91	54.430	ENSGACG00000020521	smg6	99	54.256	Gasterosteus_aculeatus
ENSPPRG00000014581	SMG6	98	72.507	ENSGAGG00000025617	SMG6	99	73.077	Gopherus_agassizii
ENSPPRG00000014581	SMG6	100	94.856	ENSGGOG00000017156	SMG6	100	94.856	Gorilla_gorilla
ENSPPRG00000014581	SMG6	72	59.743	ENSHBUG00000021311	smg6	74	55.643	Haplochromis_burtoni
ENSPPRG00000014581	SMG6	100	92.892	ENSHGLG00000012882	SMG6	100	92.892	Heterocephalus_glaber_female
ENSPPRG00000014581	SMG6	100	92.963	ENSHGLG00100017815	SMG6	100	92.963	Heterocephalus_glaber_male
ENSPPRG00000014581	SMG6	72	59.351	ENSHCOG00000008761	smg6	97	53.734	Hippocampus_comes
ENSPPRG00000014581	SMG6	83	55.449	ENSIPUG00000012493	smg6	75	54.988	Ictalurus_punctatus
ENSPPRG00000014581	SMG6	100	94.715	ENSSTOG00000028127	SMG6	100	94.715	Ictidomys_tridecemlineatus
ENSPPRG00000014581	SMG6	79	90.089	ENSJJAG00000015367	Smg6	95	88.118	Jaculus_jaculus
ENSPPRG00000014581	SMG6	74	58.902	ENSKMAG00000000279	smg6	78	53.747	Kryptolebias_marmoratus
ENSPPRG00000014581	SMG6	87	53.666	ENSLBEG00000002184	smg6	76	53.507	Labrus_bergylta
ENSPPRG00000014581	SMG6	55	58.561	ENSLACG00000000806	-	98	59.677	Latimeria_chalumnae
ENSPPRG00000014581	SMG6	73	65.575	ENSLOCG00000006448	smg6	99	55.325	Lepisosteus_oculatus
ENSPPRG00000014581	SMG6	100	94.080	ENSLAFG00000001261	SMG6	100	94.080	Loxodonta_africana
ENSPPRG00000014581	SMG6	100	94.433	ENSMFAG00000003394	SMG6	100	94.433	Macaca_fascicularis
ENSPPRG00000014581	SMG6	100	94.362	ENSMMUG00000023161	SMG6	100	94.362	Macaca_mulatta
ENSPPRG00000014581	SMG6	100	89.389	ENSMNEG00000044592	SMG6	100	89.389	Macaca_nemestrina
ENSPPRG00000014581	SMG6	99	91.613	ENSMLEG00000029353	SMG6	99	97.368	Mandrillus_leucophaeus
ENSPPRG00000014581	SMG6	85	55.812	ENSMAMG00000020119	smg6	80	55.709	Mastacembelus_armatus
ENSPPRG00000014581	SMG6	72	59.631	ENSMZEG00005024736	smg6	74	55.302	Maylandia_zebra
ENSPPRG00000014581	SMG6	73	67.232	ENSMGAG00000005401	-	99	67.232	Meleagris_gallopavo
ENSPPRG00000014581	SMG6	100	95.983	ENSMICG00000012913	SMG6	100	95.983	Microcebus_murinus
ENSPPRG00000014581	SMG6	100	48.252	ENSMMOG00000010883	smg6	100	48.498	Mola_mola
ENSPPRG00000014581	SMG6	100	86.709	ENSMODG00000010622	SMG6	100	86.709	Monodelphis_domestica
ENSPPRG00000014581	SMG6	83	55.156	ENSMALG00000001106	smg6	73	55.729	Monopterus_albus
ENSPPRG00000014581	SMG6	100	92.107	MGP_CAROLIEiJ_G0016729	Smg6	100	92.107	Mus_caroli
ENSPPRG00000014581	SMG6	100	91.825	ENSMUSG00000038290	Smg6	100	91.825	Mus_musculus
ENSPPRG00000014581	SMG6	100	91.749	MGP_PahariEiJ_G0017866	Smg6	100	91.749	Mus_pahari
ENSPPRG00000014581	SMG6	100	91.825	MGP_SPRETEiJ_G0017572	Smg6	100	91.825	Mus_spretus
ENSPPRG00000014581	SMG6	100	97.735	ENSMPUG00000013046	SMG6	100	97.735	Mustela_putorius_furo
ENSPPRG00000014581	SMG6	100	95.541	ENSMLUG00000005739	SMG6	100	95.541	Myotis_lucifugus
ENSPPRG00000014581	SMG6	98	91.908	ENSNGAG00000007287	Smg6	99	91.908	Nannospalax_galili
ENSPPRG00000014581	SMG6	72	59.685	ENSNBRG00000009511	smg6	81	54.753	Neolamprologus_brichardi
ENSPPRG00000014581	SMG6	98	94.261	ENSNLEG00000017171	SMG6	100	97.847	Nomascus_leucogenys
ENSPPRG00000014581	SMG6	98	83.141	ENSMEUG00000015804	SMG6	99	83.141	Notamacropus_eugenii
ENSPPRG00000014581	SMG6	62	92.308	ENSOPRG00000000579	SMG6	85	98.421	Ochotona_princeps
ENSPPRG00000014581	SMG6	100	86.559	ENSODEG00000008038	SMG6	100	85.383	Octodon_degus
ENSPPRG00000014581	SMG6	100	50.768	ENSONIG00000005594	smg6	100	51.773	Oreochromis_niloticus
ENSPPRG00000014581	SMG6	100	93.807	ENSOCUG00000013018	SMG6	100	93.948	Oryctolagus_cuniculus
ENSPPRG00000014581	SMG6	83	54.416	ENSORLG00000003317	smg6	74	55.031	Oryzias_latipes
ENSPPRG00000014581	SMG6	83	54.502	ENSORLG00020015343	smg6	74	54.724	Oryzias_latipes_hni
ENSPPRG00000014581	SMG6	83	54.374	ENSORLG00015020454	smg6	74	54.988	Oryzias_latipes_hsok
ENSPPRG00000014581	SMG6	83	53.943	ENSOMEG00000010838	smg6	75	54.301	Oryzias_melastigma
ENSPPRG00000014581	SMG6	100	94.648	ENSOGAG00000004483	SMG6	100	94.648	Otolemur_garnettii
ENSPPRG00000014581	SMG6	100	93.366	ENSOARG00000015076	SMG6	100	94.863	Ovis_aries
ENSPPRG00000014581	SMG6	100	94.856	ENSPPAG00000043296	SMG6	100	94.856	Pan_paniscus
ENSPPRG00000014581	SMG6	98	100.000	ENSPTIG00000008925	SMG6	100	100.000	Panthera_tigris_altaica
ENSPPRG00000014581	SMG6	100	94.785	ENSPTRG00000008544	SMG6	100	98.043	Pan_troglodytes
ENSPPRG00000014581	SMG6	100	94.221	ENSPANG00000024588	SMG6	100	94.221	Papio_anubis
ENSPPRG00000014581	SMG6	89	71.261	ENSPSIG00000006660	SMG6	96	71.339	Pelodiscus_sinensis
ENSPPRG00000014581	SMG6	98	60.870	ENSPMGG00000000844	smg6	100	60.870	Periophthalmus_magnuspinnatus
ENSPPRG00000014581	SMG6	100	93.023	ENSPEMG00000020707	Smg6	100	93.023	Peromyscus_maniculatus_bairdii
ENSPPRG00000014581	SMG6	100	51.236	ENSPFOG00000012035	smg6	100	51.373	Poecilia_formosa
ENSPPRG00000014581	SMG6	77	56.443	ENSPLAG00000017660	smg6	74	53.876	Poecilia_latipinna
ENSPPRG00000014581	SMG6	83	53.708	ENSPMEG00000000258	smg6	74	54.232	Poecilia_mexicana
ENSPPRG00000014581	SMG6	83	54.281	ENSPREG00000010066	smg6	74	54.046	Poecilia_reticulata
ENSPPRG00000014581	SMG6	100	89.522	ENSPPYG00000007790	SMG6	100	89.522	Pongo_abelii
ENSPPRG00000014581	SMG6	100	89.429	ENSPCAG00000000552	SMG6	100	89.429	Procavia_capensis
ENSPPRG00000014581	SMG6	100	95.490	ENSPCOG00000020925	SMG6	100	95.490	Propithecus_coquereli
ENSPPRG00000014581	SMG6	86	96.552	ENSPVAG00000002159	SMG6	86	96.552	Pteropus_vampyrus
ENSPPRG00000014581	SMG6	72	61.877	ENSPNYG00000024151	smg6	79	57.259	Pundamilia_nyererei
ENSPPRG00000014581	SMG6	98	52.599	ENSPNAG00000015480	smg6	87	63.375	Pygocentrus_nattereri
ENSPPRG00000014581	SMG6	100	92.319	ENSRNOG00000003041	Smg6	100	92.319	Rattus_norvegicus
ENSPPRG00000014581	SMG6	100	94.221	ENSRBIG00000024746	SMG6	100	94.221	Rhinopithecus_bieti
ENSPPRG00000014581	SMG6	100	94.292	ENSRROG00000030423	SMG6	100	96.869	Rhinopithecus_roxellana
ENSPPRG00000014581	SMG6	100	93.798	ENSSBOG00000022518	SMG6	100	92.107	Saimiri_boliviensis_boliviensis
ENSPPRG00000014581	SMG6	99	86.195	ENSSHAG00000010045	SMG6	98	86.195	Sarcophilus_harrisii
ENSPPRG00000014581	SMG6	72	62.825	ENSSFOG00015005436	smg6	70	57.619	Scleropages_formosus
ENSPPRG00000014581	SMG6	83	55.521	ENSSMAG00000019777	smg6	73	55.113	Scophthalmus_maximus
ENSPPRG00000014581	SMG6	89	53.358	ENSSDUG00000016412	smg6	79	53.314	Seriola_dumerili
ENSPPRG00000014581	SMG6	86	52.489	ENSSLDG00000020747	smg6	83	52.445	Seriola_lalandi_dorsalis
ENSPPRG00000014581	SMG6	99	70.609	ENSSPUG00000007152	SMG6	99	70.539	Sphenodon_punctatus
ENSPPRG00000014581	SMG6	83	54.082	ENSSPAG00000015633	smg6	74	54.602	Stegastes_partitus
ENSPPRG00000014581	SMG6	100	95.827	ENSSSCG00000017826	SMG6	100	95.827	Sus_scrofa
ENSPPRG00000014581	SMG6	100	73.001	ENSTGUG00000005836	SMG6	100	73.142	Taeniopygia_guttata
ENSPPRG00000014581	SMG6	83	55.290	ENSTRUG00000000358	smg6	81	55.288	Takifugu_rubripes
ENSPPRG00000014581	SMG6	100	50.495	ENSTNIG00000016164	smg6	100	50.296	Tetraodon_nigroviridis
ENSPPRG00000014581	SMG6	100	89.641	ENSTBEG00000011424	SMG6	100	89.641	Tupaia_belangeri
ENSPPRG00000014581	SMG6	91	92.926	ENSTTRG00000001175	SMG6	91	92.926	Tursiops_truncatus
ENSPPRG00000014581	SMG6	100	97.669	ENSUAMG00000025152	SMG6	100	97.669	Ursus_americanus
ENSPPRG00000014581	SMG6	98	97.902	ENSUMAG00000009306	SMG6	100	97.902	Ursus_maritimus
ENSPPRG00000014581	SMG6	85	100.000	ENSVPAG00000000225	SMG6	88	100.000	Vicugna_pacos
ENSPPRG00000014581	SMG6	100	97.028	ENSVVUG00000021727	SMG6	100	97.028	Vulpes_vulpes
ENSPPRG00000014581	SMG6	98	59.944	ENSXETG00000023799	SMG6	99	59.760	Xenopus_tropicalis
ENSPPRG00000014581	SMG6	83	55.136	ENSXCOG00000009867	smg6	74	55.048	Xiphophorus_couchianus
ENSPPRG00000014581	SMG6	83	54.517	ENSXMAG00000010321	smg6	74	54.281	Xiphophorus_maculatus