EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000017741 (Gene tree)
Gene ID: 109265597
Gene Symbol: TNRC6B
Alias: -
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 182638 bases
Position: chrKV860285.1:24988928-25171565
Accession: 109265597
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000026473	Ago_hook	PF10427.9	4.5e-21	1	1
ENSPPRP00000026445	Ago_hook	PF10427.9	1.6e-19	1	1
ENSPPRP00000026441	Ago_hook	PF10427.9	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000026376	TNRC6B-202	5502	XM_019446959	ENSPPRP00000026445	1833 (aa)	XP_019302504	-
ENSPPRT00000026425	TNRC6B-203	3090	XM_019446956	ENSPPRP00000026473	1029 (aa)	XP_019302501	-
ENSPPRT00000026362	TNRC6B-201	5172	-	ENSPPRP00000026441	1723 (aa)	-	-

Gene Model

Click here to download ENSPPRG00000017741's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000017741's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000017741	TNRC6B	98	40.522	ENSPPRG00000018881	TNRC6C	95	40.956
ENSPPRG00000017741	TNRC6B	93	47.436	ENSPPRG00000005861	TNRC6A	97	36.346

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000017741	TNRC6B	100	98.251	ENSG00000100354	TNRC6B	100	100.000	Homo_sapiens
ENSPPRG00000017741	TNRC6B	99	99.072	ENSAMEG00000011025	TNRC6B	99	99.072	Ailuropoda_melanoleuca
ENSPPRG00000017741	TNRC6B	98	88.471	ENSAPLG00000009347	TNRC6B	100	88.471	Anas_platyrhynchos
ENSPPRG00000017741	TNRC6B	95	86.052	ENSACAG00000007281	TNRC6B	99	70.611	Anolis_carolinensis
ENSPPRG00000017741	TNRC6B	100	98.154	ENSANAG00000035042	TNRC6B	100	98.154	Aotus_nancymaae
ENSPPRG00000017741	TNRC6B	89	63.953	ENSAMXG00000008707	tnrc6b	82	44.550	Astyanax_mexicanus
ENSPPRG00000017741	TNRC6B	100	96.815	ENSBTAG00000021076	TNRC6B	100	96.895	Bos_taurus
ENSPPRG00000017741	TNRC6B	100	97.961	ENSCJAG00000002732	TNRC6B	99	99.718	Callithrix_jacchus
ENSPPRG00000017741	TNRC6B	99	98.899	ENSCAFG00000001255	TNRC6B	100	98.899	Canis_familiaris
ENSPPRG00000017741	TNRC6B	99	98.585	ENSCAFG00020002189	TNRC6B	99	96.921	Canis_lupus_dingo
ENSPPRG00000017741	TNRC6B	98	97.762	ENSCHIG00000003491	TNRC6B	99	93.438	Capra_hircus
ENSPPRG00000017741	TNRC6B	100	97.570	ENSTSYG00000011836	TNRC6B	100	97.570	Carlito_syrichta
ENSPPRG00000017741	TNRC6B	100	95.897	ENSCPOG00000005705	TNRC6B	98	96.067	Cavia_porcellus
ENSPPRG00000017741	TNRC6B	100	96.236	ENSCCAG00000019912	TNRC6B	100	96.236	Cebus_capucinus
ENSPPRG00000017741	TNRC6B	100	97.087	ENSCATG00000029291	TNRC6B	100	97.087	Cercocebus_atys
ENSPPRG00000017741	TNRC6B	100	96.475	ENSCLAG00000016942	TNRC6B	97	92.599	Chinchilla_lanigera
ENSPPRG00000017741	TNRC6B	99	90.147	ENSCSAG00000006021	TNRC6B	99	88.371	Chlorocebus_sabaeus
ENSPPRG00000017741	TNRC6B	71	98.535	ENSCHOG00000010004	-	72	98.535	Choloepus_hoffmanni
ENSPPRG00000017741	TNRC6B	92	87.355	ENSCPBG00000022932	TNRC6B	99	87.123	Chrysemys_picta_bellii
ENSPPRG00000017741	TNRC6B	100	97.670	ENSCANG00000030776	TNRC6B	100	97.670	Colobus_angolensis_palliatus
ENSPPRG00000017741	TNRC6B	93	95.019	ENSCGRG00001020166	Tnrc6b	97	91.662	Cricetulus_griseus_chok1gshd
ENSPPRG00000017741	TNRC6B	100	95.176	ENSCGRG00000016696	Tnrc6b	99	91.864	Cricetulus_griseus_crigri
ENSPPRG00000017741	TNRC6B	100	96.927	ENSDNOG00000012744	TNRC6B	99	96.401	Dasypus_novemcinctus
ENSPPRG00000017741	TNRC6B	100	95.597	ENSDORG00000003386	Tnrc6b	97	95.560	Dipodomys_ordii
ENSPPRG00000017741	TNRC6B	99	88.098	ENSETEG00000006570	TNRC6B	99	88.448	Echinops_telfairi
ENSPPRG00000017741	TNRC6B	99	98.465	ENSEASG00005005306	TNRC6B	99	97.375	Equus_asinus_asinus
ENSPPRG00000017741	TNRC6B	100	98.937	ENSECAG00000009759	TNRC6B	100	100.000	Equus_caballus
ENSPPRG00000017741	TNRC6B	75	97.802	ENSEEUG00000008690	-	62	97.802	Erinaceus_europaeus
ENSPPRG00000017741	TNRC6B	52	63.576	ENSELUG00000019468	-	71	63.487	Esox_lucius
ENSPPRG00000017741	TNRC6B	100	99.620	ENSFCAG00000004791	TNRC6B	100	99.620	Felis_catus
ENSPPRG00000017741	TNRC6B	95	85.908	ENSFALG00000012195	TNRC6B	100	84.769	Ficedula_albicollis
ENSPPRG00000017741	TNRC6B	100	96.235	ENSFDAG00000021368	TNRC6B	97	92.990	Fukomys_damarensis
ENSPPRG00000017741	TNRC6B	95	92.308	ENSGALG00000012050	TNRC6B	97	85.876	Gallus_gallus
ENSPPRG00000017741	TNRC6B	99	88.974	ENSGAGG00000025188	TNRC6B	98	88.592	Gopherus_agassizii
ENSPPRG00000017741	TNRC6B	100	98.251	ENSGGOG00000008444	TNRC6B	100	98.251	Gorilla_gorilla
ENSPPRG00000017741	TNRC6B	100	96.143	ENSHGLG00000009306	TNRC6B	100	96.143	Heterocephalus_glaber_female
ENSPPRG00000017741	TNRC6B	100	96.690	ENSHGLG00100018108	TNRC6B	98	92.861	Heterocephalus_glaber_male
ENSPPRG00000017741	TNRC6B	89	57.522	ENSIPUG00000001515	tnrc6b	93	49.454	Ictalurus_punctatus
ENSPPRG00000017741	TNRC6B	100	97.045	ENSSTOG00000008927	TNRC6B	97	93.824	Ictidomys_tridecemlineatus
ENSPPRG00000017741	TNRC6B	100	95.760	ENSJJAG00000015779	Tnrc6b	97	92.025	Jaculus_jaculus
ENSPPRG00000017741	TNRC6B	96	78.808	ENSLACG00000000628	-	99	61.449	Latimeria_chalumnae
ENSPPRG00000017741	TNRC6B	82	96.458	ENSLAFG00000014473	TNRC6B	100	95.936	Loxodonta_africana
ENSPPRG00000017741	TNRC6B	100	97.184	ENSMFAG00000003862	TNRC6B	100	97.184	Macaca_fascicularis
ENSPPRG00000017741	TNRC6B	100	98.058	ENSMMUG00000021345	TNRC6B	100	98.058	Macaca_mulatta
ENSPPRG00000017741	TNRC6B	99	97.196	ENSMNEG00000042745	TNRC6B	100	97.196	Macaca_nemestrina
ENSPPRG00000017741	TNRC6B	100	98.058	ENSMLEG00000041780	TNRC6B	100	98.058	Mandrillus_leucophaeus
ENSPPRG00000017741	TNRC6B	99	89.766	ENSMGAG00000012333	TNRC6B	99	89.387	Meleagris_gallopavo
ENSPPRG00000017741	TNRC6B	100	95.412	ENSMAUG00000016123	Tnrc6b	98	91.638	Mesocricetus_auratus
ENSPPRG00000017741	TNRC6B	100	97.674	ENSMICG00000014056	TNRC6B	100	97.674	Microcebus_murinus
ENSPPRG00000017741	TNRC6B	96	95.500	ENSMOCG00000020334	Tnrc6b	97	95.500	Microtus_ochrogaster
ENSPPRG00000017741	TNRC6B	65	80.645	ENSMMOG00000002799	si:dkey-217f16.6	58	80.645	Mola_mola
ENSPPRG00000017741	TNRC6B	100	94.824	MGP_CAROLIEiJ_G0020043	Tnrc6b	97	91.582	Mus_caroli
ENSPPRG00000017741	TNRC6B	100	94.941	ENSMUSG00000047888	Tnrc6b	99	94.600	Mus_musculus
ENSPPRG00000017741	TNRC6B	100	94.471	MGP_PahariEiJ_G0020045	Tnrc6b	97	91.408	Mus_pahari
ENSPPRG00000017741	TNRC6B	100	95.059	MGP_SPRETEiJ_G0020941	Tnrc6b	97	95.074	Mus_spretus
ENSPPRG00000017741	TNRC6B	96	98.855	ENSMPUG00000016442	TNRC6B	100	94.840	Mustela_putorius_furo
ENSPPRG00000017741	TNRC6B	99	97.380	ENSMLUG00000008765	TNRC6B	99	97.380	Myotis_lucifugus
ENSPPRG00000017741	TNRC6B	100	95.193	ENSNGAG00000021294	Tnrc6b	97	91.648	Nannospalax_galili
ENSPPRG00000017741	TNRC6B	100	98.445	ENSNLEG00000015311	TNRC6B	100	98.445	Nomascus_leucogenys
ENSPPRG00000017741	TNRC6B	99	90.550	ENSOPRG00000012054	TNRC6B	88	94.011	Ochotona_princeps
ENSPPRG00000017741	TNRC6B	100	96.362	ENSODEG00000013146	TNRC6B	97	93.055	Octodon_degus
ENSPPRG00000017741	TNRC6B	94	59.504	ENSONIG00000019679	-	99	39.990	Oreochromis_niloticus
ENSPPRG00000017741	TNRC6B	100	97.163	ENSOCUG00000016128	TNRC6B	97	92.918	Oryctolagus_cuniculus
ENSPPRG00000017741	TNRC6B	100	96.788	ENSOGAG00000011096	TNRC6B	100	96.788	Otolemur_garnettii
ENSPPRG00000017741	TNRC6B	100	97.076	ENSOARG00000017238	TNRC6B	97	93.360	Ovis_aries
ENSPPRG00000017741	TNRC6B	100	98.251	ENSPPAG00000028514	TNRC6B	100	98.251	Pan_paniscus
ENSPPRG00000017741	TNRC6B	99	95.348	ENSPTIG00000022064	TNRC6B	99	95.348	Panthera_tigris_altaica
ENSPPRG00000017741	TNRC6B	100	98.251	ENSPTRG00000047826	TNRC6B	100	98.251	Pan_troglodytes
ENSPPRG00000017741	TNRC6B	98	91.395	ENSPANG00000009271	TNRC6B	99	91.528	Papio_anubis
ENSPPRG00000017741	TNRC6B	95	90.471	ENSPSIG00000005318	TNRC6B	99	85.145	Pelodiscus_sinensis
ENSPPRG00000017741	TNRC6B	100	94.138	ENSPEMG00000011403	Tnrc6b	97	91.201	Peromyscus_maniculatus_bairdii
ENSPPRG00000017741	TNRC6B	94	92.671	ENSPCIG00000020347	TNRC6B	99	87.762	Phascolarctos_cinereus
ENSPPRG00000017741	TNRC6B	95	52.555	ENSPFOG00000006033	-	58	53.333	Poecilia_formosa
ENSPPRG00000017741	TNRC6B	88	61.111	ENSPLAG00000001418	-	89	46.970	Poecilia_latipinna
ENSPPRG00000017741	TNRC6B	71	67.470	ENSPMEG00000006371	-	56	54.502	Poecilia_mexicana
ENSPPRG00000017741	TNRC6B	100	97.098	ENSPPYG00000011849	TNRC6B	100	97.098	Pongo_abelii
ENSPPRG00000017741	TNRC6B	95	87.452	ENSPCAG00000008739	TNRC6B	75	91.515	Procavia_capensis
ENSPPRG00000017741	TNRC6B	100	97.965	ENSPCOG00000020790	TNRC6B	100	97.965	Propithecus_coquereli
ENSPPRG00000017741	TNRC6B	94	96.706	ENSPVAG00000004975	TNRC6B	92	96.296	Pteropus_vampyrus
ENSPPRG00000017741	TNRC6B	86	54.070	ENSPNAG00000011713	tnrc6b	80	44.903	Pygocentrus_nattereri
ENSPPRG00000017741	TNRC6B	100	94.179	ENSRNOG00000024907	Tnrc6b	97	91.226	Rattus_norvegicus
ENSPPRG00000017741	TNRC6B	100	97.001	ENSRBIG00000035576	TNRC6B	100	97.833	Rhinopithecus_bieti
ENSPPRG00000017741	TNRC6B	100	97.767	ENSRROG00000031135	TNRC6B	100	97.767	Rhinopithecus_roxellana
ENSPPRG00000017741	TNRC6B	99	97.430	ENSSBOG00000029743	TNRC6B	100	97.430	Saimiri_boliviensis_boliviensis
ENSPPRG00000017741	TNRC6B	99	87.760	ENSSHAG00000009692	TNRC6B	99	87.869	Sarcophilus_harrisii
ENSPPRG00000017741	TNRC6B	74	86.316	ENSSARG00000007971	-	70	95.455	Sorex_araneus
ENSPPRG00000017741	TNRC6B	92	88.361	ENSSPUG00000010801	TNRC6B	100	88.005	Sphenodon_punctatus
ENSPPRG00000017741	TNRC6B	100	98.463	ENSSSCG00000000078	TNRC6B	98	97.762	Sus_scrofa
ENSPPRG00000017741	TNRC6B	93	88.342	ENSTGUG00000010138	-	99	88.030	Taeniopygia_guttata
ENSPPRG00000017741	TNRC6B	99	94.890	ENSTTRG00000011465	TNRC6B	96	99.162	Tursiops_truncatus
ENSPPRG00000017741	TNRC6B	99	97.672	ENSUAMG00000007174	TNRC6B	99	97.672	Ursus_americanus
ENSPPRG00000017741	TNRC6B	99	96.034	ENSUMAG00000014336	TNRC6B	100	95.506	Ursus_maritimus
ENSPPRG00000017741	TNRC6B	82	92.553	ENSVPAG00000001467	TNRC6B	72	92.208	Vicugna_pacos
ENSPPRG00000017741	TNRC6B	100	99.057	ENSVVUG00000007064	TNRC6B	98	98.911	Vulpes_vulpes
ENSPPRG00000017741	TNRC6B	72	50.128	ENSXCOG00000003042	-	97	37.204	Xiphophorus_couchianus