EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000017612 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 6124 bases
Position: chrKV860277.1:13808886-13815009
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000026696	zf-U11-48K	PF05253.12	8.8e-17	1	2
ENSPPRP00000026696	zf-U11-48K	PF05253.12	8.8e-17	2	2
ENSPPRP00000026682	zf-U11-48K	PF05253.12	9e-17	1	2
ENSPPRP00000026682	zf-U11-48K	PF05253.12	9e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000026866	-	516	-	ENSPPRP00000026696	171 (aa)	-	-
ENSPPRT00000026854	-	516	-	ENSPPRP00000026682	171 (aa)	-	-

Gene Model

Click here to download ENSPPRG00000017612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000017612's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000017612	-	91	88.623	ENSPPRG00000004344	-	100	88.623

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000017612	-	95	80.000	ENSG00000170627	GTSF1	100	83.832	Homo_sapiens
ENSPPRG00000017612	-	79	46.207	ENSAPOG00000022724	-	95	46.207	Acanthochromis_polyacanthus
ENSPPRG00000017612	-	88	88.889	ENSAMEG00000000939	GTSF1	96	88.889	Ailuropoda_melanoleuca
ENSPPRG00000017612	-	79	43.151	ENSAOCG00000022214	-	72	42.208	Amphiprion_ocellaris
ENSPPRG00000017612	-	68	51.562	ENSAPLG00000004814	GTSF1	95	51.562	Anas_platyrhynchos
ENSPPRG00000017612	-	88	56.173	ENSACAG00000014260	-	94	56.173	Anolis_carolinensis
ENSPPRG00000017612	-	61	45.536	ENSACAG00000029590	-	95	45.536	Anolis_carolinensis
ENSPPRG00000017612	-	91	83.234	ENSANAG00000024529	GTSF1	100	83.234	Aotus_nancymaae
ENSPPRG00000017612	-	91	86.826	ENSBTAG00000018085	GTSF1	100	86.826	Bos_taurus
ENSPPRG00000017612	-	91	83.832	ENSCJAG00000018968	-	100	83.832	Callithrix_jacchus
ENSPPRG00000017612	-	96	78.531	ENSCJAG00000039915	-	94	78.531	Callithrix_jacchus
ENSPPRG00000017612	-	91	88.623	ENSCAFG00000006465	-	100	88.623	Canis_familiaris
ENSPPRG00000017612	-	96	88.136	ENSCAFG00020020373	-	99	84.571	Canis_lupus_dingo
ENSPPRG00000017612	-	88	85.890	ENSCHIG00000012215	-	95	85.890	Capra_hircus
ENSPPRG00000017612	-	90	85.542	ENSTSYG00000004679	-	100	85.542	Carlito_syrichta
ENSPPRG00000017612	-	91	70.659	ENSTSYG00000035266	-	100	70.659	Carlito_syrichta
ENSPPRG00000017612	-	91	86.228	ENSCPOG00000008743	GTSF1	100	86.228	Cavia_porcellus
ENSPPRG00000017612	-	92	60.625	ENSCCAG00000032808	GTSF1	100	64.238	Cebus_capucinus
ENSPPRG00000017612	-	91	83.832	ENSCATG00000036328	GTSF1	100	83.832	Cercocebus_atys
ENSPPRG00000017612	-	96	82.486	ENSCLAG00000012811	GTSF1	100	85.629	Chinchilla_lanigera
ENSPPRG00000017612	-	85	82.278	ENSCSAG00000005394	GTSF1	100	82.278	Chlorocebus_sabaeus
ENSPPRG00000017612	-	91	86.826	ENSCHOG00000001659	GTSF1	100	86.826	Choloepus_hoffmanni
ENSPPRG00000017612	-	91	48.810	ENSCPBG00000024905	-	91	48.810	Chrysemys_picta_bellii
ENSPPRG00000017612	-	94	60.920	ENSCPBG00000005134	-	75	60.920	Chrysemys_picta_bellii
ENSPPRG00000017612	-	91	82.635	ENSCANG00000033118	GTSF1	100	82.635	Colobus_angolensis_palliatus
ENSPPRG00000017612	-	91	78.443	ENSCANG00000031776	-	100	78.443	Colobus_angolensis_palliatus
ENSPPRG00000017612	-	91	87.425	ENSCGRG00001013814	Gtsf1	100	87.425	Cricetulus_griseus_chok1gshd
ENSPPRG00000017612	-	91	87.425	ENSCGRG00000007733	Gtsf1	100	87.425	Cricetulus_griseus_crigri
ENSPPRG00000017612	-	85	86.624	ENSDNOG00000001438	-	78	86.624	Dasypus_novemcinctus
ENSPPRG00000017612	-	91	87.425	ENSDORG00000003228	Gtsf1	100	87.425	Dipodomys_ordii
ENSPPRG00000017612	-	91	86.747	ENSETEG00000009310	GTSF1	100	86.747	Echinops_telfairi
ENSPPRG00000017612	-	96	87.006	ENSEASG00005010260	GTSF1	95	87.006	Equus_asinus_asinus
ENSPPRG00000017612	-	91	87.425	ENSECAG00000013618	GTSF1	100	87.425	Equus_caballus
ENSPPRG00000017612	-	91	88.623	ENSEEUG00000005185	GTSF1	100	88.623	Erinaceus_europaeus
ENSPPRG00000017612	-	100	73.184	ENSFCAG00000023672	-	100	73.184	Felis_catus
ENSPPRG00000017612	-	94	87.861	ENSFCAG00000010156	-	100	88.623	Felis_catus
ENSPPRG00000017612	-	66	48.413	ENSFALG00000007613	-	100	48.413	Ficedula_albicollis
ENSPPRG00000017612	-	96	80.791	ENSFDAG00000009383	GTSF1	100	83.234	Fukomys_damarensis
ENSPPRG00000017612	-	87	48.780	ENSGALG00000001109	GTSF1	99	48.780	Gallus_gallus
ENSPPRG00000017612	-	79	46.575	ENSGACG00000010783	-	80	46.575	Gasterosteus_aculeatus
ENSPPRG00000017612	-	54	48.113	ENSGAGG00000016342	-	99	48.113	Gopherus_agassizii
ENSPPRG00000017612	-	91	54.491	ENSGAGG00000011062	GTSF1	87	54.491	Gopherus_agassizii
ENSPPRG00000017612	-	91	83.832	ENSGGOG00000016063	GTSF1	100	83.832	Gorilla_gorilla
ENSPPRG00000017612	-	96	81.356	ENSHGLG00000002436	GTSF1	100	83.832	Heterocephalus_glaber_female
ENSPPRG00000017612	-	96	81.356	ENSHGLG00100017301	GTSF1	100	83.832	Heterocephalus_glaber_male
ENSPPRG00000017612	-	87	44.444	ENSIPUG00000002483	-	84	44.654	Ictalurus_punctatus
ENSPPRG00000017612	-	98	85.714	ENSSTOG00000025170	GTSF1	100	88.024	Ictidomys_tridecemlineatus
ENSPPRG00000017612	-	91	77.844	ENSJJAG00000017442	-	100	77.844	Jaculus_jaculus
ENSPPRG00000017612	-	94	80.925	ENSJJAG00000003323	-	100	83.832	Jaculus_jaculus
ENSPPRG00000017612	-	79	46.897	ENSKMAG00000006038	-	80	46.897	Kryptolebias_marmoratus
ENSPPRG00000017612	-	85	56.962	ENSLACG00000008870	GTSF1	82	56.962	Latimeria_chalumnae
ENSPPRG00000017612	-	88	89.506	ENSLAFG00000016318	GTSF1	97	89.506	Loxodonta_africana
ENSPPRG00000017612	-	91	83.832	ENSMFAG00000041178	GTSF1	100	83.832	Macaca_fascicularis
ENSPPRG00000017612	-	96	84.181	ENSMMUG00000003758	GTSF1	100	83.832	Macaca_mulatta
ENSPPRG00000017612	-	91	83.832	ENSMNEG00000036779	GTSF1	100	83.832	Macaca_nemestrina
ENSPPRG00000017612	-	91	83.234	ENSMLEG00000028375	GTSF1	100	83.234	Mandrillus_leucophaeus
ENSPPRG00000017612	-	71	49.635	ENSMGAG00000000685	GTSF1	95	49.635	Meleagris_gallopavo
ENSPPRG00000017612	-	91	74.359	ENSMAUG00000018746	Gtsf1	99	74.359	Mesocricetus_auratus
ENSPPRG00000017612	-	91	88.623	ENSMICG00000008444	-	100	88.623	Microcebus_murinus
ENSPPRG00000017612	-	91	86.826	ENSMOCG00000018889	Gtsf1	100	86.826	Microtus_ochrogaster
ENSPPRG00000017612	-	91	78.443	ENSMODG00000019422	GTSF1	100	78.443	Monodelphis_domestica
ENSPPRG00000017612	-	99	81.967	MGP_CAROLIEiJ_G0020379	Gtsf1	100	86.826	Mus_caroli
ENSPPRG00000017612	-	99	81.967	ENSMUSG00000022487	Gtsf1	100	86.826	Mus_musculus
ENSPPRG00000017612	-	98	82.320	MGP_PahariEiJ_G0020378	Gtsf1	100	86.228	Mus_pahari
ENSPPRG00000017612	-	99	81.967	MGP_SPRETEiJ_G0021272	Gtsf1	100	86.826	Mus_spretus
ENSPPRG00000017612	-	91	87.425	ENSMPUG00000019323	-	100	87.425	Mustela_putorius_furo
ENSPPRG00000017612	-	89	88.415	ENSMPUG00000005669	-	98	88.415	Mustela_putorius_furo
ENSPPRG00000017612	-	91	80.240	ENSMPUG00000019140	-	100	80.240	Mustela_putorius_furo
ENSPPRG00000017612	-	91	86.826	ENSMLUG00000012961	-	100	86.826	Myotis_lucifugus
ENSPPRG00000017612	-	91	83.832	ENSMLUG00000026557	-	100	83.832	Myotis_lucifugus
ENSPPRG00000017612	-	96	83.051	ENSNGAG00000014213	Gtsf1	100	86.228	Nannospalax_galili
ENSPPRG00000017612	-	91	83.234	ENSNLEG00000017635	GTSF1	100	83.234	Nomascus_leucogenys
ENSPPRG00000017612	-	91	67.665	ENSMEUG00000016206	GTSF1	100	67.665	Notamacropus_eugenii
ENSPPRG00000017612	-	91	60.479	ENSOPRG00000017277	GTSF1	100	60.479	Ochotona_princeps
ENSPPRG00000017612	-	91	86.228	ENSODEG00000014220	GTSF1	100	86.228	Octodon_degus
ENSPPRG00000017612	-	89	61.818	ENSOANG00000011386	GTSF1	99	61.818	Ornithorhynchus_anatinus
ENSPPRG00000017612	-	91	86.826	ENSOCUG00000024495	GTSF1	100	86.826	Oryctolagus_cuniculus
ENSPPRG00000017612	-	67	43.802	ENSORLG00015005017	-	71	47.321	Oryzias_latipes_hsok
ENSPPRG00000017612	-	92	83.432	ENSOGAG00000017227	GTSF1	99	83.432	Otolemur_garnettii
ENSPPRG00000017612	-	91	87.425	ENSOARG00000016162	GTSF1	100	87.425	Ovis_aries
ENSPPRG00000017612	-	91	83.832	ENSPPAG00000028506	GTSF1	100	83.832	Pan_paniscus
ENSPPRG00000017612	-	91	88.623	ENSPTIG00000020415	-	100	88.623	Panthera_tigris_altaica
ENSPPRG00000017612	-	100	98.246	ENSPTIG00000010868	-	100	98.246	Panthera_tigris_altaica
ENSPPRG00000017612	-	95	80.000	ENSPTRG00000005041	GTSF1	100	83.832	Pan_troglodytes
ENSPPRG00000017612	-	91	83.832	ENSPANG00000020579	GTSF1	100	83.832	Papio_anubis
ENSPPRG00000017612	-	74	41.060	ENSPSIG00000009839	-	93	41.060	Pelodiscus_sinensis
ENSPPRG00000017612	-	94	58.960	ENSPSIG00000009968	GTSF1	85	58.960	Pelodiscus_sinensis
ENSPPRG00000017612	-	91	87.425	ENSPEMG00000009595	Gtsf1	100	87.425	Peromyscus_maniculatus_bairdii
ENSPPRG00000017612	-	91	75.449	ENSPCIG00000006731	GTSF1	100	75.449	Phascolarctos_cinereus
ENSPPRG00000017612	-	91	83.832	ENSPPYG00000004605	GTSF1	100	83.832	Pongo_abelii
ENSPPRG00000017612	-	91	88.024	ENSPCOG00000016907	-	100	88.024	Propithecus_coquereli
ENSPPRG00000017612	-	88	76.543	ENSPCOG00000015201	-	99	75.148	Propithecus_coquereli
ENSPPRG00000017612	-	91	88.623	ENSPVAG00000000333	GTSF1	100	88.623	Pteropus_vampyrus
ENSPPRG00000017612	-	81	46.053	ENSPNAG00000005737	-	82	46.053	Pygocentrus_nattereri
ENSPPRG00000017612	-	96	83.616	ENSRNOG00000036831	Gtsf1	94	83.616	Rattus_norvegicus
ENSPPRG00000017612	-	91	83.234	ENSRBIG00000043438	-	100	83.234	Rhinopithecus_bieti
ENSPPRG00000017612	-	96	76.836	ENSRBIG00000039916	-	94	76.836	Rhinopithecus_bieti
ENSPPRG00000017612	-	91	83.832	ENSRROG00000008137	GTSF1	100	83.832	Rhinopithecus_roxellana
ENSPPRG00000017612	-	91	84.431	ENSSBOG00000029460	GTSF1	100	84.431	Saimiri_boliviensis_boliviensis
ENSPPRG00000017612	-	91	78.443	ENSSHAG00000011633	GTSF1	100	78.443	Sarcophilus_harrisii
ENSPPRG00000017612	-	69	85.385	ENSSARG00000004928	GTSF1	78	85.385	Sorex_araneus
ENSPPRG00000017612	-	88	46.753	ENSSPUG00000010064	GTSF1	93	60.909	Sphenodon_punctatus
ENSPPRG00000017612	-	91	88.024	ENSSSCG00000026333	GTSF1	100	88.024	Sus_scrofa
ENSPPRG00000017612	-	67	50.781	ENSTGUG00000002008	-	100	50.781	Taeniopygia_guttata
ENSPPRG00000017612	-	87	86.335	ENSTBEG00000006154	GTSF1	100	86.335	Tupaia_belangeri
ENSPPRG00000017612	-	91	85.629	ENSTTRG00000004470	GTSF1	100	85.629	Tursiops_truncatus
ENSPPRG00000017612	-	96	88.136	ENSUAMG00000021669	GTSF1	99	85.143	Ursus_americanus
ENSPPRG00000017612	-	91	89.222	ENSUMAG00000011279	GTSF1	100	89.222	Ursus_maritimus
ENSPPRG00000017612	-	91	87.425	ENSVPAG00000007016	GTSF1	100	87.425	Vicugna_pacos
ENSPPRG00000017612	-	99	86.188	ENSVVUG00000023687	-	91	86.188	Vulpes_vulpes
ENSPPRG00000017612	-	95	53.409	ENSXETG00000033546	gtsf1	78	53.409	Xenopus_tropicalis