EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000014642 (Gene tree)
Gene ID: 109265793
Gene Symbol: -
Alias: -
Full Name: RAB%2C member of RAS oncogene family like 2B
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 20905 bases
Position: chrKV860285.1:35083202-35104106
Accession: 109265793
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000024107	MMR_HSR1	PF01926.23	2.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000022881	-	300	-	ENSPPRP00000024078	100 (aa)	-	UPI000DE7C4AE
ENSPPRT00000022918	-	681	XM_019447349	ENSPPRP00000024107	227 (aa)	XP_019302894	-
ENSPPRT00000022890	-	486	-	ENSPPRP00000024087	162 (aa)	-	-

Gene Model

Click here to download ENSPPRG00000014642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000014642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000014642	-	63	30.612	ENSPPRG00000003974	RAB17	69	30.612
ENSPPRG00000014642	-	51	34.483	ENSPPRG00000015082	RAB31	59	34.483
ENSPPRG00000014642	-	63	34.000	ENSPPRG00000012945	RAB2A	74	34.328
ENSPPRG00000014642	-	64	36.129	ENSPPRG00000003104	-	74	36.129
ENSPPRG00000014642	-	63	36.913	ENSPPRG00000010160	RAB11B	73	36.913
ENSPPRG00000014642	-	66	35.065	ENSPPRG00000005745	RAB5C	71	35.065
ENSPPRG00000014642	-	63	33.333	ENSPPRG00000005831	RAB2B	69	33.333
ENSPPRG00000014642	-	75	33.143	ENSPPRG00000023881	RAB30	86	33.143
ENSPPRG00000014642	-	70	33.939	ENSPPRG00000024521	RAB12	68	33.939
ENSPPRG00000014642	-	63	36.842	ENSPPRG00000010280	-	74	36.842
ENSPPRG00000014642	-	72	34.659	ENSPPRG00000017129	RAB9A	85	34.659
ENSPPRG00000014642	-	62	36.735	ENSPPRG00000023944	RAB33A	62	36.735
ENSPPRG00000014642	-	63	30.667	ENSPPRG00000008865	-	73	30.667
ENSPPRG00000014642	-	63	36.913	ENSPPRG00000010471	RAB11A	69	36.913
ENSPPRG00000014642	-	63	38.255	ENSPPRG00000010314	RAB18	72	38.255
ENSPPRG00000014642	-	63	30.872	ENSPPRG00000007555	RAB15	70	30.872
ENSPPRG00000014642	-	70	35.260	ENSPPRG00000011181	RAB9B	84	35.260
ENSPPRG00000014642	-	63	30.201	ENSPPRG00000023437	RAB6B	72	30.201
ENSPPRG00000014642	-	53	37.097	ENSPPRG00000016807	RAB22A	63	37.097
ENSPPRG00000014642	-	68	30.247	ENSPPRG00000017193	RAB39B	75	30.247
ENSPPRG00000014642	-	50	39.130	ENSPPRG00000001655	-	53	39.130
ENSPPRG00000014642	-	63	30.201	ENSPPRG00000006611	RAB25	70	30.201
ENSPPRG00000014642	-	63	36.184	ENSPPRG00000025077	RAB1A	73	36.184
ENSPPRG00000014642	-	66	34.194	ENSPPRG00000021393	RAB14	72	34.194
ENSPPRG00000014642	-	75	31.609	ENSPPRG00000013225	RAB35	86	31.609
ENSPPRG00000014642	-	62	35.374	ENSPPRG00000006119	RAB33B	64	35.374

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000014642	-	100	86.087	ENSG00000079974	RABL2B	100	92.929	Homo_sapiens
ENSPPRG00000014642	-	96	89.041	ENSG00000144134	RABL2A	100	92.982	Homo_sapiens
ENSPPRG00000014642	-	92	77.033	ENSAPOG00000023708	rabl2	93	77.033	Acanthochromis_polyacanthus
ENSPPRG00000014642	-	99	91.266	ENSAMEG00000003173	-	100	91.266	Ailuropoda_melanoleuca
ENSPPRG00000014642	-	90	74.757	ENSACIG00000000670	rabl2	92	74.757	Amphilophus_citrinellus
ENSPPRG00000014642	-	92	77.512	ENSAOCG00000008069	rabl2	93	77.512	Amphiprion_ocellaris
ENSPPRG00000014642	-	92	77.033	ENSAPEG00000003164	rabl2	93	77.033	Amphiprion_percula
ENSPPRG00000014642	-	92	77.512	ENSATEG00000001111	rabl2	93	77.512	Anabas_testudineus
ENSPPRG00000014642	-	70	88.820	ENSACAG00000000418	-	91	88.820	Anolis_carolinensis
ENSPPRG00000014642	-	100	84.416	ENSANAG00000021001	-	100	84.416	Aotus_nancymaae
ENSPPRG00000014642	-	91	76.812	ENSACLG00000025632	rabl2	92	76.812	Astatotilapia_calliptera
ENSPPRG00000014642	-	93	77.934	ENSAMXG00000040611	rabl2	95	77.934	Astyanax_mexicanus
ENSPPRG00000014642	-	90	93.171	ENSBTAG00000004876	RABL2B	96	89.545	Bos_taurus
ENSPPRG00000014642	-	100	85.714	ENSCJAG00000018414	-	100	85.714	Callithrix_jacchus
ENSPPRG00000014642	-	99	92.444	ENSCAFG00020006938	-	100	92.444	Canis_lupus_dingo
ENSPPRG00000014642	-	95	86.667	ENSCHIG00000000591	-	97	87.111	Capra_hircus
ENSPPRG00000014642	-	96	87.273	ENSTSYG00000004323	-	95	87.273	Carlito_syrichta
ENSPPRG00000014642	-	96	88.128	ENSCPOG00000026899	-	98	88.128	Cavia_porcellus
ENSPPRG00000014642	-	100	85.714	ENSCCAG00000025944	-	100	85.714	Cebus_capucinus
ENSPPRG00000014642	-	100	84.848	ENSCATG00000034307	-	100	84.848	Cercocebus_atys
ENSPPRG00000014642	-	96	89.091	ENSCLAG00000017218	-	98	89.091	Chinchilla_lanigera
ENSPPRG00000014642	-	95	89.815	ENSCSAG00000004698	-	93	89.815	Chlorocebus_sabaeus
ENSPPRG00000014642	-	87	84.422	ENSCPBG00000011715	-	88	84.422	Chrysemys_picta_bellii
ENSPPRG00000014642	-	80	66.484	ENSCING00000004961	-	84	66.484	Ciona_intestinalis
ENSPPRG00000014642	-	80	67.582	ENSCSAVG00000006042	-	87	67.582	Ciona_savignyi
ENSPPRG00000014642	-	96	88.128	ENSCANG00000030879	-	95	88.128	Colobus_angolensis_palliatus
ENSPPRG00000014642	-	99	86.222	ENSCGRG00001021894	Rabl2	100	86.222	Cricetulus_griseus_chok1gshd
ENSPPRG00000014642	-	90	75.610	ENSCSEG00000005479	rabl2	92	75.120	Cynoglossus_semilaevis
ENSPPRG00000014642	-	89	76.471	ENSCVAG00000011432	rabl2	92	76.471	Cyprinodon_variegatus
ENSPPRG00000014642	-	90	76.699	ENSDARG00000063321	rabl2	93	76.699	Danio_rerio
ENSPPRG00000014642	-	96	93.119	ENSDNOG00000035151	-	97	93.119	Dasypus_novemcinctus
ENSPPRG00000014642	-	96	88.182	ENSDORG00000000003	Rabl2	98	88.182	Dipodomys_ordii
ENSPPRG00000014642	-	99	92.444	ENSEASG00005008239	-	100	92.444	Equus_asinus_asinus
ENSPPRG00000014642	-	99	92.000	ENSECAG00000026942	-	100	92.000	Equus_caballus
ENSPPRG00000014642	-	100	99.559	ENSFCAG00000033642	-	100	99.559	Felis_catus
ENSPPRG00000014642	-	96	88.182	ENSFDAG00000002113	-	98	88.182	Fukomys_damarensis
ENSPPRG00000014642	-	92	77.033	ENSFHEG00000015015	rabl2	78	77.033	Fundulus_heteroclitus
ENSPPRG00000014642	-	87	75.377	ENSGMOG00000018928	rabl2	100	75.377	Gadus_morhua
ENSPPRG00000014642	-	91	80.769	ENSGALG00000032458	RABL2B	92	80.769	Gallus_gallus
ENSPPRG00000014642	-	85	78.866	ENSGAFG00000005188	rabl2	89	78.500	Gambusia_affinis
ENSPPRG00000014642	-	98	72.321	ENSGACG00000012474	rabl2	100	72.197	Gasterosteus_aculeatus
ENSPPRG00000014642	-	91	76.812	ENSHBUG00000010964	rabl2	92	76.812	Haplochromis_burtoni
ENSPPRG00000014642	-	95	89.862	ENSHGLG00000005750	-	96	89.862	Heterocephalus_glaber_female
ENSPPRG00000014642	-	95	89.862	ENSHGLG00100016281	-	96	89.862	Heterocephalus_glaber_male
ENSPPRG00000014642	-	99	88.889	ENSSTOG00000002723	-	100	88.889	Ictidomys_tridecemlineatus
ENSPPRG00000014642	-	93	89.671	ENSJJAG00000010792	Rabl2	95	89.671	Jaculus_jaculus
ENSPPRG00000014642	-	92	77.033	ENSKMAG00000012723	rabl2	93	77.033	Kryptolebias_marmoratus
ENSPPRG00000014642	-	91	78.365	ENSLBEG00000003644	rabl2	92	78.365	Labrus_bergylta
ENSPPRG00000014642	-	99	76.000	ENSLACG00000003722	rabl2	99	76.000	Latimeria_chalumnae
ENSPPRG00000014642	-	91	80.288	ENSLOCG00000016767	rabl2	91	80.288	Lepisosteus_oculatus
ENSPPRG00000014642	-	100	86.522	ENSMFAG00000044775	-	100	86.522	Macaca_fascicularis
ENSPPRG00000014642	-	100	86.147	ENSMMUG00000022914	RABL2B	100	86.147	Macaca_mulatta
ENSPPRG00000014642	-	100	86.522	ENSMNEG00000028460	-	100	86.522	Macaca_nemestrina
ENSPPRG00000014642	-	100	85.652	ENSMLEG00000032621	-	100	85.652	Mandrillus_leucophaeus
ENSPPRG00000014642	-	92	77.512	ENSMAMG00000008168	rabl2	93	77.512	Mastacembelus_armatus
ENSPPRG00000014642	-	92	74.286	ENSMZEG00005019758	rabl2	96	74.286	Maylandia_zebra
ENSPPRG00000014642	-	96	85.909	ENSMAUG00000010955	Rabl2	98	85.909	Mesocricetus_auratus
ENSPPRG00000014642	-	96	93.607	ENSMICG00000031301	-	95	93.607	Microcebus_murinus
ENSPPRG00000014642	-	94	89.252	ENSMOCG00000002775	Rabl2	95	89.252	Microtus_ochrogaster
ENSPPRG00000014642	-	94	86.512	ENSMODG00000010838	-	95	86.512	Monodelphis_domestica
ENSPPRG00000014642	-	91	76.923	ENSMALG00000005944	rabl2	92	76.923	Monopterus_albus
ENSPPRG00000014642	-	94	86.047	MGP_CAROLIEiJ_G0020176	Rabl2	94	86.047	Mus_caroli
ENSPPRG00000014642	-	99	82.667	ENSMUSG00000022621	Rabl2	100	82.667	Mus_musculus
ENSPPRG00000014642	-	94	86.977	MGP_PahariEiJ_G0020181	Rabl2	96	86.977	Mus_pahari
ENSPPRG00000014642	-	94	86.047	MGP_SPRETEiJ_G0021073	Rabl2	96	86.047	Mus_spretus
ENSPPRG00000014642	-	99	92.444	ENSMPUG00000001806	-	100	92.444	Mustela_putorius_furo
ENSPPRG00000014642	-	94	86.512	ENSNGAG00000012843	Rabl2	92	86.512	Nannospalax_galili
ENSPPRG00000014642	-	91	76.812	ENSNBRG00000000489	rabl2	92	76.812	Neolamprologus_brichardi
ENSPPRG00000014642	-	100	86.087	ENSNLEG00000030435	-	100	86.087	Nomascus_leucogenys
ENSPPRG00000014642	-	96	88.182	ENSODEG00000015650	-	98	88.182	Octodon_degus
ENSPPRG00000014642	-	91	77.295	ENSONIG00000014885	rabl2	92	77.295	Oreochromis_niloticus
ENSPPRG00000014642	-	92	74.641	ENSORLG00000009874	rabl2	92	74.641	Oryzias_latipes
ENSPPRG00000014642	-	92	74.641	ENSORLG00020001721	rabl2	92	74.641	Oryzias_latipes_hni
ENSPPRG00000014642	-	92	74.641	ENSORLG00015014268	rabl2	92	74.641	Oryzias_latipes_hsok
ENSPPRG00000014642	-	92	76.077	ENSOMEG00000008576	rabl2	95	76.077	Oryzias_melastigma
ENSPPRG00000014642	-	100	89.610	ENSOGAG00000009123	-	100	89.610	Otolemur_garnettii
ENSPPRG00000014642	-	100	99.559	ENSPTIG00000018747	-	100	99.559	Panthera_tigris_altaica
ENSPPRG00000014642	-	96	85.463	ENSPTRG00000014555	-	95	85.463	Pan_troglodytes
ENSPPRG00000014642	-	100	83.613	ENSPANG00000036121	-	100	83.613	Papio_anubis
ENSPPRG00000014642	-	93	78.037	ENSPKIG00000025372	rabl2	94	78.037	Paramormyrops_kingsleyae
ENSPPRG00000014642	-	87	86.432	ENSPSIG00000014041	-	88	86.432	Pelodiscus_sinensis
ENSPPRG00000014642	-	87	75.879	ENSPMGG00000012946	rabl2	96	75.879	Periophthalmus_magnuspinnatus
ENSPPRG00000014642	-	99	85.333	ENSPEMG00000024045	Rabl2	100	85.333	Peromyscus_maniculatus_bairdii
ENSPPRG00000014642	-	86	90.355	ENSPCIG00000012436	-	80	90.355	Phascolarctos_cinereus
ENSPPRG00000014642	-	93	75.587	ENSPFOG00000017960	rabl2	95	75.587	Poecilia_formosa
ENSPPRG00000014642	-	93	76.303	ENSPLAG00000015685	rabl2	95	76.303	Poecilia_latipinna
ENSPPRG00000014642	-	93	76.303	ENSPMEG00000004703	rabl2	95	76.303	Poecilia_mexicana
ENSPPRG00000014642	-	86	77.551	ENSPREG00000014761	rabl2	96	77.551	Poecilia_reticulata
ENSPPRG00000014642	-	96	89.091	ENSPPYG00000012000	-	95	89.091	Pongo_abelii
ENSPPRG00000014642	-	96	93.182	ENSPCOG00000024865	-	95	93.182	Propithecus_coquereli
ENSPPRG00000014642	-	96	88.646	ENSPVAG00000004539	-	97	88.646	Pteropus_vampyrus
ENSPPRG00000014642	-	91	76.812	ENSPNYG00000004845	rabl2	92	76.812	Pundamilia_nyererei
ENSPPRG00000014642	-	89	79.803	ENSPNAG00000024254	rabl2	93	79.426	Pygocentrus_nattereri
ENSPPRG00000014642	-	97	86.425	ENSRNOG00000013947	Rabl2	87	86.425	Rattus_norvegicus
ENSPPRG00000014642	-	96	88.584	ENSRBIG00000033607	-	95	88.584	Rhinopithecus_bieti
ENSPPRG00000014642	-	100	86.522	ENSRROG00000031130	-	100	86.522	Rhinopithecus_roxellana
ENSPPRG00000014642	-	100	85.714	ENSSBOG00000033266	-	100	85.714	Saimiri_boliviensis_boliviensis
ENSPPRG00000014642	-	90	77.670	ENSSFOG00015020738	rabl2	100	73.333	Scleropages_formosus
ENSPPRG00000014642	-	96	73.991	ENSSMAG00000004606	rabl2	99	73.991	Scophthalmus_maximus
ENSPPRG00000014642	-	91	76.812	ENSSDUG00000014765	rabl2	92	76.812	Seriola_dumerili
ENSPPRG00000014642	-	74	94.706	ENSSSCG00000025041	-	100	94.706	Sus_scrofa
ENSPPRG00000014642	-	86	79.082	ENSTGUG00000016028	-	93	79.082	Taeniopygia_guttata
ENSPPRG00000014642	-	92	77.512	ENSTRUG00000012454	rabl2	93	77.512	Takifugu_rubripes
ENSPPRG00000014642	-	92	77.033	ENSTNIG00000017951	rabl2	93	77.033	Tetraodon_nigroviridis
ENSPPRG00000014642	-	87	96.970	ENSUAMG00000015761	-	88	96.970	Ursus_americanus
ENSPPRG00000014642	-	99	93.778	ENSUMAG00000017116	-	100	93.778	Ursus_maritimus
ENSPPRG00000014642	-	99	92.444	ENSVVUG00000025761	-	100	92.444	Vulpes_vulpes
ENSPPRG00000014642	-	91	78.261	ENSXETG00000015712	rabl2b	91	78.261	Xenopus_tropicalis
ENSPPRG00000014642	-	86	79.695	ENSXMAG00000004569	rabl2	89	79.500	Xiphophorus_maculatus