EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000014756 (Gene tree)
Gene ID: 109272432
Gene Symbol: CHD6
Alias: -
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 155185 bases
Position: chrKV860304.1:14017129-14172313
Accession: 109272432
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000024481	ResIII	PF04851.15	8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000023384	CHD6-201	8154	XM_019458478	ENSPPRP00000024481	2717 (aa)	XP_019314023	UPI0009050A5E

Gene Model

Click here to download ENSPPRG00000014756's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000014756's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000014756	CHD6	75	68.103	ENSPPRG00000022248	CHD7	71	66.076
ENSPPRG00000014756	CHD6	61	61.481	ENSPPRG00000006591	CHD8	68	63.168
ENSPPRG00000014756	CHD6	79	62.661	ENSPPRG00000004801	CHD9	72	63.952

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000014756	CHD6	100	91.988	ENSG00000124177	CHD6	99	99.660	Homo_sapiens
ENSPPRG00000014756	CHD6	74	75.413	ENSAPOG00000013736	chd6	71	69.218	Acanthochromis_polyacanthus
ENSPPRG00000014756	CHD6	100	95.326	ENSAMEG00000009496	CHD6	100	95.326	Ailuropoda_melanoleuca
ENSPPRG00000014756	CHD6	75	75.561	ENSATEG00000005608	chd6	67	71.402	Anabas_testudineus
ENSPPRG00000014756	CHD6	99	71.898	ENSAPLG00000015592	CHD6	100	72.721	Anas_platyrhynchos
ENSPPRG00000014756	CHD6	91	75.292	ENSACAG00000006842	CHD6	91	76.389	Anolis_carolinensis
ENSPPRG00000014756	CHD6	100	91.621	ENSANAG00000037548	CHD6	99	93.394	Aotus_nancymaae
ENSPPRG00000014756	CHD6	81	70.289	ENSAMXG00000009576	chd6	78	70.182	Astyanax_mexicanus
ENSPPRG00000014756	CHD6	100	89.636	ENSBTAG00000005733	CHD6	100	89.636	Bos_taurus
ENSPPRG00000014756	CHD6	100	91.437	ENSCJAG00000017920	CHD6	99	93.211	Callithrix_jacchus
ENSPPRG00000014756	CHD6	100	95.547	ENSCAFG00000009236	CHD6	100	95.547	Canis_familiaris
ENSPPRG00000014756	CHD6	99	94.826	ENSCAFG00020012906	CHD6	99	98.847	Canis_lupus_dingo
ENSPPRG00000014756	CHD6	100	89.599	ENSCHIG00000017606	CHD6	100	89.599	Capra_hircus
ENSPPRG00000014756	CHD6	84	91.104	ENSTSYG00000014635	CHD6	100	91.104	Carlito_syrichta
ENSPPRG00000014756	CHD6	100	90.511	ENSCPOG00000015641	CHD6	100	90.511	Cavia_porcellus
ENSPPRG00000014756	CHD6	100	91.804	ENSCCAG00000036828	CHD6	99	93.394	Cebus_capucinus
ENSPPRG00000014756	CHD6	100	91.804	ENSCATG00000039248	CHD6	99	93.394	Cercocebus_atys
ENSPPRG00000014756	CHD6	100	90.275	ENSCLAG00000013743	CHD6	100	90.275	Chinchilla_lanigera
ENSPPRG00000014756	CHD6	100	92.062	ENSCSAG00000013997	CHD6	100	92.062	Chlorocebus_sabaeus
ENSPPRG00000014756	CHD6	91	89.987	ENSCHOG00000012647	CHD6	95	89.987	Choloepus_hoffmanni
ENSPPRG00000014756	CHD6	99	73.282	ENSCPBG00000019382	CHD6	99	73.757	Chrysemys_picta_bellii
ENSPPRG00000014756	CHD6	100	91.915	ENSCANG00000043435	CHD6	99	93.394	Colobus_angolensis_palliatus
ENSPPRG00000014756	CHD6	100	89.003	ENSCGRG00001002694	Chd6	100	89.003	Cricetulus_griseus_chok1gshd
ENSPPRG00000014756	CHD6	82	73.947	ENSDARG00000017244	chd6	79	73.947	Danio_rerio
ENSPPRG00000014756	CHD6	99	89.709	ENSDNOG00000004176	CHD6	99	89.709	Dasypus_novemcinctus
ENSPPRG00000014756	CHD6	99	92.973	ENSEASG00005023433	CHD6	95	97.683	Equus_asinus_asinus
ENSPPRG00000014756	CHD6	99	93.743	ENSECAG00000011761	CHD6	100	93.743	Equus_caballus
ENSPPRG00000014756	CHD6	71	80.108	ENSELUG00000012309	chd6	90	80.108	Esox_lucius
ENSPPRG00000014756	CHD6	100	99.595	ENSFCAG00000003572	CHD6	100	99.595	Felis_catus
ENSPPRG00000014756	CHD6	99	71.589	ENSFALG00000012563	CHD6	98	71.766	Ficedula_albicollis
ENSPPRG00000014756	CHD6	99	90.627	ENSFDAG00000013791	CHD6	99	90.627	Fukomys_damarensis
ENSPPRG00000014756	CHD6	73	69.335	ENSGMOG00000011715	chd6	86	69.478	Gadus_morhua
ENSPPRG00000014756	CHD6	77	71.101	ENSGACG00000000037	chd6	86	69.420	Gasterosteus_aculeatus
ENSPPRG00000014756	CHD6	100	92.025	ENSGGOG00000013123	CHD6	99	93.394	Gorilla_gorilla
ENSPPRG00000014756	CHD6	80	72.340	ENSHBUG00000014701	chd6	68	71.875	Haplochromis_burtoni
ENSPPRG00000014756	CHD6	100	90.662	ENSHGLG00000004548	CHD6	100	90.699	Heterocephalus_glaber_female
ENSPPRG00000014756	CHD6	100	90.662	ENSHGLG00100006401	CHD6	100	90.699	Heterocephalus_glaber_male
ENSPPRG00000014756	CHD6	76	77.374	ENSIPUG00000003692	chd6	74	77.048	Ictalurus_punctatus
ENSPPRG00000014756	CHD6	100	91.541	ENSSTOG00000013382	CHD6	100	91.541	Ictidomys_tridecemlineatus
ENSPPRG00000014756	CHD6	87	76.295	ENSLACG00000010881	CHD6	86	76.352	Latimeria_chalumnae
ENSPPRG00000014756	CHD6	73	80.612	ENSLOCG00000007386	chd6	88	75.877	Lepisosteus_oculatus
ENSPPRG00000014756	CHD6	100	91.066	ENSLAFG00000012144	CHD6	100	91.066	Loxodonta_africana
ENSPPRG00000014756	CHD6	100	92.135	ENSMFAG00000032830	CHD6	99	93.394	Macaca_fascicularis
ENSPPRG00000014756	CHD6	100	92.135	ENSMMUG00000020458	CHD6	99	93.394	Macaca_mulatta
ENSPPRG00000014756	CHD6	100	92.135	ENSMNEG00000040847	CHD6	99	93.394	Macaca_nemestrina
ENSPPRG00000014756	CHD6	100	91.811	ENSMLEG00000031965	CHD6	99	93.394	Mandrillus_leucophaeus
ENSPPRG00000014756	CHD6	74	73.832	ENSMAMG00000013111	chd6	65	73.960	Mastacembelus_armatus
ENSPPRG00000014756	CHD6	99	71.282	ENSMGAG00000001121	CHD6	100	71.940	Meleagris_gallopavo
ENSPPRG00000014756	CHD6	100	91.499	ENSMICG00000016641	CHD6	99	92.661	Microcebus_murinus
ENSPPRG00000014756	CHD6	89	80.752	ENSMODG00000000720	-	99	80.752	Monodelphis_domestica
ENSPPRG00000014756	CHD6	100	87.201	MGP_CAROLIEiJ_G0024604	Chd6	100	94.515	Mus_caroli
ENSPPRG00000014756	CHD6	100	87.459	ENSMUSG00000057133	Chd6	100	94.430	Mus_musculus
ENSPPRG00000014756	CHD6	100	87.275	MGP_PahariEiJ_G0026048	Chd6	100	94.852	Mus_pahari
ENSPPRG00000014756	CHD6	100	87.422	MGP_SPRETEiJ_G0025526	Chd6	100	94.515	Mus_spretus
ENSPPRG00000014756	CHD6	100	93.979	ENSMPUG00000017695	CHD6	100	94.016	Mustela_putorius_furo
ENSPPRG00000014756	CHD6	100	92.129	ENSMLUG00000016247	CHD6	100	92.129	Myotis_lucifugus
ENSPPRG00000014756	CHD6	78	73.368	ENSNBRG00000013839	chd6	79	73.451	Neolamprologus_brichardi
ENSPPRG00000014756	CHD6	100	90.121	ENSNLEG00000006496	CHD6	100	90.048	Nomascus_leucogenys
ENSPPRG00000014756	CHD6	100	87.275	ENSOPRG00000013376	-	100	87.275	Ochotona_princeps
ENSPPRG00000014756	CHD6	84	74.856	ENSONIG00000000393	chd6	87	74.856	Oreochromis_niloticus
ENSPPRG00000014756	CHD6	100	70.463	ENSOANG00000014347	CHD6	99	70.612	Ornithorhynchus_anatinus
ENSPPRG00000014756	CHD6	99	89.510	ENSOCUG00000012394	CHD6	100	89.510	Oryctolagus_cuniculus
ENSPPRG00000014756	CHD6	79	70.196	ENSORLG00020021891	chd6	95	86.172	Oryzias_latipes_hni
ENSPPRG00000014756	CHD6	99	90.307	ENSOGAG00000002427	CHD6	99	90.243	Otolemur_garnettii
ENSPPRG00000014756	CHD6	99	87.201	ENSOARG00000002597	CHD6	100	87.201	Ovis_aries
ENSPPRG00000014756	CHD6	100	99.742	ENSPTIG00000011094	CHD6	100	99.742	Panthera_tigris_altaica
ENSPPRG00000014756	CHD6	100	92.098	ENSPTRG00000013504	CHD6	99	93.394	Pan_troglodytes
ENSPPRG00000014756	CHD6	100	92.135	ENSPANG00000025554	CHD6	99	93.211	Papio_anubis
ENSPPRG00000014756	CHD6	77	76.933	ENSPKIG00000005578	chd6	79	72.958	Paramormyrops_kingsleyae
ENSPPRG00000014756	CHD6	75	76.562	ENSPMGG00000014877	chd6	84	75.378	Periophthalmus_magnuspinnatus
ENSPPRG00000014756	CHD6	100	80.117	ENSPCIG00000028037	CHD6	100	80.499	Phascolarctos_cinereus
ENSPPRG00000014756	CHD6	76	69.868	ENSPLAG00000003128	chd6	69	70.400	Poecilia_latipinna
ENSPPRG00000014756	CHD6	73	72.931	ENSPREG00000022653	chd6	99	86.630	Poecilia_reticulata
ENSPPRG00000014756	CHD6	100	92.101	ENSPPYG00000011016	CHD6	100	92.101	Pongo_abelii
ENSPPRG00000014756	CHD6	99	91.642	ENSPCOG00000001089	CHD6	99	93.211	Propithecus_coquereli
ENSPPRG00000014756	CHD6	78	75.081	ENSPNYG00000022516	chd6	78	74.806	Pundamilia_nyererei
ENSPPRG00000014756	CHD6	81	70.962	ENSPNAG00000012825	chd6	79	71.420	Pygocentrus_nattereri
ENSPPRG00000014756	CHD6	100	86.650	ENSRNOG00000016744	Chd6	100	86.613	Rattus_norvegicus
ENSPPRG00000014756	CHD6	100	91.768	ENSSBOG00000022089	CHD6	99	93.394	Saimiri_boliviensis_boliviensis
ENSPPRG00000014756	CHD6	99	79.684	ENSSHAG00000017072	CHD6	99	80.088	Sarcophilus_harrisii
ENSPPRG00000014756	CHD6	78	75.992	ENSSFOG00015012920	chd6	81	72.755	Scleropages_formosus
ENSPPRG00000014756	CHD6	59	100.000	ENSSARG00000002615	-	61	100.000	Sorex_araneus
ENSPPRG00000014756	CHD6	100	92.203	ENSSSCG00000007360	CHD6	100	92.919	Sus_scrofa
ENSPPRG00000014756	CHD6	97	73.828	ENSTGUG00000003179	CHD6	99	73.900	Taeniopygia_guttata
ENSPPRG00000014756	CHD6	74	77.373	ENSTNIG00000017487	chd6	82	77.373	Tetraodon_nigroviridis
ENSPPRG00000014756	CHD6	100	89.195	ENSTTRG00000013438	CHD6	100	89.195	Tursiops_truncatus
ENSPPRG00000014756	CHD6	100	93.230	ENSUAMG00000024036	CHD6	99	94.202	Ursus_americanus
ENSPPRG00000014756	CHD6	99	95.564	ENSUMAG00000002017	CHD6	99	95.567	Ursus_maritimus
ENSPPRG00000014756	CHD6	95	90.418	ENSVPAG00000007941	CHD6	96	90.418	Vicugna_pacos
ENSPPRG00000014756	CHD6	100	95.583	ENSVVUG00000029164	CHD6	100	95.583	Vulpes_vulpes
ENSPPRG00000014756	CHD6	99	61.044	ENSXETG00000021445	chd6	99	60.860	Xenopus_tropicalis