EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000017524 (Gene tree)
Gene ID: 109252050
Gene Symbol: APTX
Alias: -
Full Name: aprataxin
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 68979 bases
Position: chrKV860369.1:1405877-1474855
Accession: 109252050
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000026360	DcpS_C	PF11969.8	8.4e-35	1	1
ENSPPRP00000026389	DcpS_C	PF11969.8	8.9e-35	1	1
ENSPPRP00000026442	DcpS_C	PF11969.8	1e-34	1	1
ENSPPRP00000026372	DcpS_C	PF11969.8	3.8e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000026222	APTX-201	921	-	ENSPPRP00000026360	306 (aa)	-	-
ENSPPRT00000026379	APTX-204	1726	XM_019424174	ENSPPRP00000026442	342 (aa)	XP_019279719	UPI00042C0311
ENSPPRT00000026282	APTX-203	1119	XM_019424177	ENSPPRP00000026389	302 (aa)	XP_019279722	UPI000DE7DD65
ENSPPRT00000026239	APTX-202	1011	-	ENSPPRP00000026372	336 (aa)	-	-

Gene Model

Click here to download ENSPPRG00000017524's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000017524's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000017524	APTX	56	30.645	ENSPPRG00000010790	HINT3	98	30.645

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000017524	APTX	99	92.647	ENSG00000137074	APTX	99	92.647	Homo_sapiens
ENSPPRG00000017524	APTX	99	61.877	ENSAPOG00000008785	aptx	100	61.877	Acanthochromis_polyacanthus
ENSPPRG00000017524	APTX	100	94.152	ENSAMEG00000007648	APTX	96	94.152	Ailuropoda_melanoleuca
ENSPPRG00000017524	APTX	99	58.480	ENSACIG00000002035	aptx	100	60.372	Amphilophus_citrinellus
ENSPPRG00000017524	APTX	99	61.877	ENSAOCG00000000634	aptx	100	61.877	Amphiprion_ocellaris
ENSPPRG00000017524	APTX	99	61.877	ENSAPEG00000017253	aptx	100	61.877	Amphiprion_percula
ENSPPRG00000017524	APTX	99	59.312	ENSATEG00000017383	aptx	100	59.312	Anabas_testudineus
ENSPPRG00000017524	APTX	90	60.870	ENSAPLG00000015645	APTX	100	60.870	Anas_platyrhynchos
ENSPPRG00000017524	APTX	99	62.391	ENSACAG00000003581	APTX	95	62.391	Anolis_carolinensis
ENSPPRG00000017524	APTX	99	90.588	ENSANAG00000030160	APTX	99	88.487	Aotus_nancymaae
ENSPPRG00000017524	APTX	99	61.765	ENSACLG00000018887	aptx	100	61.765	Astatotilapia_calliptera
ENSPPRG00000017524	APTX	99	59.412	ENSAMXG00000039899	aptx	99	59.412	Astyanax_mexicanus
ENSPPRG00000017524	APTX	100	89.181	ENSBTAG00000013947	APTX	99	89.181	Bos_taurus
ENSPPRG00000017524	APTX	99	89.118	ENSCJAG00000007940	APTX	99	89.118	Callithrix_jacchus
ENSPPRG00000017524	APTX	100	93.860	ENSCAFG00000001812	APTX	100	93.860	Canis_familiaris
ENSPPRG00000017524	APTX	100	93.860	ENSCAFG00020015598	APTX	100	93.860	Canis_lupus_dingo
ENSPPRG00000017524	APTX	100	89.181	ENSCHIG00000012896	APTX	100	89.181	Capra_hircus
ENSPPRG00000017524	APTX	100	90.643	ENSTSYG00000003041	APTX	100	90.643	Carlito_syrichta
ENSPPRG00000017524	APTX	70	90.244	ENSCAPG00000013470	APTX	100	90.244	Cavia_aperea
ENSPPRG00000017524	APTX	99	88.856	ENSCPOG00000005975	APTX	100	90.761	Cavia_porcellus
ENSPPRG00000017524	APTX	99	89.706	ENSCCAG00000036783	APTX	99	89.706	Cebus_capucinus
ENSPPRG00000017524	APTX	99	91.471	ENSCATG00000042639	APTX	99	90.461	Cercocebus_atys
ENSPPRG00000017524	APTX	100	85.965	ENSCLAG00000012185	APTX	100	89.674	Chinchilla_lanigera
ENSPPRG00000017524	APTX	99	92.059	ENSCSAG00000009885	APTX	96	92.059	Chlorocebus_sabaeus
ENSPPRG00000017524	APTX	100	65.156	ENSCPBG00000023973	APTX	98	65.439	Chrysemys_picta_bellii
ENSPPRG00000017524	APTX	92	45.673	ENSCING00000008741	-	94	40.390	Ciona_intestinalis
ENSPPRG00000017524	APTX	98	40.111	ENSCSAVG00000008038	-	97	40.111	Ciona_savignyi
ENSPPRG00000017524	APTX	99	90.588	ENSCANG00000037253	APTX	99	90.588	Colobus_angolensis_palliatus
ENSPPRG00000017524	APTX	99	85.294	ENSCGRG00001000705	Aptx	99	89.011	Cricetulus_griseus_chok1gshd
ENSPPRG00000017524	APTX	99	85.294	ENSCGRG00000014159	Aptx	99	89.011	Cricetulus_griseus_crigri
ENSPPRG00000017524	APTX	99	57.941	ENSCSEG00000009549	aptx	99	57.941	Cynoglossus_semilaevis
ENSPPRG00000017524	APTX	99	60.117	ENSCVAG00000011942	aptx	99	60.117	Cyprinodon_variegatus
ENSPPRG00000017524	APTX	99	57.647	ENSDARG00000027143	aptx	99	57.941	Danio_rerio
ENSPPRG00000017524	APTX	100	88.012	ENSDNOG00000018498	APTX	96	88.012	Dasypus_novemcinctus
ENSPPRG00000017524	APTX	100	83.965	ENSDORG00000002139	Aptx	100	89.674	Dipodomys_ordii
ENSPPRG00000017524	APTX	59	41.011	FBgn0038704	CG5316	87	47.541	Drosophila_melanogaster
ENSPPRG00000017524	APTX	82	83.929	ENSETEG00000012459	APTX	79	83.929	Echinops_telfairi
ENSPPRG00000017524	APTX	99	48.138	ENSEBUG00000013914	aptx	95	48.138	Eptatretus_burgeri
ENSPPRG00000017524	APTX	100	89.181	ENSEASG00005004566	APTX	100	89.181	Equus_asinus_asinus
ENSPPRG00000017524	APTX	100	89.181	ENSECAG00000012674	APTX	93	88.580	Equus_caballus
ENSPPRG00000017524	APTX	95	85.959	ENSEEUG00000010693	APTX	100	84.967	Erinaceus_europaeus
ENSPPRG00000017524	APTX	100	100.000	ENSFCAG00000008728	APTX	100	100.000	Felis_catus
ENSPPRG00000017524	APTX	99	64.348	ENSFALG00000001230	APTX	100	64.348	Ficedula_albicollis
ENSPPRG00000017524	APTX	100	83.041	ENSFDAG00000013752	APTX	100	89.506	Fukomys_damarensis
ENSPPRG00000017524	APTX	88	51.957	ENSFHEG00000021328	aptx	73	55.903	Fundulus_heteroclitus
ENSPPRG00000017524	APTX	99	57.227	ENSGMOG00000012505	aptx	99	57.227	Gadus_morhua
ENSPPRG00000017524	APTX	99	62.216	ENSGALG00000001954	APTX	100	62.216	Gallus_gallus
ENSPPRG00000017524	APTX	99	59.249	ENSGAFG00000005086	aptx	100	59.249	Gambusia_affinis
ENSPPRG00000017524	APTX	99	59.531	ENSGACG00000017887	aptx	99	59.531	Gasterosteus_aculeatus
ENSPPRG00000017524	APTX	99	65.909	ENSGAGG00000013230	APTX	100	66.193	Gopherus_agassizii
ENSPPRG00000017524	APTX	99	91.749	ENSGGOG00000014232	APTX	99	91.166	Gorilla_gorilla
ENSPPRG00000017524	APTX	99	61.765	ENSHBUG00000021058	aptx	100	61.765	Haplochromis_burtoni
ENSPPRG00000017524	APTX	100	84.795	ENSHGLG00000015093	APTX	100	89.831	Heterocephalus_glaber_female
ENSPPRG00000017524	APTX	100	86.257	ENSHGLG00100013482	APTX	100	89.831	Heterocephalus_glaber_male
ENSPPRG00000017524	APTX	99	59.587	ENSHCOG00000018216	aptx	96	59.587	Hippocampus_comes
ENSPPRG00000017524	APTX	99	60.411	ENSIPUG00000017548	aptx	99	60.411	Ictalurus_punctatus
ENSPPRG00000017524	APTX	99	85.924	ENSSTOG00000005185	APTX	100	90.761	Ictidomys_tridecemlineatus
ENSPPRG00000017524	APTX	99	81.416	ENSJJAG00000015653	Aptx	99	81.416	Jaculus_jaculus
ENSPPRG00000017524	APTX	99	59.649	ENSKMAG00000000117	aptx	100	59.649	Kryptolebias_marmoratus
ENSPPRG00000017524	APTX	99	54.213	ENSLBEG00000021489	APTX	99	54.688	Labrus_bergylta
ENSPPRG00000017524	APTX	99	60.465	ENSLBEG00000015353	aptx	99	60.465	Labrus_bergylta
ENSPPRG00000017524	APTX	100	61.453	ENSLACG00000003376	APTX	100	62.535	Latimeria_chalumnae
ENSPPRG00000017524	APTX	100	61.960	ENSLOCG00000011556	aptx	96	61.960	Lepisosteus_oculatus
ENSPPRG00000017524	APTX	100	90.936	ENSLAFG00000005665	APTX	99	90.936	Loxodonta_africana
ENSPPRG00000017524	APTX	99	91.765	ENSMFAG00000043141	APTX	99	90.461	Macaca_fascicularis
ENSPPRG00000017524	APTX	99	91.765	ENSMMUG00000007724	APTX	99	90.461	Macaca_mulatta
ENSPPRG00000017524	APTX	99	91.471	ENSMNEG00000042341	APTX	99	91.471	Macaca_nemestrina
ENSPPRG00000017524	APTX	99	91.176	ENSMLEG00000035137	APTX	99	91.176	Mandrillus_leucophaeus
ENSPPRG00000017524	APTX	99	59.357	ENSMAMG00000018377	aptx	100	59.357	Mastacembelus_armatus
ENSPPRG00000017524	APTX	99	61.471	ENSMZEG00005022621	aptx	100	61.471	Maylandia_zebra
ENSPPRG00000017524	APTX	60	72.928	ENSMGAG00000005736	APTX	100	72.928	Meleagris_gallopavo
ENSPPRG00000017524	APTX	99	84.615	ENSMAUG00000006039	Aptx	99	88.750	Mesocricetus_auratus
ENSPPRG00000017524	APTX	99	91.789	ENSMICG00000006603	APTX	97	91.789	Microcebus_murinus
ENSPPRG00000017524	APTX	99	84.956	ENSMOCG00000000869	Aptx	99	89.375	Microtus_ochrogaster
ENSPPRG00000017524	APTX	99	61.159	ENSMMOG00000007028	aptx	99	61.159	Mola_mola
ENSPPRG00000017524	APTX	100	62.286	ENSMODG00000003365	APTX	100	62.286	Monodelphis_domestica
ENSPPRG00000017524	APTX	99	55.556	ENSMALG00000003828	aptx	100	55.556	Monopterus_albus
ENSPPRG00000017524	APTX	81	88.462	MGP_CAROLIEiJ_G0025897	-	99	89.375	Mus_caroli
ENSPPRG00000017524	APTX	99	84.956	ENSMUSG00000028411	Aptx	99	90.625	Mus_musculus
ENSPPRG00000017524	APTX	99	84.366	MGP_PahariEiJ_G0024020	Aptx	99	84.366	Mus_pahari
ENSPPRG00000017524	APTX	99	84.956	MGP_SPRETEiJ_G0026846	Aptx	97	84.956	Mus_spretus
ENSPPRG00000017524	APTX	100	93.860	ENSMPUG00000004290	APTX	100	93.860	Mustela_putorius_furo
ENSPPRG00000017524	APTX	100	90.936	ENSMLUG00000016081	APTX	95	90.936	Myotis_lucifugus
ENSPPRG00000017524	APTX	100	84.795	ENSNGAG00000016314	Aptx	100	90.741	Nannospalax_galili
ENSPPRG00000017524	APTX	99	61.404	ENSNBRG00000014199	aptx	100	61.404	Neolamprologus_brichardi
ENSPPRG00000017524	APTX	99	92.059	ENSNLEG00000032184	APTX	99	92.059	Nomascus_leucogenys
ENSPPRG00000017524	APTX	100	63.873	ENSMEUG00000004153	APTX	99	63.873	Notamacropus_eugenii
ENSPPRG00000017524	APTX	99	81.639	ENSOPRG00000012403	APTX	99	81.639	Ochotona_princeps
ENSPPRG00000017524	APTX	95	78.893	ENSODEG00000000097	-	100	79.931	Octodon_degus
ENSPPRG00000017524	APTX	100	88.012	ENSODEG00000015832	-	100	89.130	Octodon_degus
ENSPPRG00000017524	APTX	99	60.411	ENSONIG00000014541	aptx	83	60.411	Oreochromis_niloticus
ENSPPRG00000017524	APTX	95	62.418	ENSOANG00000009878	APTX	98	62.418	Ornithorhynchus_anatinus
ENSPPRG00000017524	APTX	81	91.209	ENSOCUG00000025059	-	94	91.250	Oryctolagus_cuniculus
ENSPPRG00000017524	APTX	99	89.086	ENSOCUG00000000738	-	99	89.691	Oryctolagus_cuniculus
ENSPPRG00000017524	APTX	99	58.651	ENSORLG00000006237	aptx	100	58.651	Oryzias_latipes
ENSPPRG00000017524	APTX	99	59.012	ENSORLG00020021478	aptx	100	59.012	Oryzias_latipes_hni
ENSPPRG00000017524	APTX	99	58.772	ENSORLG00015021873	aptx	100	58.772	Oryzias_latipes_hsok
ENSPPRG00000017524	APTX	87	58.333	ENSOMEG00000007875	aptx	81	58.333	Oryzias_melastigma
ENSPPRG00000017524	APTX	99	89.706	ENSOGAG00000005388	APTX	96	89.706	Otolemur_garnettii
ENSPPRG00000017524	APTX	100	89.766	ENSOARG00000009598	APTX	96	89.766	Ovis_aries
ENSPPRG00000017524	APTX	99	92.647	ENSPPAG00000030295	APTX	99	91.447	Pan_paniscus
ENSPPRG00000017524	APTX	100	100.000	ENSPTIG00000020000	APTX	100	100.000	Panthera_tigris_altaica
ENSPPRG00000017524	APTX	99	92.647	ENSPTRG00000020850	APTX	99	92.647	Pan_troglodytes
ENSPPRG00000017524	APTX	99	91.471	ENSPANG00000025301	APTX	99	90.132	Papio_anubis
ENSPPRG00000017524	APTX	99	61.494	ENSPKIG00000013601	aptx	100	61.494	Paramormyrops_kingsleyae
ENSPPRG00000017524	APTX	100	67.055	ENSPSIG00000010521	APTX	96	67.055	Pelodiscus_sinensis
ENSPPRG00000017524	APTX	98	58.358	ENSPMGG00000018649	aptx	99	58.358	Periophthalmus_magnuspinnatus
ENSPPRG00000017524	APTX	99	87.316	ENSPEMG00000007747	Aptx	99	89.375	Peromyscus_maniculatus_bairdii
ENSPPRG00000017524	APTX	99	48.406	ENSPMAG00000008417	aptx	98	48.397	Petromyzon_marinus
ENSPPRG00000017524	APTX	99	68.661	ENSPCIG00000029852	APTX	100	68.661	Phascolarctos_cinereus
ENSPPRG00000017524	APTX	99	58.671	ENSPFOG00000004992	aptx	100	58.671	Poecilia_formosa
ENSPPRG00000017524	APTX	99	58.960	ENSPFOG00000005131	-	99	58.960	Poecilia_formosa
ENSPPRG00000017524	APTX	99	58.960	ENSPLAG00000007906	aptx	100	58.960	Poecilia_latipinna
ENSPPRG00000017524	APTX	99	58.960	ENSPLAG00000007960	APTX	100	58.960	Poecilia_latipinna
ENSPPRG00000017524	APTX	99	59.249	ENSPMEG00000018504	aptx	100	59.249	Poecilia_mexicana
ENSPPRG00000017524	APTX	99	58.960	ENSPMEG00000019789	APTX	100	58.960	Poecilia_mexicana
ENSPPRG00000017524	APTX	96	57.944	ENSPREG00000004375	aptx	100	57.944	Poecilia_reticulata
ENSPPRG00000017524	APTX	99	92.647	ENSPPYG00000019142	APTX	96	92.647	Pongo_abelii
ENSPPRG00000017524	APTX	100	75.146	ENSPCAG00000010014	APTX	99	75.146	Procavia_capensis
ENSPPRG00000017524	APTX	100	92.982	ENSPCOG00000016780	APTX	100	92.982	Propithecus_coquereli
ENSPPRG00000017524	APTX	100	89.181	ENSPVAG00000011468	APTX	97	89.181	Pteropus_vampyrus
ENSPPRG00000017524	APTX	99	61.765	ENSPNYG00000007675	aptx	100	61.765	Pundamilia_nyererei
ENSPPRG00000017524	APTX	99	58.824	ENSPNAG00000015984	aptx	99	58.824	Pygocentrus_nattereri
ENSPPRG00000017524	APTX	99	80.531	ENSRNOG00000006582	Aptx	99	80.531	Rattus_norvegicus
ENSPPRG00000017524	APTX	99	90.882	ENSRBIG00000042913	APTX	99	90.882	Rhinopithecus_bieti
ENSPPRG00000017524	APTX	99	90.588	ENSRROG00000035395	APTX	99	90.588	Rhinopithecus_roxellana
ENSPPRG00000017524	APTX	99	90.000	ENSSBOG00000025215	APTX	99	90.000	Saimiri_boliviensis_boliviensis
ENSPPRG00000017524	APTX	100	68.129	ENSSHAG00000012205	APTX	96	68.129	Sarcophilus_harrisii
ENSPPRG00000017524	APTX	99	63.456	ENSSFOG00015009267	aptx	100	63.456	Scleropages_formosus
ENSPPRG00000017524	APTX	99	60.997	ENSSMAG00000008839	aptx	100	60.997	Scophthalmus_maximus
ENSPPRG00000017524	APTX	99	61.584	ENSSDUG00000001989	aptx	100	61.584	Seriola_dumerili
ENSPPRG00000017524	APTX	99	61.584	ENSSLDG00000004915	aptx	100	61.584	Seriola_lalandi_dorsalis
ENSPPRG00000017524	APTX	100	64.023	ENSSPUG00000008994	APTX	87	64.023	Sphenodon_punctatus
ENSPPRG00000017524	APTX	99	62.170	ENSSPAG00000020373	aptx	100	62.170	Stegastes_partitus
ENSPPRG00000017524	APTX	100	90.643	ENSSSCG00000011001	APTX	100	90.643	Sus_scrofa
ENSPPRG00000017524	APTX	100	62.029	ENSTGUG00000001441	APTX	100	62.029	Taeniopygia_guttata
ENSPPRG00000017524	APTX	99	59.706	ENSTRUG00000009794	aptx	99	59.706	Takifugu_rubripes
ENSPPRG00000017524	APTX	99	60.641	ENSTNIG00000010570	aptx	99	60.641	Tetraodon_nigroviridis
ENSPPRG00000017524	APTX	100	82.749	ENSTBEG00000008504	APTX	99	82.051	Tupaia_belangeri
ENSPPRG00000017524	APTX	99	84.590	ENSTTRG00000007384	APTX	96	83.648	Tursiops_truncatus
ENSPPRG00000017524	APTX	100	94.152	ENSUAMG00000003700	APTX	100	93.789	Ursus_americanus
ENSPPRG00000017524	APTX	100	94.152	ENSUMAG00000005837	APTX	100	94.152	Ursus_maritimus
ENSPPRG00000017524	APTX	92	91.489	ENSVPAG00000001297	APTX	80	91.489	Vicugna_pacos
ENSPPRG00000017524	APTX	100	93.860	ENSVVUG00000021130	APTX	100	93.860	Vulpes_vulpes
ENSPPRG00000017524	APTX	99	60.684	ENSXETG00000024143	aptx	99	60.684	Xenopus_tropicalis
ENSPPRG00000017524	APTX	99	57.584	ENSXCOG00000005020	aptx	100	57.584	Xiphophorus_couchianus
ENSPPRG00000017524	APTX	99	59.538	ENSXMAG00000022086	aptx	97	59.538	Xiphophorus_maculatus