EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000016767 (Gene tree)
Gene ID: 109266310
Gene Symbol: CMSS1
Alias: -
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 404359 bases
Position: chrKV860287.1:4461680-4866038
Accession: 109266310
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000026179	CMS1	PF14617.6	3.9e-33	1	1
ENSPPRP00000026179	DEAD	PF00270.29	3.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000025871	CMSS1-201	840	XM_019448160	ENSPPRP00000026179	279 (aa)	XP_019303705	UPI000904A44C

Gene Model

Click here to download ENSPPRG00000016767's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000016767's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000016767	CMSS1	100	92.115	ENSG00000184220	CMSS1	99	95.062	Homo_sapiens
ENSPPRG00000016767	CMSS1	72	65.347	ENSAPOG00000010604	cmss1	81	65.000	Acanthochromis_polyacanthus
ENSPPRG00000016767	CMSS1	92	94.208	ENSAMEG00000004092	CMSS1	100	94.208	Ailuropoda_melanoleuca
ENSPPRG00000016767	CMSS1	72	55.446	ENSACIG00000021854	cmss1	91	52.066	Amphilophus_citrinellus
ENSPPRG00000016767	CMSS1	100	52.218	ENSAOCG00000013361	cmss1	100	55.670	Amphiprion_ocellaris
ENSPPRG00000016767	CMSS1	72	65.347	ENSAPEG00000005829	cmss1	100	54.983	Amphiprion_percula
ENSPPRG00000016767	CMSS1	100	54.671	ENSATEG00000008209	cmss1	100	54.795	Anabas_testudineus
ENSPPRG00000016767	CMSS1	82	69.565	ENSAPLG00000010542	CMSS1	100	69.565	Anas_platyrhynchos
ENSPPRG00000016767	CMSS1	92	63.636	ENSACAG00000011065	CMSS1	97	63.636	Anolis_carolinensis
ENSPPRG00000016767	CMSS1	100	91.429	ENSANAG00000023565	CMSS1	100	91.429	Aotus_nancymaae
ENSPPRG00000016767	CMSS1	100	50.859	ENSACLG00000027294	cmss1	100	51.546	Astatotilapia_calliptera
ENSPPRG00000016767	CMSS1	100	46.622	ENSAMXG00000002046	cmss1	100	47.667	Astyanax_mexicanus
ENSPPRG00000016767	CMSS1	100	91.039	ENSBTAG00000013663	CMSS1	100	91.039	Bos_taurus
ENSPPRG00000016767	CMSS1	100	91.071	ENSCJAG00000000610	CMSS1	100	91.071	Callithrix_jacchus
ENSPPRG00000016767	CMSS1	92	95.349	ENSCAFG00000009230	CMSS1	93	95.349	Canis_familiaris
ENSPPRG00000016767	CMSS1	93	94.595	ENSCAFG00020009464	-	95	94.595	Canis_lupus_dingo
ENSPPRG00000016767	CMSS1	83	87.931	ENSCAFG00020024156	-	76	84.082	Canis_lupus_dingo
ENSPPRG00000016767	CMSS1	92	90.272	ENSCHIG00000013003	CMSS1	93	90.272	Capra_hircus
ENSPPRG00000016767	CMSS1	96	88.192	ENSTSYG00000009266	CMSS1	99	91.085	Carlito_syrichta
ENSPPRG00000016767	CMSS1	80	73.362	ENSCAPG00000013584	CMSS1	100	73.799	Cavia_aperea
ENSPPRG00000016767	CMSS1	100	89.247	ENSCPOG00000014680	CMSS1	100	89.247	Cavia_porcellus
ENSPPRG00000016767	CMSS1	100	92.857	ENSCCAG00000034685	CMSS1	100	92.857	Cebus_capucinus
ENSPPRG00000016767	CMSS1	100	92.115	ENSCATG00000031980	CMSS1	100	92.115	Cercocebus_atys
ENSPPRG00000016767	CMSS1	82	95.197	ENSCLAG00000011241	CMSS1	98	95.197	Chinchilla_lanigera
ENSPPRG00000016767	CMSS1	88	93.061	ENSCSAG00000006024	CMSS1	100	93.061	Chlorocebus_sabaeus
ENSPPRG00000016767	CMSS1	100	71.326	ENSCHOG00000012098	CMSS1	100	71.326	Choloepus_hoffmanni
ENSPPRG00000016767	CMSS1	80	39.565	ENSCING00000014848	-	100	41.711	Ciona_intestinalis
ENSPPRG00000016767	CMSS1	100	92.115	ENSCANG00000031337	CMSS1	100	92.115	Colobus_angolensis_palliatus
ENSPPRG00000016767	CMSS1	100	82.437	ENSCGRG00001014305	Cmss1	100	82.437	Cricetulus_griseus_chok1gshd
ENSPPRG00000016767	CMSS1	92	83.658	ENSCGRG00000006722	Cmss1	99	83.658	Cricetulus_griseus_crigri
ENSPPRG00000016767	CMSS1	100	51.852	ENSCSEG00000004958	cmss1	100	52.721	Cynoglossus_semilaevis
ENSPPRG00000016767	CMSS1	100	53.103	ENSCVAG00000005039	cmss1	100	53.633	Cyprinodon_variegatus
ENSPPRG00000016767	CMSS1	100	46.333	ENSDARG00000112579	cmss1	100	47.603	Danio_rerio
ENSPPRG00000016767	CMSS1	94	88.168	ENSDNOG00000040418	CMSS1	92	88.803	Dasypus_novemcinctus
ENSPPRG00000016767	CMSS1	100	91.756	ENSDORG00000010461	Cmss1	100	91.756	Dipodomys_ordii
ENSPPRG00000016767	CMSS1	82	94.298	ENSEASG00005010966	CMSS1	99	94.521	Equus_asinus_asinus
ENSPPRG00000016767	CMSS1	95	90.226	ENSECAG00000015662	CMSS1	99	92.920	Equus_caballus
ENSPPRG00000016767	CMSS1	100	56.989	ENSEEUG00000007624	-	100	56.989	Erinaceus_europaeus
ENSPPRG00000016767	CMSS1	100	50.333	ENSELUG00000019459	cmss1	100	52.000	Esox_lucius
ENSPPRG00000016767	CMSS1	100	98.925	ENSFCAG00000044577	CMSS1	100	98.925	Felis_catus
ENSPPRG00000016767	CMSS1	86	64.435	ENSFALG00000005816	CMSS1	100	64.435	Ficedula_albicollis
ENSPPRG00000016767	CMSS1	82	92.105	ENSFDAG00000012577	CMSS1	100	92.105	Fukomys_damarensis
ENSPPRG00000016767	CMSS1	81	62.338	ENSFHEG00000012008	cmss1	95	62.338	Fundulus_heteroclitus
ENSPPRG00000016767	CMSS1	99	52.465	ENSGMOG00000016729	cmss1	100	53.901	Gadus_morhua
ENSPPRG00000016767	CMSS1	96	63.433	ENSGALG00000015267	CMSS1	100	64.368	Gallus_gallus
ENSPPRG00000016767	CMSS1	74	64.251	ENSGAFG00000021217	cmss1	76	64.000	Gambusia_affinis
ENSPPRG00000016767	CMSS1	99	48.227	ENSGACG00000002798	cmss1	100	48.746	Gasterosteus_aculeatus
ENSPPRG00000016767	CMSS1	85	71.308	ENSGAGG00000019861	CMSS1	92	71.308	Gopherus_agassizii
ENSPPRG00000016767	CMSS1	92	92.636	ENSGGOG00000014125	CMSS1	99	92.636	Gorilla_gorilla
ENSPPRG00000016767	CMSS1	100	49.829	ENSHBUG00000008431	cmss1	100	50.690	Haplochromis_burtoni
ENSPPRG00000016767	CMSS1	91	88.538	ENSHGLG00000019481	CMSS1	100	88.538	Heterocephalus_glaber_female
ENSPPRG00000016767	CMSS1	92	88.327	ENSHGLG00100010314	CMSS1	100	88.327	Heterocephalus_glaber_male
ENSPPRG00000016767	CMSS1	100	52.542	ENSHCOG00000003222	cmss1	100	54.576	Hippocampus_comes
ENSPPRG00000016767	CMSS1	100	48.966	ENSIPUG00000011591	cmss1	100	49.315	Ictalurus_punctatus
ENSPPRG00000016767	CMSS1	100	92.473	ENSSTOG00000019366	CMSS1	100	92.473	Ictidomys_tridecemlineatus
ENSPPRG00000016767	CMSS1	100	86.738	ENSJJAG00000014894	Cmss1	100	86.738	Jaculus_jaculus
ENSPPRG00000016767	CMSS1	72	55.446	ENSKMAG00000002390	cmss1	80	55.000	Kryptolebias_marmoratus
ENSPPRG00000016767	CMSS1	79	53.333	ENSLBEG00000006298	cmss1	82	58.706	Labrus_bergylta
ENSPPRG00000016767	CMSS1	82	65.217	ENSLACG00000009293	CMSS1	100	65.217	Latimeria_chalumnae
ENSPPRG00000016767	CMSS1	100	51.590	ENSLOCG00000009391	cmss1	100	52.650	Lepisosteus_oculatus
ENSPPRG00000016767	CMSS1	82	92.105	ENSLAFG00000017509	CMSS1	100	92.105	Loxodonta_africana
ENSPPRG00000016767	CMSS1	100	92.832	ENSMFAG00000045006	CMSS1	100	92.832	Macaca_fascicularis
ENSPPRG00000016767	CMSS1	100	92.473	ENSMMUG00000002939	CMSS1	100	92.473	Macaca_mulatta
ENSPPRG00000016767	CMSS1	100	92.473	ENSMNEG00000031315	CMSS1	100	92.473	Macaca_nemestrina
ENSPPRG00000016767	CMSS1	100	92.115	ENSMLEG00000033660	CMSS1	100	92.115	Mandrillus_leucophaeus
ENSPPRG00000016767	CMSS1	100	53.401	ENSMAMG00000017176	cmss1	100	54.138	Mastacembelus_armatus
ENSPPRG00000016767	CMSS1	100	50.859	ENSMZEG00005021886	cmss1	100	51.546	Maylandia_zebra
ENSPPRG00000016767	CMSS1	82	68.860	ENSMGAG00000014360	CMSS1	100	68.860	Meleagris_gallopavo
ENSPPRG00000016767	CMSS1	100	61.649	ENSMAUG00000020609	Cmss1	100	61.131	Mesocricetus_auratus
ENSPPRG00000016767	CMSS1	100	92.473	ENSMICG00000048977	CMSS1	100	92.473	Microcebus_murinus
ENSPPRG00000016767	CMSS1	100	83.871	ENSMOCG00000021937	Cmss1	100	83.871	Microtus_ochrogaster
ENSPPRG00000016767	CMSS1	72	62.871	ENSMMOG00000019794	cmss1	83	62.500	Mola_mola
ENSPPRG00000016767	CMSS1	94	75.954	ENSMODG00000002275	CMSS1	98	75.954	Monodelphis_domestica
ENSPPRG00000016767	CMSS1	100	52.843	ENSMALG00000004250	cmss1	100	52.921	Monopterus_albus
ENSPPRG00000016767	CMSS1	100	83.929	MGP_CAROLIEiJ_G0020824	Cmss1	100	83.929	Mus_caroli
ENSPPRG00000016767	CMSS1	100	85.000	ENSMUSG00000022748	Cmss1	100	85.000	Mus_musculus
ENSPPRG00000016767	CMSS1	100	82.857	MGP_PahariEiJ_G0016524	Cmss1	100	82.857	Mus_pahari
ENSPPRG00000016767	CMSS1	100	84.286	MGP_SPRETEiJ_G0021724	Cmss1	100	84.286	Mus_spretus
ENSPPRG00000016767	CMSS1	92	96.498	ENSMPUG00000011324	CMSS1	99	96.498	Mustela_putorius_furo
ENSPPRG00000016767	CMSS1	92	93.462	ENSMLUG00000001131	CMSS1	99	93.462	Myotis_lucifugus
ENSPPRG00000016767	CMSS1	100	86.380	ENSNGAG00000020316	Cmss1	100	86.380	Nannospalax_galili
ENSPPRG00000016767	CMSS1	100	49.007	ENSNBRG00000003095	cmss1	100	51.546	Neolamprologus_brichardi
ENSPPRG00000016767	CMSS1	100	93.907	ENSNLEG00000034172	CMSS1	100	93.907	Nomascus_leucogenys
ENSPPRG00000016767	CMSS1	82	68.421	ENSMEUG00000014505	CMSS1	100	68.421	Notamacropus_eugenii
ENSPPRG00000016767	CMSS1	100	92.473	ENSOPRG00000002986	CMSS1	100	92.473	Ochotona_princeps
ENSPPRG00000016767	CMSS1	100	73.835	ENSODEG00000009446	-	100	73.835	Octodon_degus
ENSPPRG00000016767	CMSS1	100	89.606	ENSODEG00000005226	-	100	89.606	Octodon_degus
ENSPPRG00000016767	CMSS1	100	78.495	ENSODEG00000001853	-	100	78.495	Octodon_degus
ENSPPRG00000016767	CMSS1	100	84.342	ENSODEG00000003558	-	100	84.342	Octodon_degus
ENSPPRG00000016767	CMSS1	72	62.376	ENSONIG00000006678	cmss1	77	62.000	Oreochromis_niloticus
ENSPPRG00000016767	CMSS1	92	71.923	ENSOANG00000007529	CMSS1	100	74.678	Ornithorhynchus_anatinus
ENSPPRG00000016767	CMSS1	92	93.798	ENSOCUG00000025366	CMSS1	93	93.798	Oryctolagus_cuniculus
ENSPPRG00000016767	CMSS1	100	56.842	ENSORLG00000020340	cmss1	100	56.446	Oryzias_latipes
ENSPPRG00000016767	CMSS1	82	54.148	ENSORLG00020012235	cmss1	85	57.500	Oryzias_latipes_hni
ENSPPRG00000016767	CMSS1	72	57.921	ENSORLG00015015551	cmss1	75	57.500	Oryzias_latipes_hsok
ENSPPRG00000016767	CMSS1	100	54.671	ENSOMEG00000012555	cmss1	100	55.363	Oryzias_melastigma
ENSPPRG00000016767	CMSS1	82	93.421	ENSOGAG00000002045	CMSS1	100	93.421	Otolemur_garnettii
ENSPPRG00000016767	CMSS1	92	90.310	ENSOARG00000017899	CMSS1	89	90.310	Ovis_aries
ENSPPRG00000016767	CMSS1	92	93.023	ENSPPAG00000038515	CMSS1	95	93.023	Pan_paniscus
ENSPPRG00000016767	CMSS1	100	98.925	ENSPTIG00000018274	CMSS1	100	98.925	Panthera_tigris_altaica
ENSPPRG00000016767	CMSS1	100	92.115	ENSPTRG00000015157	CMSS1	100	92.653	Pan_troglodytes
ENSPPRG00000016767	CMSS1	92	89.922	ENSPANG00000019980	CMSS1	99	89.922	Papio_anubis
ENSPPRG00000016767	CMSS1	91	56.604	ENSPKIG00000012609	cmss1	97	57.576	Paramormyrops_kingsleyae
ENSPPRG00000016767	CMSS1	82	73.362	ENSPSIG00000003849	CMSS1	100	73.362	Pelodiscus_sinensis
ENSPPRG00000016767	CMSS1	72	62.562	ENSPMGG00000010286	cmss1	86	62.189	Periophthalmus_magnuspinnatus
ENSPPRG00000016767	CMSS1	100	84.643	ENSPEMG00000016384	Cmss1	100	84.643	Peromyscus_maniculatus_bairdii
ENSPPRG00000016767	CMSS1	73	53.431	ENSPMAG00000001146	cmss1	98	53.500	Petromyzon_marinus
ENSPPRG00000016767	CMSS1	92	75.769	ENSPCIG00000015656	CMSS1	98	75.769	Phascolarctos_cinereus
ENSPPRG00000016767	CMSS1	100	53.147	ENSPFOG00000016849	cmss1	100	54.861	Poecilia_formosa
ENSPPRG00000016767	CMSS1	100	52.797	ENSPLAG00000008323	cmss1	100	54.514	Poecilia_latipinna
ENSPPRG00000016767	CMSS1	100	53.633	ENSPMEG00000021020	cmss1	100	53.979	Poecilia_mexicana
ENSPPRG00000016767	CMSS1	92	55.939	ENSPREG00000007618	cmss1	88	55.939	Poecilia_reticulata
ENSPPRG00000016767	CMSS1	100	91.756	ENSPPYG00000013606	CMSS1	100	91.756	Pongo_abelii
ENSPPRG00000016767	CMSS1	100	92.832	ENSPCOG00000020035	CMSS1	100	92.832	Propithecus_coquereli
ENSPPRG00000016767	CMSS1	100	81.720	ENSPVAG00000017031	CMSS1	100	81.720	Pteropus_vampyrus
ENSPPRG00000016767	CMSS1	91	50.943	ENSPNYG00000013428	cmss1	97	51.698	Pundamilia_nyererei
ENSPPRG00000016767	CMSS1	100	49.175	ENSPNAG00000007912	cmss1	100	49.175	Pygocentrus_nattereri
ENSPPRG00000016767	CMSS1	92	82.625	ENSRNOG00000027888	Cmss1	99	82.625	Rattus_norvegicus
ENSPPRG00000016767	CMSS1	100	92.115	ENSRBIG00000037931	CMSS1	100	92.115	Rhinopithecus_bieti
ENSPPRG00000016767	CMSS1	100	92.115	ENSRROG00000042910	CMSS1	100	92.115	Rhinopithecus_roxellana
ENSPPRG00000016767	CMSS1	100	86.429	ENSSBOG00000030980	CMSS1	99	92.278	Saimiri_boliviensis_boliviensis
ENSPPRG00000016767	CMSS1	89	76.587	ENSSHAG00000009321	CMSS1	99	76.587	Sarcophilus_harrisii
ENSPPRG00000016767	CMSS1	100	54.422	ENSSFOG00015001509	cmss1	100	55.172	Scleropages_formosus
ENSPPRG00000016767	CMSS1	100	54.110	ENSSMAG00000001653	cmss1	100	53.952	Scophthalmus_maximus
ENSPPRG00000016767	CMSS1	100	53.952	ENSSDUG00000007719	cmss1	100	56.164	Seriola_dumerili
ENSPPRG00000016767	CMSS1	74	64.734	ENSSLDG00000012300	cmss1	98	52.083	Seriola_lalandi_dorsalis
ENSPPRG00000016767	CMSS1	100	76.071	ENSSARG00000003584	CMSS1	100	76.071	Sorex_araneus
ENSPPRG00000016767	CMSS1	81	71.239	ENSSPUG00000003865	CMSS1	100	71.239	Sphenodon_punctatus
ENSPPRG00000016767	CMSS1	74	65.049	ENSSPAG00000019182	cmss1	82	55.431	Stegastes_partitus
ENSPPRG00000016767	CMSS1	100	94.982	ENSSSCG00000011970	CMSS1	100	94.982	Sus_scrofa
ENSPPRG00000016767	CMSS1	82	65.939	ENSTGUG00000013635	CMSS1	100	65.939	Taeniopygia_guttata
ENSPPRG00000016767	CMSS1	100	51.761	ENSTRUG00000015265	cmss1	100	52.465	Takifugu_rubripes
ENSPPRG00000016767	CMSS1	72	56.436	ENSTNIG00000002880	cmss1	86	51.477	Tetraodon_nigroviridis
ENSPPRG00000016767	CMSS1	100	63.214	ENSTBEG00000016722	CMSS1	100	63.214	Tupaia_belangeri
ENSPPRG00000016767	CMSS1	100	91.039	ENSTTRG00000001562	CMSS1	100	91.039	Tursiops_truncatus
ENSPPRG00000016767	CMSS1	97	92.336	ENSUAMG00000024209	CMSS1	100	97.758	Ursus_americanus
ENSPPRG00000016767	CMSS1	93	94.981	ENSUMAG00000001983	CMSS1	99	94.574	Ursus_maritimus
ENSPPRG00000016767	CMSS1	100	69.892	ENSVPAG00000000263	CMSS1	100	69.892	Vicugna_pacos
ENSPPRG00000016767	CMSS1	78	95.853	ENSVVUG00000007776	-	85	95.853	Vulpes_vulpes
ENSPPRG00000016767	CMSS1	88	94.715	ENSVVUG00000021647	-	100	94.715	Vulpes_vulpes
ENSPPRG00000016767	CMSS1	100	56.690	ENSXETG00000011858	cmss1	100	56.690	Xenopus_tropicalis
ENSPPRG00000016767	CMSS1	75	63.462	ENSXCOG00000018724	cmss1	68	63.500	Xiphophorus_couchianus
ENSPPRG00000016767	CMSS1	75	63.462	ENSXMAG00000011243	cmss1	75	63.500	Xiphophorus_maculatus