EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPPRG00000016790 (Gene tree)
Gene ID
109268842
Gene Symbol
CPSF3
Alias
-
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Panthera_pardus
Status
putative
Strand
Minus strand
Length
40589 bases
Position
chrKV860272.1:78242972-78283560
Accession
109268842
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPPRP00000026216CPSF73-100_CPF11718.82e-5511
ENSPPRP00000026209CPSF73-100_CPF11718.82.2e-5511
ENSPPRP00000026216Beta-CaspPF10996.84.6e-3411
ENSPPRP00000026209Beta-CaspPF10996.85.1e-3411
ENSPPRP00000026209Lactamase_BPF00753.271.2e-1811
ENSPPRP00000026216Lactamase_BPF00753.272.6e-1511
ENSPPRP00000026216RMMBLPF07521.121.5e-2111
ENSPPRP00000026209RMMBLPF07521.121.6e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPPRT00000025898CPSF3-2013176XM_019452492ENSPPRP00000026216647 (aa)XP_019308037UPI0007663682
ENSPPRT00000025912CPSF3-2022420XM_019452483ENSPPRP00000026209684 (aa)XP_019308028UPI0009052D61
Gene Model
Click here to download ENSPPRG00000016790's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000016790's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPPRG00000016790CPSF35654.054ENSPPRG00000021402INTS117654.054
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPPRG00000016790CPSF310099.269ENSG00000119203CPSF3100100.000Homo_sapiens
ENSPPRG00000016790CPSF39985.567ENSAPOG00000022087cpsf39885.420Acanthochromis_polyacanthus
ENSPPRG00000016790CPSF37396.994ENSAPOG00000012241CPSF39096.982Acanthochromis_polyacanthus
ENSPPRG00000016790CPSF310099.561ENSAMEG00000008493CPSF310099.561Ailuropoda_melanoleuca
ENSPPRG00000016790CPSF39783.121ENSACIG00000009846cpsf39982.962Amphilophus_citrinellus
ENSPPRG00000016790CPSF39786.825ENSACIG00000023663CPSF39986.825Amphilophus_citrinellus
ENSPPRG00000016790CPSF39988.235ENSAOCG00000010077CPSF39888.235Amphiprion_ocellaris
ENSPPRG00000016790CPSF39985.567ENSAOCG00000022056cpsf39491.156Amphiprion_ocellaris
ENSPPRG00000016790CPSF39988.235ENSAPEG00000021167CPSF39888.235Amphiprion_percula
ENSPPRG00000016790CPSF39985.714ENSAPEG00000019526cpsf39786.728Amphiprion_percula
ENSPPRG00000016790CPSF39985.714ENSATEG00000003959cpsf39885.567Anabas_testudineus
ENSPPRG00000016790CPSF39983.529ENSATEG00000014525CPSF39883.529Anabas_testudineus
ENSPPRG00000016790CPSF310095.518ENSAPLG00000006941CPSF39895.238Anas_platyrhynchos
ENSPPRG00000016790CPSF39892.441ENSACAG00000001759CPSF310091.981Anolis_carolinensis
ENSPPRG00000016790CPSF310092.890ENSANAG00000031254CPSF310092.690Aotus_nancymaae
ENSPPRG00000016790CPSF39786.667ENSACLG00000018846CPSF39986.667Astatotilapia_calliptera
ENSPPRG00000016790CPSF39985.581ENSACLG00000014484cpsf39985.865Astatotilapia_calliptera
ENSPPRG00000016790CPSF39988.088ENSAMXG00000004786cpsf39888.088Astyanax_mexicanus
ENSPPRG00000016790CPSF310099.708ENSBTAG00000019735CPSF310099.708Bos_taurus
ENSPPRG00000016790CPSF39159.370WBGene00013460cpsf-38959.213Caenorhabditis_elegans
ENSPPRG00000016790CPSF310098.977ENSCJAG00000006276CPSF310098.977Callithrix_jacchus
ENSPPRG00000016790CPSF310099.561ENSCAFG00000003375CPSF39599.561Canis_familiaris
ENSPPRG00000016790CPSF390100.000ENSCAFG00020026799CPSF3100100.000Canis_lupus_dingo
ENSPPRG00000016790CPSF310099.708ENSCHIG00000013973CPSF310099.708Capra_hircus
ENSPPRG00000016790CPSF310099.269ENSTSYG00000002967CPSF310099.269Carlito_syrichta
ENSPPRG00000016790CPSF310097.682ENSCAPG00000013851CPSF310097.751Cavia_aperea
ENSPPRG00000016790CPSF310097.807ENSCPOG00000011299CPSF310097.807Cavia_porcellus
ENSPPRG00000016790CPSF310099.123ENSCCAG00000036730CPSF310099.123Cebus_capucinus
ENSPPRG00000016790CPSF310096.642ENSCATG00000014770CPSF399100.000Cercocebus_atys
ENSPPRG00000016790CPSF310097.368ENSCLAG00000002727CPSF310097.368Chinchilla_lanigera
ENSPPRG00000016790CPSF310091.520ENSCSAG00000007125CPSF310091.520Chlorocebus_sabaeus
ENSPPRG00000016790CPSF386100.000ENSCHOG00000000180CPSF38571.930Choloepus_hoffmanni
ENSPPRG00000016790CPSF39995.666ENSCPBG00000014074CPSF39995.601Chrysemys_picta_bellii
ENSPPRG00000016790CPSF39968.098ENSCING00000007214-9867.883Ciona_intestinalis
ENSPPRG00000016790CPSF310086.111ENSCANG00000034435CPSF310086.111Colobus_angolensis_palliatus
ENSPPRG00000016790CPSF310098.684ENSCGRG00001013134Cpsf310098.684Cricetulus_griseus_chok1gshd
ENSPPRG00000016790CPSF310098.684ENSCGRG00000018319Cpsf310098.684Cricetulus_griseus_crigri
ENSPPRG00000016790CPSF39986.931ENSCSEG00000002021CPSF39986.399Cynoglossus_semilaevis
ENSPPRG00000016790CPSF39988.529ENSCVAG00000015067CPSF39888.529Cyprinodon_variegatus
ENSPPRG00000016790CPSF39989.118ENSDARG00000027649cpsf39889.118Danio_rerio
ENSPPRG00000016790CPSF310097.840ENSDNOG00000008940CPSF39597.810Dasypus_novemcinctus
ENSPPRG00000016790CPSF39599.078ENSDORG00000014263Cpsf310099.078Dipodomys_ordii
ENSPPRG00000016790CPSF39967.452FBgn0261065Cpsf739867.305Drosophila_melanogaster
ENSPPRG00000016790CPSF39588.254ENSETEG00000003893CPSF310085.714Echinops_telfairi
ENSPPRG00000016790CPSF39978.653ENSEBUG00000009018cpsf39878.367Eptatretus_burgeri
ENSPPRG00000016790CPSF310099.561ENSEASG00005003970CPSF310099.561Equus_asinus_asinus
ENSPPRG00000016790CPSF310099.561ENSECAG00000019911CPSF310099.561Equus_caballus
ENSPPRG00000016790CPSF310083.772ENSEEUG00000015422CPSF310083.772Erinaceus_europaeus
ENSPPRG00000016790CPSF39988.235ENSELUG00000013775cpsf39888.235Esox_lucius
ENSPPRG00000016790CPSF310099.708ENSFCAG00000007852CPSF310099.708Felis_catus
ENSPPRG00000016790CPSF310095.054ENSFALG00000006572CPSF310095.054Ficedula_albicollis
ENSPPRG00000016790CPSF39997.214ENSFDAG00000006317CPSF39997.214Fukomys_damarensis
ENSPPRG00000016790CPSF36368.537ENSFHEG00000012186CPSF39968.537Fundulus_heteroclitus
ENSPPRG00000016790CPSF39985.125ENSFHEG00000014774cpsf39884.978Fundulus_heteroclitus
ENSPPRG00000016790CPSF39986.471ENSGMOG00000003157cpsf39886.176Gadus_morhua
ENSPPRG00000016790CPSF310094.590ENSGALG00000016424CPSF39994.860Gallus_gallus
ENSPPRG00000016790CPSF39988.365ENSGAFG00000008016CPSF39888.365Gambusia_affinis
ENSPPRG00000016790CPSF39782.989ENSGAFG00000019449cpsf39982.830Gambusia_affinis
ENSPPRG00000016790CPSF37293.576ENSGAGG00000025583CPSF39393.576Gopherus_agassizii
ENSPPRG00000016790CPSF39899.370ENSGGOG00000001757CPSF310099.370Gorilla_gorilla
ENSPPRG00000016790CPSF39985.903ENSHBUG00000001188cpsf39985.756Haplochromis_burtoni
ENSPPRG00000016790CPSF36381.975ENSHBUG00000014332CPSF39981.975Haplochromis_burtoni
ENSPPRG00000016790CPSF310096.637ENSHGLG00000000666CPSF39996.637Heterocephalus_glaber_female
ENSPPRG00000016790CPSF310096.637ENSHGLG00100007765CPSF39996.637Heterocephalus_glaber_male
ENSPPRG00000016790CPSF39985.044ENSHCOG00000007251cpsf39984.897Hippocampus_comes
ENSPPRG00000016790CPSF39986.471ENSHCOG00000015957CPSF39786.471Hippocampus_comes
ENSPPRG00000016790CPSF39986.912ENSIPUG00000023488cpsf39886.912Ictalurus_punctatus
ENSPPRG00000016790CPSF310098.977ENSSTOG00000004476CPSF310098.977Ictidomys_tridecemlineatus
ENSPPRG00000016790CPSF310097.682ENSJJAG00000023415Cpsf310097.661Jaculus_jaculus
ENSPPRG00000016790CPSF39984.853ENSKMAG00000002806cpsf39884.831Kryptolebias_marmoratus
ENSPPRG00000016790CPSF39987.794ENSKMAG00000007317CPSF39887.794Kryptolebias_marmoratus
ENSPPRG00000016790CPSF39979.442ENSLBEG00000020569cpsf39478.792Labrus_bergylta
ENSPPRG00000016790CPSF39589.352ENSLBEG00000013492CPSF39889.352Labrus_bergylta
ENSPPRG00000016790CPSF35880.161ENSLBEG00000015018-9980.161Labrus_bergylta
ENSPPRG00000016790CPSF39983.505ENSLACG00000008308CPSF39883.505Latimeria_chalumnae
ENSPPRG00000016790CPSF39989.280ENSLOCG00000016823cpsf39889.280Lepisosteus_oculatus
ENSPPRG00000016790CPSF310099.073ENSLAFG00000009467CPSF310097.794Loxodonta_africana
ENSPPRG00000016790CPSF310099.269ENSMFAG00000001339CPSF310099.269Macaca_fascicularis
ENSPPRG00000016790CPSF310099.227ENSMMUG00000018038CPSF310099.227Macaca_mulatta
ENSPPRG00000016790CPSF310087.944ENSMNEG00000039447CPSF310086.550Macaca_nemestrina
ENSPPRG00000016790CPSF310099.415ENSMLEG00000026825CPSF310099.415Mandrillus_leucophaeus
ENSPPRG00000016790CPSF39785.443ENSMAMG00000008835CPSF39985.443Mastacembelus_armatus
ENSPPRG00000016790CPSF39986.009ENSMAMG00000003076cpsf39885.862Mastacembelus_armatus
ENSPPRG00000016790CPSF39988.824ENSMZEG00005006258CPSF39888.824Maylandia_zebra
ENSPPRG00000016790CPSF39985.903ENSMZEG00005014358cpsf39985.756Maylandia_zebra
ENSPPRG00000016790CPSF310094.745ENSMGAG00000013995CPSF310094.903Meleagris_gallopavo
ENSPPRG00000016790CPSF35896.809ENSMAUG00000000166Cpsf310096.809Mesocricetus_auratus
ENSPPRG00000016790CPSF310093.713ENSMICG00000002363CPSF310093.713Microcebus_murinus
ENSPPRG00000016790CPSF310094.006ENSMOCG00000020067Cpsf310094.006Microtus_ochrogaster
ENSPPRG00000016790CPSF39982.326ENSMMOG00000018212CPSF39882.171Mola_mola
ENSPPRG00000016790CPSF37777.857ENSMMOG00000011923CPSF38477.857Mola_mola
ENSPPRG00000016790CPSF310096.093ENSMODG00000014703CPSF310096.093Monodelphis_domestica
ENSPPRG00000016790CPSF39883.438ENSMALG00000011474CPSF39983.594Monopterus_albus
ENSPPRG00000016790CPSF39986.197ENSMALG00000016416cpsf39986.050Monopterus_albus
ENSPPRG00000016790CPSF310098.392MGP_CAROLIEiJ_G0017640Cpsf310098.392Mus_caroli
ENSPPRG00000016790CPSF310098.392ENSMUSG00000054309Cpsf310098.392Mus_musculus
ENSPPRG00000016790CPSF310098.246MGP_PahariEiJ_G0029397Cpsf310098.246Mus_pahari
ENSPPRG00000016790CPSF310098.392MGP_SPRETEiJ_G0018481Cpsf310098.392Mus_spretus
ENSPPRG00000016790CPSF310098.977ENSMPUG00000013213CPSF310098.977Mustela_putorius_furo
ENSPPRG00000016790CPSF310098.394ENSMLUG00000010636CPSF310098.394Myotis_lucifugus
ENSPPRG00000016790CPSF310098.538ENSNGAG00000019836Cpsf310098.538Nannospalax_galili
ENSPPRG00000016790CPSF39786.667ENSNBRG00000010525CPSF39986.667Neolamprologus_brichardi
ENSPPRG00000016790CPSF39985.463ENSNBRG00000004770cpsf39985.316Neolamprologus_brichardi
ENSPPRG00000016790CPSF310099.269ENSNLEG00000013359CPSF310099.269Nomascus_leucogenys
ENSPPRG00000016790CPSF39966.718ENSMEUG00000013117-10065.497Notamacropus_eugenii
ENSPPRG00000016790CPSF310089.766ENSOPRG00000008902CPSF310089.766Ochotona_princeps
ENSPPRG00000016790CPSF310096.930ENSODEG00000003129CPSF310096.930Octodon_degus
ENSPPRG00000016790CPSF39986.050ENSONIG00000018812cpsf39985.903Oreochromis_niloticus
ENSPPRG00000016790CPSF38796.454ENSOANG00000008577CPSF310096.454Ornithorhynchus_anatinus
ENSPPRG00000016790CPSF310099.123ENSOCUG00000003728CPSF310099.123Oryctolagus_cuniculus
ENSPPRG00000016790CPSF39983.847ENSORLG00000018854cpsf39983.700Oryzias_latipes
ENSPPRG00000016790CPSF39983.700ENSORLG00020013331cpsf39983.554Oryzias_latipes_hni
ENSPPRG00000016790CPSF39983.847ENSORLG00015011017cpsf39983.700Oryzias_latipes_hsok
ENSPPRG00000016790CPSF39983.700ENSOMEG00000010647cpsf39483.554Oryzias_melastigma
ENSPPRG00000016790CPSF310089.181ENSOGAG00000001680CPSF310089.181Otolemur_garnettii
ENSPPRG00000016790CPSF310099.708ENSOARG00000015073CPSF310099.708Ovis_aries
ENSPPRG00000016790CPSF310099.415ENSPPAG00000042457CPSF310099.415Pan_paniscus
ENSPPRG00000016790CPSF3100100.000ENSPTIG00000003920CPSF3100100.000Panthera_tigris_altaica
ENSPPRG00000016790CPSF310099.415ENSPTRG00000011638CPSF310099.415Pan_troglodytes
ENSPPRG00000016790CPSF310099.123ENSPANG00000016798CPSF310099.123Papio_anubis
ENSPPRG00000016790CPSF39989.706ENSPKIG00000023646cpsf39989.457Paramormyrops_kingsleyae
ENSPPRG00000016790CPSF310094.590ENSPSIG00000016144CPSF310093.851Pelodiscus_sinensis
ENSPPRG00000016790CPSF38785.340ENSPMGG00000006141-9587.500Periophthalmus_magnuspinnatus
ENSPPRG00000016790CPSF36379.506ENSPMGG00000015311CPSF39979.506Periophthalmus_magnuspinnatus
ENSPPRG00000016790CPSF310098.392ENSPEMG00000017668Cpsf310098.392Peromyscus_maniculatus_bairdii
ENSPPRG00000016790CPSF37890.317ENSPMAG00000004841cpsf39990.317Petromyzon_marinus
ENSPPRG00000016790CPSF310097.836ENSPCIG00000009823CPSF39898.160Phascolarctos_cinereus
ENSPPRG00000016790CPSF39988.071ENSPFOG00000010418-9888.071Poecilia_formosa
ENSPPRG00000016790CPSF39984.897ENSPFOG00000015922cpsf39984.751Poecilia_formosa
ENSPPRG00000016790CPSF39984.897ENSPLAG00000000882cpsf39984.751Poecilia_latipinna
ENSPPRG00000016790CPSF36281.188ENSPLAG00000021300-9981.188Poecilia_latipinna
ENSPPRG00000016790CPSF39985.044ENSPMEG00000018309cpsf39984.897Poecilia_mexicana
ENSPPRG00000016790CPSF39881.918ENSPREG00000014875cpsf39982.353Poecilia_reticulata
ENSPPRG00000016790CPSF39982.769ENSPREG00000004482CPSF39882.647Poecilia_reticulata
ENSPPRG00000016790CPSF310094.883ENSPPYG00000012666CPSF310094.883Pongo_abelii
ENSPPRG00000016790CPSF39565.416ENSPCAG00000015042CPSF310064.209Procavia_capensis
ENSPPRG00000016790CPSF38892.199ENSPCOG00000023016CPSF39892.199Propithecus_coquereli
ENSPPRG00000016790CPSF39999.267ENSPVAG00000005324CPSF39999.267Pteropus_vampyrus
ENSPPRG00000016790CPSF39985.903ENSPNYG00000004405cpsf39985.756Pundamilia_nyererei
ENSPPRG00000016790CPSF38491.529ENSPNYG00000021047CPSF39191.529Pundamilia_nyererei
ENSPPRG00000016790CPSF39987.353ENSPNAG00000023060cpsf39887.353Pygocentrus_nattereri
ENSPPRG00000016790CPSF39998.387ENSRNOG00000052418Cpsf39998.387Rattus_norvegicus
ENSPPRG00000016790CPSF310094.745ENSRBIG00000041615CPSF39994.745Rhinopithecus_bieti
ENSPPRG00000016790CPSF310099.415ENSRROG00000033792CPSF310099.415Rhinopithecus_roxellana
ENSPPRG00000016790CPSF39640.331YLR277CYSH18443.531Saccharomyces_cerevisiae
ENSPPRG00000016790CPSF310094.624ENSSBOG00000027263CPSF310093.043Saimiri_boliviensis_boliviensis
ENSPPRG00000016790CPSF310097.807ENSSHAG00000007024CPSF310097.807Sarcophilus_harrisii
ENSPPRG00000016790CPSF39989.427ENSSFOG00015002108cpsf39989.427Scleropages_formosus
ENSPPRG00000016790CPSF39587.963ENSSMAG00000020534CPSF39587.963Scophthalmus_maximus
ENSPPRG00000016790CPSF39986.050ENSSDUG00000002828cpsf39685.903Seriola_dumerili
ENSPPRG00000016790CPSF39988.382ENSSDUG00000018498CPSF39888.382Seriola_dumerili
ENSPPRG00000016790CPSF39985.756ENSSLDG00000008469cpsf39190.847Seriola_lalandi_dorsalis
ENSPPRG00000016790CPSF39988.382ENSSLDG00000005234CPSF39888.382Seriola_lalandi_dorsalis
ENSPPRG00000016790CPSF310081.433ENSSARG00000005186CPSF310081.433Sorex_araneus
ENSPPRG00000016790CPSF310092.473ENSSPUG00000015525CPSF39792.697Sphenodon_punctatus
ENSPPRG00000016790CPSF39985.714ENSSPAG00000018579cpsf39885.567Stegastes_partitus
ENSPPRG00000016790CPSF39988.088ENSSPAG00000002906CPSF39888.088Stegastes_partitus
ENSPPRG00000016790CPSF39999.414ENSSSCG00000020799CPSF39999.414Sus_scrofa
ENSPPRG00000016790CPSF310094.900ENSTGUG00000013016CPSF39995.154Taeniopygia_guttata
ENSPPRG00000016790CPSF36272.727ENSTRUG00000013905CPSF39972.346Takifugu_rubripes
ENSPPRG00000016790CPSF39985.147ENSTRUG00000007030cpsf39785.147Takifugu_rubripes
ENSPPRG00000016790CPSF38593.699ENSTBEG00000002707CPSF38593.699Tupaia_belangeri
ENSPPRG00000016790CPSF38898.925ENSTTRG00000000861CPSF38898.925Tursiops_truncatus
ENSPPRG00000016790CPSF39996.774ENSUAMG00000007535CPSF39896.774Ursus_americanus
ENSPPRG00000016790CPSF310099.536ENSUMAG00000003676CPSF310099.536Ursus_maritimus
ENSPPRG00000016790CPSF39596.091ENSVPAG00000008041CPSF310096.215Vicugna_pacos
ENSPPRG00000016790CPSF310099.561ENSVVUG00000002194CPSF310099.561Vulpes_vulpes
ENSPPRG00000016790CPSF39990.015ENSXETG00000008263cpsf39890.015Xenopus_tropicalis
ENSPPRG00000016790CPSF39985.191ENSXCOG00000019695cpsf39985.044Xiphophorus_couchianus
ENSPPRG00000016790CPSF35779.784ENSXCOG00000000957-8779.784Xiphophorus_couchianus
ENSPPRG00000016790CPSF39988.218ENSXMAG00000027291CPSF39888.218Xiphophorus_maculatus
ENSPPRG00000016790CPSF39984.897ENSXMAG00000009784cpsf39984.751Xiphophorus_maculatus

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