EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000016784 (Gene tree)
Gene ID: 109251453
Gene Symbol: RBM42
Alias: -
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 8865 bases
Position: chrKV860365.1:6816805-6825669
Accession: 109251453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000026110	RRM_1	PF00076.22	5.8e-18	1	1
ENSPPRP00000026163	RRM_1	PF00076.22	6.4e-18	1	1
ENSPPRP00000026125	RRM_1	PF00076.22	6.9e-18	1	1
ENSPPRP00000026086	RRM_1	PF00076.22	5.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000025737	RBM42-202	1152	-	ENSPPRP00000026107	383 (aa)	-	UPI000DE7D3AB
ENSPPRT00000025740	RBM42-203	1272	-	ENSPPRP00000026110	423 (aa)	-	UPI000DE7DCC9
ENSPPRT00000025693	RBM42-201	546	-	ENSPPRP00000026086	181 (aa)	-	UPI000DE7EF6B
ENSPPRT00000025840	RBM42-205	1476	XM_019423140	ENSPPRP00000026163	455 (aa)	XP_019278685	UPI0003F1AE05
ENSPPRT00000025776	RBM42-204	1567	XM_019423137	ENSPPRP00000026125	477 (aa)	XP_019278682	UPI00029900E8

Gene Model

Click here to download ENSPPRG00000016784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000016784's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000016784	RBM42	100	100.000	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSPPRG00000016784	RBM42	100	100.000	ENSAMEG00000000524	RBM42	100	98.956	Ailuropoda_melanoleuca
ENSPPRG00000016784	RBM42	85	95.775	ENSACAG00000005495	RBM42	72	93.333	Anolis_carolinensis
ENSPPRG00000016784	RBM42	100	100.000	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSPPRG00000016784	RBM42	100	100.000	ENSBTAG00000013440	RBM42	100	98.681	Bos_taurus
ENSPPRG00000016784	RBM42	100	100.000	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSPPRG00000016784	RBM42	100	100.000	ENSCAFG00020018628	RBM42	100	97.826	Canis_lupus_dingo
ENSPPRG00000016784	RBM42	100	100.000	ENSCHIG00000009518	RBM42	100	97.694	Capra_hircus
ENSPPRG00000016784	RBM42	100	100.000	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSPPRG00000016784	RBM42	81	97.927	ENSCAPG00000009566	RBM42	99	97.927	Cavia_aperea
ENSPPRG00000016784	RBM42	100	100.000	ENSCPOG00000012365	RBM42	99	97.904	Cavia_porcellus
ENSPPRG00000016784	RBM42	100	100.000	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSPPRG00000016784	RBM42	100	100.000	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSPPRG00000016784	RBM42	100	100.000	ENSCLAG00000012865	RBM42	99	97.694	Chinchilla_lanigera
ENSPPRG00000016784	RBM42	100	100.000	ENSCSAG00000004422	RBM42	100	96.288	Chlorocebus_sabaeus
ENSPPRG00000016784	RBM42	100	88.050	ENSCANG00000030272	RBM42	100	88.050	Colobus_angolensis_palliatus
ENSPPRG00000016784	RBM42	100	100.000	ENSCGRG00001018540	Rbm42	99	97.484	Cricetulus_griseus_chok1gshd
ENSPPRG00000016784	RBM42	100	100.000	ENSDNOG00000037397	RBM42	100	97.083	Dasypus_novemcinctus
ENSPPRG00000016784	RBM42	100	97.065	ENSDORG00000013001	Rbm42	99	97.065	Dipodomys_ordii
ENSPPRG00000016784	RBM42	93	92.754	ENSETEG00000007878	RBM42	74	92.754	Echinops_telfairi
ENSPPRG00000016784	RBM42	100	100.000	ENSEASG00005001074	RBM42	100	97.143	Equus_asinus_asinus
ENSPPRG00000016784	RBM42	100	100.000	ENSECAG00000018215	RBM42	100	97.143	Equus_caballus
ENSPPRG00000016784	RBM42	100	100.000	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSPPRG00000016784	RBM42	100	100.000	ENSFDAG00000007440	RBM42	99	96.660	Fukomys_damarensis
ENSPPRG00000016784	RBM42	73	97.183	ENSGAGG00000014805	RBM42	64	92.086	Gopherus_agassizii
ENSPPRG00000016784	RBM42	100	100.000	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSPPRG00000016784	RBM42	96	100.000	ENSHGLG00000008418	RBM42	99	95.807	Heterocephalus_glaber_female
ENSPPRG00000016784	RBM42	96	100.000	ENSHGLG00100018667	RBM42	99	95.807	Heterocephalus_glaber_male
ENSPPRG00000016784	RBM42	100	100.000	ENSSTOG00000013050	RBM42	100	97.065	Ictidomys_tridecemlineatus
ENSPPRG00000016784	RBM42	100	100.000	ENSJJAG00000010421	Rbm42	99	96.646	Jaculus_jaculus
ENSPPRG00000016784	RBM42	100	95.807	ENSLAFG00000014993	RBM42	99	95.807	Loxodonta_africana
ENSPPRG00000016784	RBM42	100	100.000	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSPPRG00000016784	RBM42	100	100.000	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSPPRG00000016784	RBM42	100	100.000	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSPPRG00000016784	RBM42	100	100.000	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSPPRG00000016784	RBM42	100	100.000	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSPPRG00000016784	RBM42	100	100.000	ENSMOCG00000000405	Rbm42	99	97.694	Microtus_ochrogaster
ENSPPRG00000016784	RBM42	83	100.000	ENSMODG00000013957	RBM42	83	84.583	Monodelphis_domestica
ENSPPRG00000016784	RBM42	100	100.000	MGP_CAROLIEiJ_G0029536	Rbm42	99	97.275	Mus_caroli
ENSPPRG00000016784	RBM42	100	100.000	ENSMUSG00000036733	Rbm42	99	97.275	Mus_musculus
ENSPPRG00000016784	RBM42	100	100.000	MGP_PahariEiJ_G0012770	Rbm42	99	97.694	Mus_pahari
ENSPPRG00000016784	RBM42	100	100.000	MGP_SPRETEiJ_G0030632	Rbm42	99	97.275	Mus_spretus
ENSPPRG00000016784	RBM42	100	100.000	ENSMPUG00000006288	RBM42	100	98.242	Mustela_putorius_furo
ENSPPRG00000016784	RBM42	100	100.000	ENSMLUG00000011334	RBM42	100	97.694	Myotis_lucifugus
ENSPPRG00000016784	RBM42	100	100.000	ENSNGAG00000019698	Rbm42	99	97.065	Nannospalax_galili
ENSPPRG00000016784	RBM42	71	99.007	ENSNLEG00000011272	-	94	91.341	Nomascus_leucogenys
ENSPPRG00000016784	RBM42	90	100.000	ENSMEUG00000016300	RBM42	100	84.200	Notamacropus_eugenii
ENSPPRG00000016784	RBM42	100	100.000	ENSOPRG00000001229	RBM42	100	89.937	Ochotona_princeps
ENSPPRG00000016784	RBM42	100	100.000	ENSODEG00000013705	RBM42	99	97.484	Octodon_degus
ENSPPRG00000016784	RBM42	100	100.000	ENSOCUG00000003337	RBM42	100	95.852	Oryctolagus_cuniculus
ENSPPRG00000016784	RBM42	100	100.000	ENSOGAG00000004144	RBM42	100	97.275	Otolemur_garnettii
ENSPPRG00000016784	RBM42	99	100.000	ENSOARG00000004926	RBM42	98	93.697	Ovis_aries
ENSPPRG00000016784	RBM42	100	100.000	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSPPRG00000016784	RBM42	100	100.000	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSPPRG00000016784	RBM42	100	100.000	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSPPRG00000016784	RBM42	100	100.000	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSPPRG00000016784	RBM42	100	100.000	ENSPEMG00000012065	Rbm42	99	97.904	Peromyscus_maniculatus_bairdii
ENSPPRG00000016784	RBM42	100	100.000	ENSPCIG00000015737	RBM42	100	84.792	Phascolarctos_cinereus
ENSPPRG00000016784	RBM42	100	100.000	ENSPPYG00000009871	RBM42	100	97.113	Pongo_abelii
ENSPPRG00000016784	RBM42	90	100.000	ENSPCAG00000013053	RBM42	100	82.809	Procavia_capensis
ENSPPRG00000016784	RBM42	100	100.000	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSPPRG00000016784	RBM42	97	76.279	ENSPCOG00000020672	RBM42	81	99.099	Propithecus_coquereli
ENSPPRG00000016784	RBM42	100	100.000	ENSPVAG00000012815	RBM42	100	98.742	Pteropus_vampyrus
ENSPPRG00000016784	RBM42	100	100.000	ENSRNOG00000024278	Rbm42	99	97.484	Rattus_norvegicus
ENSPPRG00000016784	RBM42	100	100.000	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSPPRG00000016784	RBM42	100	100.000	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSPPRG00000016784	RBM42	90	98.421	ENSSBOG00000030666	RBM42	100	98.768	Saimiri_boliviensis_boliviensis
ENSPPRG00000016784	RBM42	100	87.500	ENSSARG00000010724	RBM42	100	87.500	Sorex_araneus
ENSPPRG00000016784	RBM42	100	100.000	ENSSSCG00000002905	RBM42	100	97.636	Sus_scrofa
ENSPPRG00000016784	RBM42	100	100.000	ENSUAMG00000020711	RBM42	100	99.161	Ursus_americanus
ENSPPRG00000016784	RBM42	100	100.000	ENSUMAG00000020223	RBM42	100	99.161	Ursus_maritimus
ENSPPRG00000016784	RBM42	100	100.000	ENSVVUG00000015117	RBM42	100	97.694	Vulpes_vulpes